RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 LIFRP42702 1097 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 BTDP43251 543 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 FGD1P98174 961 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 ST3GAL1Q11201 340 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 TRIM32Q13049 653 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 DACT2Q5SW24 774 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 SGMS1Q86VZ5 419 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 DEPDC4Q8N2C3 294 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 ANGEL1Q9UNK9 670 aaKnown RBP8.99□□□□□ -0.97
CDC42-205ENST00000498236 NEDD4P46934 1319 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 ROBO3Q96MS0 1386 aa8.99□□□□□ -0.97
CDC42-205ENST00000498236 ZNF646O15015 1829 aaPredicted RBP8.98□□□□□ -0.97
CDC42-205ENST00000498236 BRCA1P38398 1863 aaKnown RBP8.98□□□□□ -0.97
CDC42-205ENST00000498236 MYH2Q9UKX2 1941 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 USP17L12C9JPN9 530 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 USP17L21D6R901 530 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 SH2B2O14492 632 aaPredicted RBP8.98□□□□□ -0.97
CDC42-205ENST00000498236 BRD1O95696 1058 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 SLC3A2P08195 630 aaKnown RBP8.98□□□□□ -0.97
CDC42-205ENST00000498236 PDIA3P30101 505 aaKnown RBP8.98□□□□□ -0.97
CDC42-205ENST00000498236 RCAN1P53805 252 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 RHBDL3P58872 404 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 NFKBIBQ15653 356 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 AOC3Q16853 763 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 DALRD3Q5D0E6 543 aaKnown RBP8.98□□□□□ -0.97
CDC42-205ENST00000498236 PLA2G2CQ5R387 149 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 TREML4Q6UXN2 200 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 CYB5R4Q7L1T6 521 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 CCDC83Q8IWF9 413 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 TMTC2Q8N394 836 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 IGDCC4Q8TDY8 1250 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 SH3RF3Q8TEJ3 882 aaPredicted RBP8.98□□□□□ -0.97
CDC42-205ENST00000498236 ESR2Q92731 530 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 TNPO1Q92973 898 aaKnown RBP8.98□□□□□ -0.97
CDC42-205ENST00000498236 DBNDD1Q9H9R9 158 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 ZSWIM5Q9P217 1185 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 SMC3Q9UQE7 1217 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.98□□□□□ -0.973e-6■■■□□ 16.2
CDC42-205ENST00000498236 DAGLAQ9Y4D2 1042 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 TACC3Q9Y6A5 838 aa8.98□□□□□ -0.97
CDC42-205ENST00000498236 DDX60LQ5H9U9 1706 aaKnown RBP8.97□□□□□ -0.97
CDC42-205ENST00000498236 LAMB1P07942 1786 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 MINDY4BA8MYZ0 360 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 B4E1Z4 1266 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 PPIP5K2O43314 1243 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 DHX16O60231 1041 aaKnown RBP8.97□□□□□ -0.97
CDC42-205ENST00000498236 PDCP20941 246 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 RPIAP49247 311 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 WNT7BP56706 349 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 APOBRQ0VD83 1088 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 SCRN1Q12765 414 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 NCOA4Q13772 614 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 SART3Q15020 963 aaKnown RBP8.97□□□□□ -0.97
CDC42-205ENST00000498236 NBPF20Q3BBV1 942 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 C12orf60Q5U649 245 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 AMOTL1Q8IY63 956 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 TRMT44Q8IYL2 757 aaKnown RBP8.97□□□□□ -0.97
CDC42-205ENST00000498236 NECAB1Q8N987 351 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 RGS22Q8NE09 1264 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 SMARCC2Q8TAQ2 1214 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 TEKT1Q969V4 418 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 ZDHHC15Q96MV8 337 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 ANP32EQ9BTT0 268 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 LRRC2Q9BYS8 371 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 LY9Q9HBG7 655 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 AAASQ9NRG9 546 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 CDV3Q9UKY7 258 aaKnown RBP8.97□□□□□ -0.97
CDC42-205ENST00000498236 TTF2Q9UNY4 1162 aaKnown RBP8.97□□□□□ -0.97
CDC42-205ENST00000498236 ZDHHC9Q9Y397 364 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 MYO3BQ8WXR4 1341 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 WDR33Q9C0J8 1336 aaKnown RBP8.97□□□□□ -0.97
CDC42-205ENST00000498236 LTBP3Q9NS15 1303 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 NID2Q14112 1375 aa8.97□□□□□ -0.97
CDC42-205ENST00000498236 PSME4Q14997 1843 aa8.96□□□□□ -0.97
CDC42-205ENST00000498236 SCN9AQ15858 1988 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 YDJCA8MPS7 323 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 GJB2P29033 226 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 USP5P45974 858 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 HMGN5P82970 282 aaKnown RBP8.96□□□□□ -0.98
CDC42-205ENST00000498236 PDE4BQ07343 736 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 APOBEC3HQ6NTF7 200 aaKnown RBP8.96□□□□□ -0.98
CDC42-205ENST00000498236 ILDR2Q71H61 639 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 CHST3Q7LGC8 479 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 TEX11Q8IYF3 940 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 TGFBRAP1Q8WUH2 860 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 GBP4Q96PP9 640 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 KCNQ5Q9NR82 932 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 MCM9Q9NXL9 1143 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 BRPF3Q9ULD4 1205 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 FLT1P17948 1338 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 FOCADQ5VW36 1801 aa8.96□□□□□ -0.98
CDC42-205ENST00000498236 KLF18A0A0U1RQI7 1052 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 IFIT3O14879 490 aaKnown RBP8.95□□□□□ -0.98
CDC42-205ENST00000498236 STX6O43752 255 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 VIL1P09327 827 aaKnown RBP8.95□□□□□ -0.98
CDC42-205ENST00000498236 PTMSP20962 102 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 SYT1P21579 422 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 VARSP26640 1264 aaKnown RBP8.95□□□□□ -0.98
CDC42-205ENST00000498236 MCM4P33991 863 aa8.95□□□□□ -0.98
CDC42-205ENST00000498236 CRKP46108 304 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms