RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 XBP1P17861 261 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 IGHMBP2P38935 993 aaKnown RBP11.03□□□□□ -0.64
TSC1-207ENST00000493467 CLCN6P51797 869 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 MARSP56192 900 aaKnown RBP11.03□□□□□ -0.64
TSC1-207ENST00000493467 NR1I3Q14994 352 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 SPECC1Q5M775 1068 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 NPAS4Q8IUM7 802 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 ESR2Q92731 530 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 UBAC1Q9BSL1 405 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 ZHX1Q9UKY1 873 aaPredicted RBP11.03□□□□□ -0.64
TSC1-207ENST00000493467 TNKSO95271 1327 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 ANKRD33BA6NCL7 494 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 TRIM75PA6NK02 468 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
TSC1-207ENST00000493467 NTSR2O95665 410 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 FUT2Q10981 343 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 ARHGAP29Q52LW3 1261 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 SHISA4Q96DD7 197 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 MED15Q96RN5 788 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 ZKSCAN3Q9BRR0 538 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 CSRNP2Q9H175 543 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 SEC31BQ9NQW1 1179 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 TOMM22Q9NS69 142 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 CCDC87Q9NVE4 849 aa11.03□□□□□ -0.64
TSC1-207ENST00000493467 RBM28Q9NW13 759 aaKnown RBP11.03□□□□□ -0.64
TSC1-207ENST00000493467 ARGLU1Q9NWB6 273 aaPredicted RBP11.03□□□□□ -0.64
TSC1-207ENST00000493467 COL4A1P02462 1669 aa11.02□□□□□ -0.64
TSC1-207ENST00000493467 ZNF831Q5JPB2 1677 aa11.02□□□□□ -0.64
TSC1-207ENST00000493467 COL1A1P02452 1464 aaPredicted RBP11.02□□□□□ -0.65
TSC1-207ENST00000493467 COL5A3P25940 1745 aaPredicted RBP11.02□□□□□ -0.65
TSC1-207ENST00000493467 SOWAHDA6NJG2 315 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
TSC1-207ENST00000493467 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
TSC1-207ENST00000493467 ATP8B1O43520 1251 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 CAMTA2O94983 1202 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 ZRANB2O95218 330 aaKnown RBP eCLIP11.02□□□□□ -0.653e-9■■■□□ 16.4
TSC1-207ENST00000493467 FGRP09769 529 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 KRT2P35908 639 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 BCAMP50895 628 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 HSPA2P54652 639 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 GOLGA8FQ08AF8 430 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 GOLGA8DPQ0D2H9 430 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 TERF2Q15554 542 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 PKN1Q16512 942 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 INTS5Q6P9B9 1019 aaKnown RBP11.02□□□□□ -0.65
TSC1-207ENST00000493467 PADI6Q6TGC4 694 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 ZNF662Q6ZS27 426 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 APTXQ7Z2E3 356 aaKnown RBP11.02□□□□□ -0.65
TSC1-207ENST00000493467 MNS1Q8NEH6 495 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 PANX2Q96RD6 677 aa11.02□□□□□ -0.65
TSC1-207ENST00000493467 CDC5LQ99459 802 aaKnown RBP11.02□□□□□ -0.65
TSC1-207ENST00000493467 SNAP23O00161 211 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 CALM1P0DP23 149 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 CALM2P0DP24 149 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 CALM3P0DP25 149 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 CYP7A1P22680 504 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 CHRNDQ07001 517 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 CUL4BQ13620 913 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 CERS3Q8IU89 383 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 KIFC2Q96AC6 838 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 SYTL4Q96C24 671 aaPredicted RBP11.01□□□□□ -0.65
TSC1-207ENST00000493467 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
TSC1-207ENST00000493467 RIOK1Q9BRS2 568 aaKnown RBP11.01□□□□□ -0.65
TSC1-207ENST00000493467 BRIP1Q9BX63 1249 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 NAA15Q9BXJ9 866 aaKnown RBP11.01□□□□□ -0.65
TSC1-207ENST00000493467 CABP5Q9NP86 173 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 LRP2BPQ9P2M1 347 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 FHOD1Q9Y613 1164 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 NRAPQ86VF7 1730 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 KIAA1551Q9HCM1 1747 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 SYNRGQ9UMZ2 1314 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 MAGEB6P1A0A0J9YX57 407 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 ANKRD62A6NC57 917 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 DDAH1O94760 285 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 URI1O94763 535 aaPredicted RBP11.01□□□□□ -0.65
TSC1-207ENST00000493467 RECKO95980 971 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 PBX1P40424 430 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 AKAP17AQ02040 695 aaKnown RBP11.01□□□□□ -0.65
TSC1-207ENST00000493467 ZNF827Q17R98 1081 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 CDKAL1Q5VV42 579 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 SPATA1Q5VX52 437 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 TRMT44Q8IYL2 757 aaKnown RBP11.01□□□□□ -0.65
TSC1-207ENST00000493467 GRAMD1CQ8IYS0 662 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 ANKRD13AQ8IZ07 590 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 MIGA1Q8NAN2 632 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 NUP133Q8WUM0 1156 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 TNFRSF25Q93038 417 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 MRFAP1Q9Y605 127 aa11.01□□□□□ -0.65
TSC1-207ENST00000493467 EXOC5O00471 708 aa11□□□□□ -0.65
TSC1-207ENST00000493467 CASQ1P31415 396 aa11□□□□□ -0.65
TSC1-207ENST00000493467 TMED8Q6PL24 325 aaPredicted RBP11□□□□□ -0.65
TSC1-207ENST00000493467 ADGRA1Q86SQ6 560 aa11□□□□□ -0.65
TSC1-207ENST00000493467 ENAHQ8N8S7 591 aaPredicted RBP11□□□□□ -0.65
TSC1-207ENST00000493467 EPS8L1Q8TE68 723 aa11□□□□□ -0.65
TSC1-207ENST00000493467 GSDMAQ96QA5 445 aa11□□□□□ -0.65
TSC1-207ENST00000493467 CTAGE1Q96RT6 745 aa11□□□□□ -0.65
TSC1-207ENST00000493467 ZSCAN10Q96SZ4 725 aaPredicted RBP11□□□□□ -0.65
TSC1-207ENST00000493467 CARD6Q9BX69 1037 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms