RNA–Protein interactions for RNA: ENST00000475141.2

FRMD4A-204, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-204ENST00000475141 AFG3L2Q9Y4W6 797 aa16.46■□□□□ 0.23
FRMD4A-204ENST00000475141 CXCL11O14625 94 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 IRF6O14896 467 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 MYCP01106 439 aaPredicted RBP16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 RPS6KB1P23443 525 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 USP14P54578 494 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 ANTXR2P58335 489 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 SNAPC2Q13487 334 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 MTMR2Q13614 643 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 WTAPQ15007 396 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 RUFY3Q7L099 469 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 ENAHQ8N8S7 591 aaPredicted RBP16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 BRI3BPQ8WY22 251 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 IL17RAQ96F46 866 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 MS4A4AQ96JQ5 239 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 UPF3BQ9BZI7 483 aaKnown RBP16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 KAT14Q9H8E8 782 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 ZSWIM6Q9HCJ5 1215 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 TMOD4Q9NZQ9 345 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 CLIP2Q9UDT6 1046 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 SYNPO2Q9UMS6 1093 aa16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 KIAA0100Q14667 2235 aaKnown RBP16.45■□□□□ 0.22
FRMD4A-204ENST00000475141 CCL15-CCL14A0A0B4J2E2 113 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 C19orf81C9J6K1 198 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 RAD21O60216 631 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 C7P10643 843 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 TOP1P11387 765 aaKnown RBP16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 GTF2A2P52657 109 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 ATN1P54259 1190 aaPredicted RBP16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 BACE1P56817 501 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 TAF1CQ15572 869 aaPredicted RBP16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 ZYXQ15942 572 aaKnown RBP16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 CCL15Q16663 113 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 NKX2-3Q8TAU0 364 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 ACER1Q8TDN7 264 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 KIAA1683Q9H0B3 1180 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 BMP2KQ9NSY1 1161 aaPredicted RBP16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 KCNH4Q9UQ05 1017 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 TRPC6Q9Y210 931 aa16.44■□□□□ 0.22
FRMD4A-204ENST00000475141 PTPRFP10586 1907 aa16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 ECM2O94769 699 aaPredicted RBP16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 CPA1P15085 419 aa16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 EXOSC10Q01780 885 aaKnown RBP16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 USP17L2Q6R6M4 530 aa16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 NFXL1Q6ZNB6 911 aa16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 TMTC2Q8N394 836 aa16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 ARMC5Q96C12 935 aa16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 TCEANC2Q96MN5 208 aa16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 LRRC2Q9BYS8 371 aa16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 METRNQ9UJH8 293 aa16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 CIZ1Q9ULV3 898 aaPredicted RBP16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 TMX2Q9Y320 296 aa16.43■□□□□ 0.22
FRMD4A-204ENST00000475141 A0A0G2JLL6 359 aaPredicted RBP16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 A0A1W2PRG0 241 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 CCDC69A6NI79 296 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 SH2B2O14492 632 aaPredicted RBP16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 CETPP11597 493 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 NOVP48745 357 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 HMGCS2P54868 508 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 RABEP1Q15276 862 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 SEC23AQ15436 765 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 HABP4Q5JVS0 413 aaKnown RBP16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 RCSD1Q6JBY9 416 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 FASTKD5Q7L8L6 764 aaKnown RBP16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 PRRT2Q7Z6L0 340 aaPredicted RBP16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 ANKS1AQ92625 1134 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 LPAR1Q92633 364 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 MKL1Q969V6 931 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 TMEM47Q9BQJ4 181 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 VCPKMTQ9H867 229 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 ZFYVE28Q9HCC9 887 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
FRMD4A-204ENST00000475141 BRCA2P51587 3418 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 LIFRP42702 1097 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 NEK4P51957 841 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 GADL1Q6ZQY3 521 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 Q6ZUG5 572 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 CATIPQ7Z7H3 387 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 SIAH1Q8IUQ4 282 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 PNMA1Q8ND90 353 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 GMCL1P1Q8NEA9 526 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 IGDCC4Q8TDY8 1250 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 TMEM106CQ9BVX2 250 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 LY9Q9HBG7 655 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 ISY1Q9ULR0 285 aaKnown RBP16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 PTCH2Q9Y6C5 1203 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 RBBP6Q7Z6E9 1792 aaKnown RBP16.41■□□□□ 0.22
FRMD4A-204ENST00000475141 ZSWIM8A7E2V4 1837 aa16.4■□□□□ 0.22
FRMD4A-204ENST00000475141 COL9A3Q14050 684 aaPredicted RBP16.4■□□□□ 0.22
FRMD4A-204ENST00000475141 ANKRD1Q15327 319 aa16.4■□□□□ 0.22
FRMD4A-204ENST00000475141 SLC9C1Q4G0N8 1177 aa16.4■□□□□ 0.22
FRMD4A-204ENST00000475141 SH3D19Q5HYK7 790 aa16.4■□□□□ 0.22
FRMD4A-204ENST00000475141 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
FRMD4A-204ENST00000475141 PROCA1Q8NCQ7 364 aaPredicted RBP16.4■□□□□ 0.22
FRMD4A-204ENST00000475141 IL27Q8NEV9 243 aa16.4■□□□□ 0.22
FRMD4A-204ENST00000475141 C12orf42Q96LP6 360 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms