RNA–Protein interactions for RNA: ENST00000505971.5

TRIO-207, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-207ENST00000505971 LRIT3Q3SXY7 679 aa24.43■■□□□ 1.5
TRIO-207ENST00000505971 GPR153Q6NV75 609 aa24.43■■□□□ 1.5
TRIO-207ENST00000505971 APPBP2Q92624 585 aa24.43■■□□□ 1.5
TRIO-207ENST00000505971 FBXO28Q9NVF7 368 aa24.43■■□□□ 1.5
TRIO-207ENST00000505971 ROBO3Q96MS0 1386 aa24.42■■□□□ 1.5
TRIO-207ENST00000505971 RASA1P20936 1047 aa24.42■■□□□ 1.5
TRIO-207ENST00000505971 NCAPG2Q86XI2 1143 aa24.42■■□□□ 1.5
TRIO-207ENST00000505971 RIOX2Q8IUF8 465 aa24.42■■□□□ 1.5
TRIO-207ENST00000505971 REPS2Q8NFH8 660 aa24.42■■□□□ 1.5
TRIO-207ENST00000505971 SENP6Q9GZR1 1112 aaPredicted RBP24.42■■□□□ 1.5
TRIO-207ENST00000505971 SLC5A4Q9NY91 659 aa24.42■■□□□ 1.5
TRIO-207ENST00000505971 VWA5AO00534 786 aa24.41■■□□□ 1.5
TRIO-207ENST00000505971 RNF113AO15541 343 aaKnown RBP24.41■■□□□ 1.5
TRIO-207ENST00000505971 SEPT4O43236 478 aa24.41■■□□□ 1.5
TRIO-207ENST00000505971 PLS1Q14651 629 aa24.41■■□□□ 1.5
TRIO-207ENST00000505971 MAML3Q96JK9 1138 aa24.41■■□□□ 1.5
TRIO-207ENST00000505971 GOPCQ9HD26 462 aa24.41■■□□□ 1.5
TRIO-207ENST00000505971 ZNF214Q9UL59 606 aaPredicted RBP24.41■■□□□ 1.5
TRIO-207ENST00000505971 PPP1R9AQ9ULJ8 1098 aa24.41■■□□□ 1.5
TRIO-207ENST00000505971 ZFYP08048 801 aaPredicted RBP24.4■■□□□ 1.5
TRIO-207ENST00000505971 FCER1AP12319 257 aa24.4■■□□□ 1.5
TRIO-207ENST00000505971 TSHZ3Q63HK5 1081 aa24.4■■□□□ 1.5
TRIO-207ENST00000505971 TDHQ8IZJ6 230 aa24.4■■□□□ 1.5
TRIO-207ENST00000505971 GPATCH3Q96I76 525 aa24.4■■□□□ 1.5
TRIO-207ENST00000505971 EPB41L4AQ9HCS5 686 aaPredicted RBP24.4■■□□□ 1.5
TRIO-207ENST00000505971 NYAP2Q9P242 653 aa24.4■■□□□ 1.5
TRIO-207ENST00000505971 IGKV6D-41A0A0C4DH26 115 aa24.39■■□□□ 1.49
TRIO-207ENST00000505971 ARRDC4Q8NCT1 418 aa24.39■■□□□ 1.49
TRIO-207ENST00000505971 PLXNA1Q9UIW2 1896 aa24.38■■□□□ 1.49
TRIO-207ENST00000505971 GPAA1O43292 621 aa24.38■■□□□ 1.49
TRIO-207ENST00000505971 STAT3P40763 770 aa24.38■■□□□ 1.49
TRIO-207ENST00000505971 FAM83BQ5T0W9 1011 aa24.38■■□□□ 1.49
TRIO-207ENST00000505971 UBE2OQ9C0C9 1292 aaKnown RBP24.38■■□□□ 1.49
TRIO-207ENST00000505971 NRBP1Q9UHY1 535 aa24.38■■□□□ 1.49
TRIO-207ENST00000505971 DIS3Q9Y2L1 958 aaKnown RBP24.38■■□□□ 1.49
TRIO-207ENST00000505971 PCDHB15Q9Y5E8 787 aa24.38■■□□□ 1.49
TRIO-207ENST00000505971 LAMA2P24043 3122 aaKnown RBP24.38■■□□□ 1.49
TRIO-207ENST00000505971 TTC41PQ6P2S7 1318 aa24.37■■□□□ 1.49
TRIO-207ENST00000505971 GNAT2P19087 354 aa24.37■■□□□ 1.49
TRIO-207ENST00000505971 ZNF792Q3KQV3 632 aa24.37■■□□□ 1.49
TRIO-207ENST00000505971 PRAMEF19Q5SWL8 479 aa24.37■■□□□ 1.49
TRIO-207ENST00000505971 MKL1Q969V6 931 aa24.37■■□□□ 1.49
TRIO-207ENST00000505971 MYH4Q9Y623 1939 aa24.36■■□□□ 1.49
TRIO-207ENST00000505971 MINDY4BA8MYZ0 360 aa24.36■■□□□ 1.49
TRIO-207ENST00000505971 F5H6K3 240 aa24.36■■□□□ 1.49
TRIO-207ENST00000505971 M0R2C6 588 aa24.36■■□□□ 1.49
TRIO-207ENST00000505971 KLRC3Q07444 240 aa24.36■■□□□ 1.49
TRIO-207ENST00000505971 GJC2Q5T442 439 aaPredicted RBP24.36■■□□□ 1.49
TRIO-207ENST00000505971 PI4K2BQ8TCG2 481 aa24.36■■□□□ 1.49
TRIO-207ENST00000505971 MKNK2Q9HBH9 465 aa24.36■■□□□ 1.49
TRIO-207ENST00000505971 PATL2C9JE40 543 aaKnown RBP24.35■■□□□ 1.49
TRIO-207ENST00000505971 COPB2P35606 906 aa24.35■■□□□ 1.49
TRIO-207ENST00000505971 SNX17Q15036 470 aa24.35■■□□□ 1.49
TRIO-207ENST00000505971 MMP19Q99542 508 aa24.35■■□□□ 1.49
TRIO-207ENST00000505971 NDUFB10O96000 172 aa24.34■■□□□ 1.49
TRIO-207ENST00000505971 ATN1P54259 1190 aaPredicted RBP24.34■■□□□ 1.49
TRIO-207ENST00000505971 ANO1Q5XXA6 986 aa24.34■■□□□ 1.49
TRIO-207ENST00000505971 SAMD1Q6SPF0 538 aaPredicted RBP24.34■■□□□ 1.49
TRIO-207ENST00000505971 SLC39A5Q6ZMH5 540 aa24.34■■□□□ 1.49
TRIO-207ENST00000505971 IFNL3Q8IZI9 196 aa24.34■■□□□ 1.49
TRIO-207ENST00000505971 SLF1Q9BQI6 1058 aa24.34■■□□□ 1.49
TRIO-207ENST00000505971 TINF2Q9BSI4 451 aa24.34■■□□□ 1.49
TRIO-207ENST00000505971 SYNPO2Q9UMS6 1093 aa24.34■■□□□ 1.49
TRIO-207ENST00000505971 ATP2A1O14983 1001 aa24.33■■□□□ 1.49
TRIO-207ENST00000505971 PGK2P07205 417 aa24.33■■□□□ 1.49
TRIO-207ENST00000505971 RTP1P59025 263 aa24.33■■□□□ 1.49
TRIO-207ENST00000505971 MDM2Q00987 491 aaPredicted RBP24.33■■□□□ 1.49
TRIO-207ENST00000505971 KCTD2Q14681 263 aa24.33■■□□□ 1.49
TRIO-207ENST00000505971 C1orf53Q5VUE5 145 aa24.33■■□□□ 1.49
TRIO-207ENST00000505971 NUP88Q99567 741 aaPredicted RBP24.33■■□□□ 1.49
TRIO-207ENST00000505971 A0A0C4DFX4 3053 aa24.32■■□□□ 1.48
TRIO-207ENST00000505971 LRRC41Q15345 812 aa24.32■■□□□ 1.48
TRIO-207ENST00000505971 LRRFIP1Q32MZ4 808 aaKnown RBP24.32■■□□□ 1.48
TRIO-207ENST00000505971 STK11IPQ8N1F8 1099 aa24.32■■□□□ 1.48
TRIO-207ENST00000505971 PRPF38AQ8NAV1 312 aaKnown RBP24.32■■□□□ 1.48
TRIO-207ENST00000505971 OTUD7AQ8TE49 926 aaPredicted RBP24.32■■□□□ 1.48
TRIO-207ENST00000505971 SEC62Q99442 399 aaKnown RBP24.32■■□□□ 1.48
TRIO-207ENST00000505971 TEX13BQ9BXU2 312 aa24.32■■□□□ 1.48
TRIO-207ENST00000505971 ZNF287Q9HBT7 754 aa24.32■■□□□ 1.48
TRIO-207ENST00000505971 MTMR4Q9NYA4 1195 aa24.32■■□□□ 1.48
TRIO-207ENST00000505971 CLIP2Q9UDT6 1046 aa24.32■■□□□ 1.48
TRIO-207ENST00000505971 LTBP2Q14767 1821 aa24.32■■□□□ 1.48
TRIO-207ENST00000505971 KBTBD13C9JR72 458 aa24.31■■□□□ 1.48
TRIO-207ENST00000505971 ERC2O15083 957 aa24.31■■□□□ 1.48
TRIO-207ENST00000505971 ZNF865P0CJ78 1059 aaPredicted RBP24.31■■□□□ 1.48
TRIO-207ENST00000505971 TDO2P48775 406 aa24.31■■□□□ 1.48
TRIO-207ENST00000505971 FAM47AQ5JRC9 791 aa24.31■■□□□ 1.48
TRIO-207ENST00000505971 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.31■■□□□ 1.48
TRIO-207ENST00000505971 ZNF444Q8N0Y2 327 aaPredicted RBP24.31■■□□□ 1.48
TRIO-207ENST00000505971 CEP95Q96GE4 821 aa24.31■■□□□ 1.48
TRIO-207ENST00000505971 RIPK3Q9Y572 518 aa24.31■■□□□ 1.48
TRIO-207ENST00000505971 SALL3Q9BXA9 1300 aa24.31■■□□□ 1.48
TRIO-207ENST00000505971 PLIN4Q96Q06 1357 aa24.3■■□□□ 1.48
TRIO-207ENST00000505971 DNAJC25-GNG10A0A024R161 153 aa24.3■■□□□ 1.48
TRIO-207ENST00000505971 RAD21O60216 631 aa24.3■■□□□ 1.48
TRIO-207ENST00000505971 PRDM1O75626 825 aa24.3■■□□□ 1.48
TRIO-207ENST00000505971 ZMYM1Q5SVZ6 1142 aa24.3■■□□□ 1.48
TRIO-207ENST00000505971 MSL3Q8N5Y2 521 aaKnown RBP24.3■■□□□ 1.48
TRIO-207ENST00000505971 NEDD1Q8NHV4 660 aa24.3■■□□□ 1.48
TRIO-207ENST00000505971 APPP05067 770 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms