RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 VAMP4O75379 141 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 SOX11P35716 441 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 NAA30Q147X3 362 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 SLC4A8Q2Y0W8 1093 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 TWISTNBQ3B726 338 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 ARRDC4Q8NCT1 418 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 TPCN2Q8NHX9 752 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 GIPC2Q8TF65 315 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 ZNF516Q92618 1163 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 LPAR1Q92633 364 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 MRRFQ96E11 262 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 SPSB2Q99619 263 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 PRRX2Q99811 253 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 IRF2BPLQ9H1B7 796 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 IL21Q9HBE4 155 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 PICK1Q9NRD5 415 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 MTMR10Q9NXD2 777 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 GJD2Q9UKL4 321 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 H3BRB1 525 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 EYA2O00167 538 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 ADCY3O60266 1144 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 PLA2G6O60733 806 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 CABYRO75952 493 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 CCNYL3P0C7X3 344 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 JUNDP17535 347 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 PTPRAP18433 802 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 EIF2S2P20042 333 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 RFX5P48382 616 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 RAB30Q15771 203 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 TKFCQ3LXA3 575 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 C4orf48Q5BLP8 95 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 MFSD14BQ5SR56 506 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 NBPF12Q5TAG4 269 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 DNAJC14Q6Y2X3 702 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 ANKMY2Q8IV38 441 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 FAM43AQ8N2R8 423 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 TSEN2Q8NCE0 465 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 FOXJ1Q92949 421 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 PRMT6Q96LA8 375 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 MTRQ99707 1265 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 SRCIN1Q9C0H9 1055 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 TUT1Q9H6E5 874 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 SH2D4AQ9H788 454 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 PRKRIP1Q9H875 184 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 TANC1Q9C0D5 1861 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 PI4KAP2A4QPH2 592 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 FAM196BA6NMK8 535 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 ATP2A1O14983 1001 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 FMNL1O95466 1100 aaPredicted RBP3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 SLC25A27O95847 323 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 INHAP05111 366 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 ASNSP08243 561 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 EN2P19622 333 aaPredicted RBP3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 PSMC4P43686 418 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 OAZ1P54368 228 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 RBL2Q08999 1139 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 GRB14Q14449 540 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 AAK1Q2M2I8 961 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 Q3C1V9 767 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 MFSD14CQ5VZR4 134 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 DESI1Q6ICB0 168 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 ZBTB33Q86T24 672 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 TRMT2AQ8IZ69 625 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 SAMD3Q8N6K7 520 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 ANKRD44Q8N8A2 993 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 PI4KAP1Q8N8J0 262 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 CCER1Q8TC90 406 aaPredicted RBP3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 ARHGAP9Q9BRR9 750 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 C1QTNF1Q9BXJ1 281 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 API5Q9BZZ5 524 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 KIAA1683Q9H0B3 1180 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 UNC93B1Q9H1C4 597 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 MROH8Q9H579 483 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 TTF2Q9UNY4 1162 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 PLIN4Q96Q06 1357 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 ASTN2O75129 1339 aaPredicted RBP3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 A0A1B0GUL7 405 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 GFRA3O60609 400 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 PLA2G5P39877 138 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 SCTRP47872 440 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 PDE3AQ14432 1141 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 PTPRNQ16849 979 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 ANKRD33Q7Z3H0 272 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 PHTF2Q8N3S3 785 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 ZNF280CQ8ND82 737 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 RSPH1Q8WYR4 309 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 HINFPQ9BQA5 517 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 THUMPD2Q9BTF0 503 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 PRKD2Q9BZL6 878 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 MTIF3Q9H2K0 278 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 ELP3Q9H9T3 547 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 SWAP70Q9UH65 585 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 COG5Q9UP83 839 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 DAGLAQ9Y4D2 1042 aa3.36□□□□□ -1.87
DEPDC1-203ENST00000488146 RALGAPA2Q2PPJ7 1873 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 ANKRD33BA6NCL7 494 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 SOWAHDA6NJG2 315 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 DCDC2CA8MYV0 355 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 KPNA6O60684 536 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 EFCAB14O75071 495 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms