RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-210ENST00000490546 HMGCS2P54868 508 aa12.03□□□□□ -0.48
PUM1-210ENST00000490546 SSRP1Q08945 709 aaKnown RBP12.03□□□□□ -0.48
PUM1-210ENST00000490546 SCRN1Q12765 414 aa12.03□□□□□ -0.48
PUM1-210ENST00000490546 SNAPC2Q13487 334 aa12.03□□□□□ -0.48
PUM1-210ENST00000490546 TRIM22Q8IYM9 498 aa12.03□□□□□ -0.48
PUM1-210ENST00000490546 SPICE1Q8N0Z3 855 aa12.03□□□□□ -0.48
PUM1-210ENST00000490546 CHURC1Q8WUH1 139 aa12.03□□□□□ -0.48
PUM1-210ENST00000490546 IPO9Q96P70 1041 aaKnown RBP12.03□□□□□ -0.48
PUM1-210ENST00000490546 LLPHQ9BRT6 129 aaKnown RBP12.03□□□□□ -0.48
PUM1-210ENST00000490546 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
PUM1-210ENST00000490546 SMC3Q9UQE7 1217 aa12.03□□□□□ -0.48
PUM1-210ENST00000490546 KIF3AQ9Y496 699 aa12.03□□□□□ -0.48
PUM1-210ENST00000490546 PALM3A6NDB9 673 aaPredicted RBP12.02□□□□□ -0.49
PUM1-210ENST00000490546 IRF6O14896 467 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 WDR46O15213 610 aaKnown RBP12.02□□□□□ -0.49
PUM1-210ENST00000490546 GOLGA8HP0CJ92 632 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 GTF2A2P52657 109 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 ZNF543Q08ER8 600 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 CUL4AQ13619 759 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 RGMBQ6NW40 437 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 GADL1Q6ZQY3 521 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.49
PUM1-210ENST00000490546 KCTD1Q719H9 257 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 FASTKD5Q7L8L6 764 aaKnown RBP12.02□□□□□ -0.49
PUM1-210ENST00000490546 SAPCD2Q86UD0 394 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 CCDC82Q8N4S0 544 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 SPRYD3Q8NCJ5 442 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 INTS4Q96HW7 963 aaKnown RBP12.02□□□□□ -0.49
PUM1-210ENST00000490546 WNK4Q96J92 1243 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 MAD2L2Q9UI95 211 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 FEM1BQ9UK73 627 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 CTDP1Q9Y5B0 961 aaPredicted RBP12.02□□□□□ -0.49
PUM1-210ENST00000490546 TLL2Q9Y6L7 1015 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 FRMPD2Q68DX3 1309 aaPredicted RBP12.02□□□□□ -0.49
PUM1-210ENST00000490546 PHIPQ8WWQ0 1821 aa12.02□□□□□ -0.49
PUM1-210ENST00000490546 TMEM232C9JQI7 657 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 SNHG28P0DPA3 235 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 ZBTB48P10074 688 aaPredicted RBP12.01□□□□□ -0.49
PUM1-210ENST00000490546 CETPP11597 493 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 IFNAR1P17181 557 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 SMARCA1P28370 1054 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 CDC27P30260 824 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 APLP1P51693 650 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 HMGN5P82970 282 aaKnown RBP12.01□□□□□ -0.49
PUM1-210ENST00000490546 PABPC4Q13310 644 aaKnown RBP eCLIP12.01□□□□□ -0.49
PUM1-210ENST00000490546 SH3D19Q5HYK7 790 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 FAM83BQ5T0W9 1011 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 TMTC3Q6ZXV5 915 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 FAM160B2Q86V87 743 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 FAM184AQ8NB25 1140 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 NUP88Q99567 741 aaPredicted RBP12.01□□□□□ -0.49
PUM1-210ENST00000490546 TANGO6Q9C0B7 1094 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 VAT1LQ9HCJ6 419 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
PUM1-210ENST00000490546 KCNH4Q9UQ05 1017 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 MYH6P13533 1939 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 NID2Q14112 1375 aa12.01□□□□□ -0.49
PUM1-210ENST00000490546 A0A0G2JLL6 359 aaPredicted RBP12□□□□□ -0.49
PUM1-210ENST00000490546 USP17L15C9J2P7 530 aa12□□□□□ -0.49
PUM1-210ENST00000490546 USP17L13C9JLJ4 530 aa12□□□□□ -0.49
PUM1-210ENST00000490546 USP17L11C9JVI0 530 aa12□□□□□ -0.49
PUM1-210ENST00000490546 USP17L18D6R9N7 530 aa12□□□□□ -0.49
PUM1-210ENST00000490546 USP17L22D6RA61 530 aa12□□□□□ -0.49
PUM1-210ENST00000490546 USP17L17D6RBQ6 530 aa12□□□□□ -0.49
PUM1-210ENST00000490546 USP17L19D6RCP7 530 aa12□□□□□ -0.49
PUM1-210ENST00000490546 USP17L20D6RJB6 530 aa12□□□□□ -0.49
PUM1-210ENST00000490546 SLC4A3P48751 1232 aa12□□□□□ -0.49
PUM1-210ENST00000490546 STAT2P52630 851 aa12□□□□□ -0.49
PUM1-210ENST00000490546 USP17L24Q0WX57 530 aa12□□□□□ -0.49
PUM1-210ENST00000490546 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
PUM1-210ENST00000490546 SPRYD7Q5W111 196 aa12□□□□□ -0.49
PUM1-210ENST00000490546 SAMD1Q6SPF0 538 aaPredicted RBP12□□□□□ -0.49
PUM1-210ENST00000490546 PRRT2Q7Z6L0 340 aaPredicted RBP12□□□□□ -0.49
PUM1-210ENST00000490546 STAG2Q8N3U4 1231 aa12□□□□□ -0.49
PUM1-210ENST00000490546 PROCA1Q8NCQ7 364 aaPredicted RBP12□□□□□ -0.49
PUM1-210ENST00000490546 WASF1Q92558 559 aa12□□□□□ -0.49
PUM1-210ENST00000490546 RRP36Q96EU6 259 aaKnown RBP12□□□□□ -0.49
PUM1-210ENST00000490546 HHIPL1Q96JK4 782 aa12□□□□□ -0.49
PUM1-210ENST00000490546 C12orf42Q96LP6 360 aa12□□□□□ -0.49
PUM1-210ENST00000490546 SLC26A6Q9BXS9 759 aa12□□□□□ -0.49
PUM1-210ENST00000490546 UBA5Q9GZZ9 404 aa12□□□□□ -0.49
PUM1-210ENST00000490546 RPAP3Q9H6T3 665 aaPredicted RBP12□□□□□ -0.49
PUM1-210ENST00000490546 CWC22Q9HCG8 908 aaKnown RBP12□□□□□ -0.49
PUM1-210ENST00000490546 FAM217BQ9NTX9 383 aaPredicted RBP12□□□□□ -0.49
PUM1-210ENST00000490546 ORC3Q9UBD5 711 aaPredicted RBP12□□□□□ -0.49
PUM1-210ENST00000490546 SEC63Q9UGP8 760 aaKnown RBP12□□□□□ -0.49
PUM1-210ENST00000490546 PTPDC1A2A3K4 754 aa11.99□□□□□ -0.49
PUM1-210ENST00000490546 PLA2G6O60733 806 aa11.99□□□□□ -0.49
PUM1-210ENST00000490546 PLEKHA8P1O95397 391 aa11.99□□□□□ -0.49
PUM1-210ENST00000490546 VCAM1P19320 739 aa11.99□□□□□ -0.49
PUM1-210ENST00000490546 SYDE2Q5VT97 1194 aa11.99□□□□□ -0.49
PUM1-210ENST00000490546 TTBK2Q6IQ55 1244 aa11.99□□□□□ -0.49
PUM1-210ENST00000490546 CMTR1Q8N1G2 835 aaKnown RBP11.99□□□□□ -0.49
PUM1-210ENST00000490546 SRBD1Q8N5C6 995 aaKnown RBP11.99□□□□□ -0.49
PUM1-210ENST00000490546 PRPF38AQ8NAV1 312 aaKnown RBP11.99□□□□□ -0.49
PUM1-210ENST00000490546 PHKBQ93100 1093 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms