RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 TBC1D9BQ66K14 1250 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 ESR2Q92731 530 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 BPIFA3Q9BQP9 254 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 CDCA7Q9BWT1 371 aaPredicted RBP5.84□□□□□ -1.47
CLDND1-208ENST00000503004 AATFQ9NY61 560 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLDND1-208ENST00000503004 SRP68Q9UHB9 627 aaKnown RBP5.84□□□□□ -1.47
CLDND1-208ENST00000503004 ZNF652Q9Y2D9 606 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 SPATA31A5Q5VU36 1347 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 SPATA31A7Q8IWB4 1347 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 STK36Q9NRP7 1315 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 USP17L12C9JPN9 530 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 USP17L21D6R901 530 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 WNT7AO00755 349 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 C21orf2O43822 256 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 NEBLO76041 1014 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 SLU7O95391 586 aaKnown RBP5.84□□□□□ -1.47
CLDND1-208ENST00000503004 DEXIO95424 95 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 SERPINC1P01008 464 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 PRDX5P30044 214 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 TBC1D8BQ0IIM8 1120 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 GPS2Q13227 327 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 SEC23AQ15436 765 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 CFAP100Q494V2 611 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 CAVIN4Q5BKX8 364 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 TXNRD3Q86VQ6 643 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 AMIGO3Q86WK7 504 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 KAT2BQ92831 832 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 RNF41Q9H4P4 317 aaPredicted RBP5.84□□□□□ -1.47
CLDND1-208ENST00000503004 FANCLQ9NW38 375 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 STK24Q9Y6E0 443 aa5.84□□□□□ -1.47
CLDND1-208ENST00000503004 V9GY48 417 aaPredicted RBP5.84□□□□□ -1.47
CLDND1-208ENST00000503004 DOCK2Q92608 1830 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 TMEM232C9JQI7 657 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 CUTAO60888 179 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 SFPQP23246 707 aaKnown RBP eCLIP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 CASP1P29466 404 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 UBASH3AP57075 661 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 MYL5Q02045 173 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 RILPL1Q5EBL4 403 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 FAM47AQ5JRC9 791 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 IFIT1BQ5T764 474 aaKnown RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 E4F1Q66K89 784 aaPredicted RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 TRMT44Q8IYL2 757 aaKnown RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 CCAR2Q8N163 923 aaKnown RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 WASF1Q92558 559 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 THOC1Q96FV9 657 aaKnown RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 ZSCAN10Q96SZ4 725 aaPredicted RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 OSBPL5Q9H0X9 879 aaPredicted RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 PLEKHA4Q9H4M7 779 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 GNL3LQ9NVN8 582 aaKnown RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 ETAA1Q9NY74 926 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 SERTAD1Q9UHV2 236 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 FBXO2Q9UK22 296 aaPredicted RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 THRAP3Q9Y2W1 955 aaKnown RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 CHD4Q14839 1912 aa5.84□□□□□ -1.48
CLDND1-208ENST00000503004 BAZ2AQ9UIF9 1905 aaKnown RBP5.84□□□□□ -1.48
CLDND1-208ENST00000503004 RTL9Q8NET4 1388 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 ECM29Q5VYK3 1845 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 MYH2Q9UKX2 1941 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 EME2A4GXA9 379 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 NEMFO60524 1076 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 IPO7O95373 1038 aaKnown RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 TPM1P09493 284 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 VEGFAP15692 232 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 PTPREP23469 700 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 MECOMQ03112 1051 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 TROAPQ12815 778 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 UBE4AQ14139 1066 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 PKN1Q16512 942 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 JAKMIP3Q5VZ66 844 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 CLEC4GQ6UXB4 293 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 NYAP1Q6ZVC0 841 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 TMTC2Q8N394 836 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 ARAP2Q8WZ64 1704 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 EPSTI1Q96J88 318 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 CSRNP2Q9H175 543 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 FOXP1Q9H334 677 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 PSD3Q9NYI0 1048 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 CICQ96RK0 1608 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 ZC3H4Q9UPT8 1303 aaKnown RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 FAM237AA0A1B0GTK4 181 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 RBM47A0AV96 593 aaKnown RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 IKBKBO14920 756 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 SASH3O75995 380 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 CYP2D6P10635 497 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 GSDMDP57764 484 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 IRX1P78414 480 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 MDM2Q00987 491 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 AKAP17AQ02040 695 aaKnown RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 FMR1Q06787 632 aaKnown RBP eCLIP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 POSTNQ15063 836 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 SF3B3Q15393 1217 aaKnown RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 KCNV1Q6PIU1 500 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 TMCO3Q6UWJ1 677 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 SND1Q7KZF4 910 aaKnown RBP eCLIP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 GPIHBP1Q8IV16 184 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 NSUN4Q96CB9 384 aaKnown RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 SGIP1Q9BQI5 828 aa5.83□□□□□ -1.48
CLDND1-208ENST00000503004 NUCKS1Q9H1E3 243 aaKnown RBP5.83□□□□□ -1.48
CLDND1-208ENST00000503004 PLCH1Q4KWH8 1693 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms