RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-211	ENST00000493957	MYH6	P13533	1939 aa		13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	ZNF213	O14771	459 aa		13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	RAD21	O60216	631 aa		13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	HERVK_113	P62684	666 aa		13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	LACTB	P83111	547 aa	Predicted RBP	13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	CATSPERG	Q6ZRH7	1159 aa		13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	OTOP1	Q7RTM1	612 aa		13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	ERO1A	Q96HE7	468 aa		13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	LSG1	Q9H089	658 aa	Known RBP	13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	NYAP2	Q9P242	653 aa		13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	TRIM17	Q9Y577	477 aa		13.8	□□□□□ -0.2
UBA3-211	ENST00000493957	USP17L15	C9J2P7	530 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	USP17L13	C9JLJ4	530 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	USP17L11	C9JVI0	530 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	USP17L18	D6R9N7	530 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	USP17L22	D6RA61	530 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	USP17L17	D6RBQ6	530 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	USP17L19	D6RCP7	530 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	USP17L20	D6RJB6	530 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	CDC45	O75419	566 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	CNMD	O75829	334 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	CYP21A2	P08686	494 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	USP17L24	Q0WX57	530 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	IMMT	Q16891	758 aa	Known RBP	13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	MFSD6	Q6ZSS7	791 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	TRIM47	Q96LD4	638 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	TANGO6	Q9C0B7	1094 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	FBXO28	Q9NVF7	368 aa		13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	RBM8A	Q9Y5S9	174 aa	Known RBP	13.79	□□□□□ -0.2
UBA3-211	ENST00000493957	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.78	□□□□□ -0.2
UBA3-211	ENST00000493957		B4E1Z4	1266 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	TTLL1	O95922	423 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	NDUFB10	O96000	172 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	FAM83B	Q5T0W9	1011 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	STOX1	Q6ZVD7	989 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	MAP4K1	Q92918	833 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	FAM212A	Q96EL1	285 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	ZKSCAN3	Q9BRR0	538 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	PAGR1	Q9BTK6	254 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	SH2D4A	Q9H788	454 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	GOPC	Q9HD26	462 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	RBPJL	Q9UBG7	517 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	CTNNA3	Q9UI47	895 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957	PLXNA1	Q9UIW2	1896 aa		13.78	□□□□□ -0.2
UBA3-211	ENST00000493957		F5H6K3	240 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	KDM4A	O75164	1064 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	PSMC4	P43686	418 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	GCLC	P48506	637 aa	Predicted RBP	13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	KLRC3	Q07444	240 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	COL9A3	Q14050	684 aa	Predicted RBP	13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	FAM110C	Q1W6H9	321 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957		Q3C1V9	767 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	LPAR1	Q92633	364 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	MKL1	Q969V6	931 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	EFCC1	Q9HA90	598 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	ANO2	Q9NQ90	1003 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	BTBD7	Q9P203	1132 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	STX8	Q9UNK0	236 aa		13.77	□□□□□ -0.21
UBA3-211	ENST00000493957	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.76	□□□□□ -0.21
UBA3-211	ENST00000493957	WDR46	O15213	610 aa	Known RBP	13.76	□□□□□ -0.21
UBA3-211	ENST00000493957	NOV	P48745	357 aa		13.76	□□□□□ -0.21
UBA3-211	ENST00000493957	RCSD1	Q6JBY9	416 aa		13.76	□□□□□ -0.21
UBA3-211	ENST00000493957	CYB5R4	Q7L1T6	521 aa		13.76	□□□□□ -0.21
UBA3-211	ENST00000493957	ATG4C	Q96DT6	458 aa		13.76	□□□□□ -0.21
UBA3-211	ENST00000493957	RNF41	Q9H4P4	317 aa	Predicted RBP	13.76	□□□□□ -0.21
UBA3-211	ENST00000493957	MORF4L1	Q9UBU8	362 aa		13.76	□□□□□ -0.21
UBA3-211	ENST00000493957	MTMR7	Q9Y216	660 aa		13.76	□□□□□ -0.21
UBA3-211	ENST00000493957	CENPF	P49454	3210 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	FLOT1	O75955	427 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	FMNL1	O95466	1100 aa	Predicted RBP	13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	PC	P11498	1178 aa	Known RBP	13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	ERVK-9	P63128	1117 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	ERVK-24	P63145	666 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	SLFN13	Q68D06	897 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	KIAA1211	Q6ZU35	1233 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	ESR2	Q92731	530 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	ABHD8	Q96I13	439 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	TMEM47	Q9BQJ4	181 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	PORCN	Q9H237	461 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	ZSWIM5	Q9P217	1185 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	GABRQ	Q9UN88	632 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	PTPN22	Q9Y2R2	807 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	PTCH2	Q9Y6C5	1203 aa		13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	KIAA0100	Q14667	2235 aa	Known RBP	13.75	□□□□□ -0.21
UBA3-211	ENST00000493957	MCM3AP	O60318	1980 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957		E7EWF7	191 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	SLC27A2	O14975	620 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	MCC	P23508	829 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	COG2	Q14746	738 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	KIF22	Q14807	665 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	LBX2	Q6XYB7	198 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	GMCL1P1	Q8NEA9	526 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	KRTAP3-3	Q9BYR6	98 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	KRTAP3-2	Q9BYR7	98 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	TCP11L1	Q9NUJ3	509 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	HPS5	Q9UPZ3	1129 aa		13.74	□□□□□ -0.21
UBA3-211	ENST00000493957	LCT	P09848	1927 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	TNPO2	O14787	897 aa	Known RBP	13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	EMP3	P54852	163 aa		13.73	□□□□□ -0.21

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