RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ABT1Q9ULW3 272 aaKnown RBP23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 FRMPD2Q68DX3 1309 aaPredicted RBP23.77■■□□□ 1.4
CDC42SE2-206ENST00000503291 CXCL11O14625 94 aa23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 SLC4A3P48751 1232 aa23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 ZNF543Q08ER8 600 aa23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 KCTD1Q719H9 257 aa23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 LPAR1Q92633 364 aa23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 RBM28Q9NW13 759 aaKnown RBP23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 KCNH4Q9UQ05 1017 aa23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 DHX16O60231 1041 aaKnown RBP23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 CCDC96Q2M329 555 aa23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 SH3D19Q5HYK7 790 aa23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 WNK4Q96J92 1243 aa23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 GPCPD1Q9NPB8 672 aa23.76■■□□□ 1.39
CDC42SE2-206ENST00000503291 CPLX1O14810 134 aa23.75■■□□□ 1.39
CDC42SE2-206ENST00000503291 BMP3P12645 472 aa23.75■■□□□ 1.39
CDC42SE2-206ENST00000503291 ASPRV1Q53RT3 343 aa23.75■■□□□ 1.39
CDC42SE2-206ENST00000503291 CMTR1Q8N1G2 835 aaKnown RBP23.75■■□□□ 1.39
CDC42SE2-206ENST00000503291 KLRF2D3W0D1 207 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 DTNBO60941 627 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 ZNF157P51786 506 aaPredicted RBP23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 GPATCH4Q5T3I0 446 aaKnown RBP23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 RGMBQ6NW40 437 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 C12orf42Q96LP6 360 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 TMOD4Q9NZQ9 345 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 ISY1Q9ULR0 285 aaKnown RBP23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 PLEKHA8P1O95397 391 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 NTRK3Q16288 839 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 FAM83BQ5T0W9 1011 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 SPRYD7Q5W111 196 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 TTBK2Q6IQ55 1244 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 CCDC82Q8N4S0 544 aa23.74■■□□□ 1.39
CDC42SE2-206ENST00000503291 A0A0G2JLL6 359 aaPredicted RBP23.73■■□□□ 1.39
CDC42SE2-206ENST00000503291 CTDNEP1O95476 244 aa23.73■■□□□ 1.39
CDC42SE2-206ENST00000503291 VCAM1P19320 739 aa23.73■■□□□ 1.39
CDC42SE2-206ENST00000503291 GNAQP50148 359 aa23.73■■□□□ 1.39
CDC42SE2-206ENST00000503291 MKRN3Q13064 507 aaKnown RBP23.73■■□□□ 1.39
CDC42SE2-206ENST00000503291 PRRT2Q7Z6L0 340 aaPredicted RBP23.73■■□□□ 1.39
CDC42SE2-206ENST00000503291 SRBD1Q8N5C6 995 aaKnown RBP23.73■■□□□ 1.39
CDC42SE2-206ENST00000503291 WDR46O15213 610 aaKnown RBP23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 CPLX2Q6PUV4 134 aaKnown RBP23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 TMTC3Q6ZXV5 915 aa23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 NBPF11Q86T75 865 aa23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 UBA5Q9GZZ9 404 aa23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 PPFIA3O75145 1194 aa23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 HSP90AA1P07900 732 aaKnown RBP23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 ZBTB48P10074 688 aaPredicted RBP23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 APLP1P51693 650 aa23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 SNAPC2Q13487 334 aa23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 SPRYD3Q8NCJ5 442 aa23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 CPVLQ9H3G5 476 aa23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 FOXD4L1Q9NU39 408 aa23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 PTPRFP10586 1907 aa23.72■■□□□ 1.39
CDC42SE2-206ENST00000503291 TMEM232C9JQI7 657 aa23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 RASAL3Q86YV0 1011 aa23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 LZTS2Q9BRK4 669 aa23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 DAXXQ9UER7 740 aaPredicted RBP23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 IFNAR1P17181 557 aa23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 SLC16A2P36021 539 aa23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 FUT2Q10981 343 aa23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 NSUN7Q8NE18 718 aaKnown RBP23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 INTS4Q96HW7 963 aaKnown RBP23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 HHIPL1Q96JK4 782 aa23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 IPO9Q96P70 1041 aaKnown RBP23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 LLPHQ9BRT6 129 aaKnown RBP23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.71■■□□□ 1.39
CDC42SE2-206ENST00000503291 SLC35G1Q2M3R5 365 aa23.7■■□□□ 1.38
CDC42SE2-206ENST00000503291 GADL1Q6ZQY3 521 aa23.7■■□□□ 1.38
CDC42SE2-206ENST00000503291 PHKBQ93100 1093 aa23.7■■□□□ 1.38
CDC42SE2-206ENST00000503291 RPAP3Q9H6T3 665 aaPredicted RBP23.7■■□□□ 1.38
CDC42SE2-206ENST00000503291 CREBZFQ9NS37 354 aa23.7■■□□□ 1.38
CDC42SE2-206ENST00000503291 CYTH3O43739 400 aa23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 JAK2O60674 1132 aa23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 CDKL5O76039 1030 aa23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 GTF2A2P52657 109 aa23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 PROCA1Q8NCQ7 364 aaPredicted RBP23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 MS4A4AQ96JQ5 239 aa23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 SMARCA1P28370 1054 aa23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 STAT2P52630 851 aa23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 IKQ13123 557 aaPredicted RBP23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 FASTKD5Q7L8L6 764 aaKnown RBP23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 TANGO6Q9C0B7 1094 aa23.69■■□□□ 1.38
CDC42SE2-206ENST00000503291 BAZ2BQ9UIF8 2168 aaKnown RBP23.68■■□□□ 1.38
CDC42SE2-206ENST00000503291 MOGSQ13724 837 aa23.68■■□□□ 1.38
CDC42SE2-206ENST00000503291 TREML2Q5T2D2 321 aa23.68■■□□□ 1.38
CDC42SE2-206ENST00000503291 BTNL9Q6UXG8 535 aa23.68■■□□□ 1.38
CDC42SE2-206ENST00000503291 CCDC102AQ96A19 550 aa23.68■■□□□ 1.38
CDC42SE2-206ENST00000503291 VAT1LQ9HCJ6 419 aa23.68■■□□□ 1.38
CDC42SE2-206ENST00000503291 FEM1BQ9UK73 627 aa23.68■■□□□ 1.38
CDC42SE2-206ENST00000503291 PTPDC1A2A3K4 754 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 SMARCC2Q8TAQ2 1214 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 CHURC1Q8WUH1 139 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 DDX11Q96FC9 970 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 SPZ1Q9BXG8 430 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 RIOX1Q9H6W3 641 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 FBXO28Q9NVF7 368 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 PLA2G6O60733 806 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 SLC10A3P09131 477 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 CETPP11597 493 aa23.67■■□□□ 1.38
CDC42SE2-206ENST00000503291 SSRP1Q08945 709 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms