RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ATP2B2Q01814 1243 aa19.3■□□□□ 0.68
COL1A1-205ENST00000476387 LHX8Q68G74 356 aa19.3■□□□□ 0.68
COL1A1-205ENST00000476387 PLEKHM2Q8IWE5 1019 aa19.3■□□□□ 0.68
COL1A1-205ENST00000476387 RILPL2Q969X0 211 aa19.3■□□□□ 0.68
COL1A1-205ENST00000476387 NAPBQ9H115 298 aa19.3■□□□□ 0.68
COL1A1-205ENST00000476387 GOPCQ9HD26 462 aa19.3■□□□□ 0.68
COL1A1-205ENST00000476387 FLRT1Q9NZU1 646 aa19.3■□□□□ 0.68
COL1A1-205ENST00000476387 RBM27Q9P2N5 1060 aaKnown RBP19.3■□□□□ 0.68
COL1A1-205ENST00000476387 IGHA2P01877 340 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 ERCC3P19447 782 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 TICAM2Q86XR7 235 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 IFNL3Q8IZI9 196 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 ABRAQ8N0Z2 381 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 OSBPL3Q9H4L5 887 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 MROH8Q9H579 483 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 MKNK2Q9HBH9 465 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 ZNF287Q9HBT7 754 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 ADAMTS5Q9UNA0 930 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 ALPK3Q96L96 1907 aa19.29■□□□□ 0.68
COL1A1-205ENST00000476387 MSCO60682 206 aa19.28■□□□□ 0.68
COL1A1-205ENST00000476387 RASA1P20936 1047 aa19.28■□□□□ 0.68
COL1A1-205ENST00000476387 ADORA2AP29274 412 aa19.28■□□□□ 0.68
COL1A1-205ENST00000476387 OLFML2BQ68BL8 750 aa19.28■□□□□ 0.68
COL1A1-205ENST00000476387 DPP9Q86TI2 863 aa19.28■□□□□ 0.68
COL1A1-205ENST00000476387 STK11IPQ8N1F8 1099 aa19.28■□□□□ 0.68
COL1A1-205ENST00000476387 NPLOC4Q8TAT6 608 aa19.28■□□□□ 0.68
COL1A1-205ENST00000476387 ATG4CQ96DT6 458 aa19.28■□□□□ 0.68
COL1A1-205ENST00000476387 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.28■□□□□ 0.68
COL1A1-205ENST00000476387 HELLSQ9NRZ9 838 aa19.28■□□□□ 0.68
COL1A1-205ENST00000476387 A0A1W2PPC1 479 aa19.27■□□□□ 0.68
COL1A1-205ENST00000476387 SLC25A27O95847 323 aa19.27■□□□□ 0.68
COL1A1-205ENST00000476387 COL6A1P12109 1028 aa19.27■□□□□ 0.68
COL1A1-205ENST00000476387 CCDC129Q6ZRS4 1044 aa19.27■□□□□ 0.68
COL1A1-205ENST00000476387 SLC5A4Q9NY91 659 aa19.27■□□□□ 0.68
COL1A1-205ENST00000476387 PARP14Q460N5 1801 aa19.27■□□□□ 0.68
COL1A1-205ENST00000476387 PFASO15067 1338 aa19.26■□□□□ 0.67
COL1A1-205ENST00000476387 SLC3A2P08195 630 aaKnown RBP19.26■□□□□ 0.67
COL1A1-205ENST00000476387 PLS1Q14651 629 aa19.26■□□□□ 0.67
COL1A1-205ENST00000476387 NYAP2Q9P242 653 aa19.26■□□□□ 0.67
COL1A1-205ENST00000476387 DDX20Q9UHI6 824 aaKnown RBP19.26■□□□□ 0.67
COL1A1-205ENST00000476387 A0A0D9SFI3 127 aa19.25■□□□□ 0.67
COL1A1-205ENST00000476387 CYP2C19P33261 490 aa19.25■□□□□ 0.67
COL1A1-205ENST00000476387 TMEM132BQ14DG7 1078 aa19.25■□□□□ 0.67
COL1A1-205ENST00000476387 MCMDC2Q4G0Z9 681 aa19.25■□□□□ 0.67
COL1A1-205ENST00000476387 NCAPG2Q86XI2 1143 aa19.25■□□□□ 0.67
COL1A1-205ENST00000476387 C7orf61Q8IZ16 206 aa19.25■□□□□ 0.67
COL1A1-205ENST00000476387 FAM227BQ96M60 508 aa19.25■□□□□ 0.67
COL1A1-205ENST00000476387 PPP1R9AQ9ULJ8 1098 aa19.25■□□□□ 0.67
COL1A1-205ENST00000476387 VWA5AO00534 786 aa19.24■□□□□ 0.67
COL1A1-205ENST00000476387 COBLO75128 1261 aa19.24■□□□□ 0.67
COL1A1-205ENST00000476387 FCER1AP12319 257 aa19.24■□□□□ 0.67
COL1A1-205ENST00000476387 CYBAP13498 195 aa19.24■□□□□ 0.67
COL1A1-205ENST00000476387 COPB2P35606 906 aa19.24■□□□□ 0.67
COL1A1-205ENST00000476387 PDE4BQ07343 736 aa19.24■□□□□ 0.67
COL1A1-205ENST00000476387 NMIQ13287 307 aaPredicted RBP19.24■□□□□ 0.67
COL1A1-205ENST00000476387 FAM83BQ5T0W9 1011 aa19.24■□□□□ 0.67
COL1A1-205ENST00000476387 ZNF444Q8N0Y2 327 aaPredicted RBP19.24■□□□□ 0.67
COL1A1-205ENST00000476387 SYNPO2Q9UMS6 1093 aa19.24■□□□□ 0.67
COL1A1-205ENST00000476387 IGKV6D-41A0A0C4DH26 115 aa19.23■□□□□ 0.67
COL1A1-205ENST00000476387 MFAP1P55081 439 aaKnown RBP19.23■□□□□ 0.67
COL1A1-205ENST00000476387 PPARAQ07869 468 aa19.23■□□□□ 0.67
COL1A1-205ENST00000476387 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
COL1A1-205ENST00000476387 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
COL1A1-205ENST00000476387 TRPV1Q8NER1 839 aa19.23■□□□□ 0.67
COL1A1-205ENST00000476387 FBXO28Q9NVF7 368 aa19.23■□□□□ 0.67
COL1A1-205ENST00000476387 LAMA4Q16363 1823 aa19.23■□□□□ 0.67
COL1A1-205ENST00000476387 FRMPD3Q5JV73 1810 aa19.23■□□□□ 0.67
COL1A1-205ENST00000476387 HIP1O00291 1037 aa19.22■□□□□ 0.67
COL1A1-205ENST00000476387 RAD21O60216 631 aa19.22■□□□□ 0.67
COL1A1-205ENST00000476387 PRDM1O75626 825 aa19.22■□□□□ 0.67
COL1A1-205ENST00000476387 CNGA1P29973 690 aa19.22■□□□□ 0.67
COL1A1-205ENST00000476387 BMP8BP34820 402 aa19.22■□□□□ 0.67
COL1A1-205ENST00000476387 STAT3P40763 770 aa19.22■□□□□ 0.67
COL1A1-205ENST00000476387 DIAPH3Q9NSV4 1193 aa19.22■□□□□ 0.67
COL1A1-205ENST00000476387 ZNF214Q9UL59 606 aaPredicted RBP19.22■□□□□ 0.67
COL1A1-205ENST00000476387 COL11A1P12107 1806 aaPredicted RBP19.22■□□□□ 0.67
COL1A1-205ENST00000476387 CCDC171Q6TFL3 1326 aa19.22■□□□□ 0.67
COL1A1-205ENST00000476387 PLIN4Q96Q06 1357 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 F5H6K3 240 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 NDUFB10O96000 172 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 SDSP20132 328 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 KLRC3Q07444 240 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 VPS53Q5VIR6 699 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 REPS2Q8NFH8 660 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 MKL1Q969V6 931 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 MAML3Q96JK9 1138 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 GDF15Q99988 308 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 SLF1Q9BQI6 1058 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 CLIP2Q9UDT6 1046 aa19.21■□□□□ 0.67
COL1A1-205ENST00000476387 ZMYND8Q9ULU4 1186 aaPredicted RBP19.21■□□□□ 0.67
COL1A1-205ENST00000476387 DNM1LO00429 736 aa19.2■□□□□ 0.66
COL1A1-205ENST00000476387 FOXP2O15409 715 aa19.2■□□□□ 0.66
COL1A1-205ENST00000476387 SEPT4O43236 478 aa19.2■□□□□ 0.66
COL1A1-205ENST00000476387 TSPY3P0CV98 308 aa19.2■□□□□ 0.66
COL1A1-205ENST00000476387 TSPY8P0CW00 308 aa19.2■□□□□ 0.66
COL1A1-205ENST00000476387 PDE4AP27815 886 aa19.2■□□□□ 0.66
COL1A1-205ENST00000476387 ZNF589Q86UQ0 364 aaPredicted RBP19.2■□□□□ 0.66
COL1A1-205ENST00000476387 MMP19Q99542 508 aa19.2■□□□□ 0.66
COL1A1-205ENST00000476387 MTMR4Q9NYA4 1195 aa19.2■□□□□ 0.66
COL1A1-205ENST00000476387 NRBP1Q9UHY1 535 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms