RNA–Protein interactions for RNA: ENST00000497236.1

CRIM1-208, Transcript of cysteine rich transmembrane BMP regulator 1, human

TSL 3

Gene CRIM1, Length 240 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRIM1-208	ENST00000497236	ALDH16A1	Q8IZ83	802 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	IQCK	Q8N0W5	287 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	LRRC43	Q8N309	656 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	RNF10	Q8N5U6	811 aa	Known RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	PDILT	Q8N807	584 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	TSPYL6	Q8N831	410 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	SMC1B	Q8NDV3	1235 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	PI4K2B	Q8TCG2	481 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	OTUD7A	Q8TE49	926 aa	Predicted RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	NOC3L	Q8WTT2	800 aa	Known RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	DYDC1	Q8WWB3	177 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	WASF1	Q92558	559 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	BRF1	Q92994	677 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	PPP2R3C	Q969Q6	453 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	JAKMIP2	Q96AA8	810 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	ACSBG1	Q96GR2	724 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	CALR3	Q96L12	384 aa	Known RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	ATP6V1G3	Q96LB4	118 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	NEUROD6	Q96NK8	337 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	GSDMA	Q96QA5	445 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	RAB3IP	Q96QF0	476 aa	Predicted RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	TSPAN18	Q96SJ8	248 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	MEIS3	Q99687	375 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	TUBB6	Q9BUF5	446 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	SELENOO	Q9BVL4	669 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	FAM129A	Q9BZQ8	928 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	TRIM7	Q9C029	511 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	NRDE2	Q9H7Z3	1164 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	DMAP1	Q9NPF5	467 aa	Predicted RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	IRAK4	Q9NWZ3	460 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	TUBA8	Q9NY65	449 aa	Predicted RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	PPP1R1B	Q9UD71	204 aa	Predicted RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	DDX20	Q9UHI6	824 aa	Known RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	DDX25	Q9UHL0	483 aa	Known RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	TMCO1	Q9UM00	188 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	PCDHA7	Q9UN72	937 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	ZNF148	Q9UQR1	794 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	C15orf41	Q9Y2V0	281 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	CHMP3	Q9Y3E7	222 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	RBM8A	Q9Y5S9	174 aa	Known RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	SLC4A7	Q9Y6M7	1214 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	TARBP1	Q13395	1621 aa	Known RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	ZCCHC11	Q5TAX3	1644 aa	Known RBP	3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	ABCC1	P33527	1531 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	RIMS2	Q9UQ26	1411 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	TET3	O43151	1660 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	GLI2	P10070	1586 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	FRMPD1	Q5SYB0	1578 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	UGGT1	Q9NYU2	1555 aa		3.17	□□□□□ -1.9
CRIM1-208	ENST00000497236	CHD2	O14647	1828 aa	Known RBP	3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	ADCY9	O60503	1353 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	PREX2	Q70Z35	1606 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	ABCC12	Q96J65	1359 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	JCAD	Q9P266	1359 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	ABCC3	O15438	1527 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	NEXMIF	Q5QGS0	1516 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	GRID2IP	A4D2P6	1211 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236		A6NHS1	94 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	NBPF26	B4DH59	902 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	GCOM1	H8Y6P7	765 aa	Predicted RBP	3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236		O00370	1275 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	BIN1	O00499	593 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	WNT7A	O00755	349 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	BIRC5	O15392	142 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	PPIP5K2	O43314	1243 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	TRAPPC3	O43617	180 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	PPP1R12B	O60237	982 aa	Predicted RBP	3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	N4BP1	O75113	896 aa	Known RBP	3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	MFAP3L	O75121	409 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	HIP1R	O75146	1068 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	PHACTR2	O75167	634 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	SMIM24	O75264	130 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	E2F6	O75461	281 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	SMNDC1	O75940	238 aa	Known RBP eCLIP	3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	MYL1	P05976	194 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	RHOXF2B	P0C7M4	288 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	MYZAP	P0CAP1	466 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	CCDC166	P0CW27	439 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	ALAD	P13716	330 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	ZFX	P17010	805 aa	Predicted RBP	3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	NR1D1	P20393	614 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	CALB2	P22676	271 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	PAX7	P23759	505 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	LMOD1	P29536	600 aa	Predicted RBP	3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	CCT6A	P40227	531 aa	Known RBP	3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	PSMC4	P43686	418 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	PLCD1	P51178	756 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	CCNH	P51946	323 aa	Predicted RBP	3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	PRSS12	P56730	875 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	LACTB	P83111	547 aa	Predicted RBP	3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	KIF5A	Q12840	1032 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	IFT88	Q13099	833 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	CUL4B	Q13620	913 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	LAMB3	Q13751	1172 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	PPP2R5B	Q15173	497 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	SPA17	Q15506	151 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	TSNAXIP1	Q2TAA8	658 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	PROX2	Q3B8N5	592 aa		3.16	□□□□□ -1.9
CRIM1-208	ENST00000497236	DPCR1	Q3MIW9	517 aa		3.16	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms