RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 GMCL1P1Q8NEA9 526 aa14.45□□□□□ -0.1
PTPRF-213ENST00000481019 SH3TC2Q8TF17 1288 aa14.45□□□□□ -0.1
PTPRF-213ENST00000481019 GJD2Q9UKL4 321 aa14.45□□□□□ -0.1
PTPRF-213ENST00000481019 STX8Q9UNK0 236 aa14.45□□□□□ -0.1
PTPRF-213ENST00000481019 RABGAP1Q9Y3P9 1069 aa14.45□□□□□ -0.1
PTPRF-213ENST00000481019 RBM8AQ9Y5S9 174 aaKnown RBP14.45□□□□□ -0.1
PTPRF-213ENST00000481019 TNPO2O14787 897 aaKnown RBP14.44□□□□□ -0.1
PTPRF-213ENST00000481019 FLT3LGP49771 235 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 SLFN13Q68D06 897 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 CYB5R4Q7L1T6 521 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 REPS2Q8NFH8 660 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 TMEM47Q9BQJ4 181 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 TCP11L1Q9NUJ3 509 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 ZSWIM5Q9P217 1185 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 CTNNA3Q9UI47 895 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 PPP1R9AQ9ULJ8 1098 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 ADAMTS5Q9UNA0 930 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 MTMR7Q9Y216 660 aa14.44□□□□□ -0.1
PTPRF-213ENST00000481019 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-213ENST00000481019 MCCP23508 829 aa14.43□□□□□ -0.1
PTPRF-213ENST00000481019 TMEM132BQ14DG7 1078 aa14.43□□□□□ -0.1
PTPRF-213ENST00000481019 MOV10L1Q9BXT6 1211 aaKnown RBP14.43□□□□□ -0.1
PTPRF-213ENST00000481019 RNF41Q9H4P4 317 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-213ENST00000481019 HOXC10Q9NYD6 342 aa14.43□□□□□ -0.1
PTPRF-213ENST00000481019 VWA5AO00534 786 aa14.42□□□□□ -0.1
PTPRF-213ENST00000481019 CDC45O75419 566 aa14.42□□□□□ -0.1
PTPRF-213ENST00000481019 GNRH1P01148 92 aa14.42□□□□□ -0.1
PTPRF-213ENST00000481019 PCP11498 1178 aaKnown RBP14.42□□□□□ -0.1
PTPRF-213ENST00000481019 ELNP15502 786 aa14.42□□□□□ -0.1
PTPRF-213ENST00000481019 SOX10P56693 466 aa14.42□□□□□ -0.1
PTPRF-213ENST00000481019 ARHGEF6Q15052 776 aa14.42□□□□□ -0.1
PTPRF-213ENST00000481019 KCTD1Q719H9 257 aa14.42□□□□□ -0.1
PTPRF-213ENST00000481019 GPR142Q7Z601 462 aa14.42□□□□□ -0.1
PTPRF-213ENST00000481019 GTF3C2Q8WUA4 911 aaPredicted RBP14.42□□□□□ -0.1
PTPRF-213ENST00000481019 ESR2Q92731 530 aa14.42□□□□□ -0.1
PTPRF-213ENST00000481019 SYNPO2Q9UMS6 1093 aa14.42□□□□□ -0.1
PTPRF-213ENST00000481019 E7EWF7 191 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 MYCP01106 439 aaPredicted RBP14.41□□□□□ -0.1
PTPRF-213ENST00000481019 BMP3P12645 472 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 SNAP25P60880 206 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 TTBK2Q6IQ55 1244 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 ENAHQ8N8S7 591 aaPredicted RBP14.41□□□□□ -0.1
PTPRF-213ENST00000481019 USP6NLQ92738 828 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 ARMC5Q96C12 935 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 GMCL1Q96IK5 515 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 SLF1Q9BQI6 1058 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 SPATC1LQ9H0A9 340 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 SENP2Q9HC62 589 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 ANO2Q9NQ90 1003 aa14.41□□□□□ -0.1
PTPRF-213ENST00000481019 TMEM232C9JQI7 657 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 SLC27A2O14975 620 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 TOP1P11387 765 aaKnown RBP14.4□□□□□ -0.1
PTPRF-213ENST00000481019 TAL1P17542 331 aaPredicted RBP14.4□□□□□ -0.1
PTPRF-213ENST00000481019 HOXD10P28358 340 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 PRMT2P55345 433 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 ANTXR2P58335 489 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 TRIM32Q13049 653 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 PLS1Q14651 629 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 NECTIN1Q15223 517 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 MTFR1Q15390 333 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 MORN1Q5T089 497 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 CASC1Q6TDU7 716 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 CHST3Q7LGC8 479 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 PLEKHH3Q7Z736 793 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 RAET1EQ8TD07 263 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 KIFC2Q96AC6 838 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 COA7Q96BR5 231 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 ZNF333Q96JL9 665 aa14.4□□□□□ -0.1
PTPRF-213ENST00000481019 ZSCAN10Q96SZ4 725 aaPredicted RBP14.4□□□□□ -0.1
PTPRF-213ENST00000481019 ZNF214Q9UL59 606 aaPredicted RBP14.4□□□□□ -0.1
PTPRF-213ENST00000481019 FRMPD2Q68DX3 1309 aaPredicted RBP14.4□□□□□ -0.1
PTPRF-213ENST00000481019 ADCY3O60266 1144 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 ERCC3P19447 782 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 MAPK4P31152 587 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 GRK4P32298 578 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 SLC16A2P36021 539 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 SLC1A4P43007 532 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 SEC23AQ15436 765 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 CCL14Q16627 93 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 SLC9C1Q4G0N8 1177 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 CREB3L3Q68CJ9 461 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 KIAA1211Q6ZU35 1233 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 ANKS1AQ92625 1134 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 KRT23Q9C075 422 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 GPHNQ9NQX3 736 aaPredicted RBP14.39□□□□□ -0.11
PTPRF-213ENST00000481019 FEM1BQ9UK73 627 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 RIPK3Q9Y572 518 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 TNKSO95271 1327 aa14.39□□□□□ -0.11
PTPRF-213ENST00000481019 TNRC18O15417 2968 aaPredicted RBP14.38□□□□□ -0.11
PTPRF-213ENST00000481019 POTEFA5A3E0 1075 aa14.38□□□□□ -0.11
PTPRF-213ENST00000481019 PDHBP11177 359 aa14.38□□□□□ -0.11
PTPRF-213ENST00000481019 CYP2B6P20813 491 aa14.38□□□□□ -0.11
PTPRF-213ENST00000481019 PTPREP23469 700 aa14.38□□□□□ -0.11
PTPRF-213ENST00000481019 IRF5Q13568 498 aa14.38□□□□□ -0.11
PTPRF-213ENST00000481019 WDR78Q5VTH9 848 aa14.38□□□□□ -0.11
PTPRF-213ENST00000481019 MB21D2Q8IYB1 491 aaPredicted RBP14.38□□□□□ -0.11
PTPRF-213ENST00000481019 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
PTPRF-213ENST00000481019 MB21D1Q8N884 522 aa14.38□□□□□ -0.11
PTPRF-213ENST00000481019 PRPF38AQ8NAV1 312 aaKnown RBP14.38□□□□□ -0.11
PTPRF-213ENST00000481019 TTC14Q96N46 770 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms