RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 KRT9P35527 623 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 NKX1-1Q15270 411 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-203ENST00000467558 STAG1Q8WVM7 1258 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 PPP1R9BQ96SB3 815 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 PCDHA1Q9Y5I3 950 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 GBP2P32456 591 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-203ENST00000467558 TECP42680 631 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 RESTQ13127 1097 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 SPECC1LQ69YQ0 1117 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 CYP26C1Q6V0L0 522 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 DGKHQ86XP1 1220 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 TMTC1Q8IUR5 882 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 GOLGA1Q92805 767 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 TTC14Q96N46 770 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 KANSL2Q9H9L4 492 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 TAB2Q9NYJ8 693 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 MRPL11Q9Y3B7 192 aaKnown RBP15.4■□□□□ 0.06
BRAT1-203ENST00000467558 PLEKHG2Q9H7P9 1386 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 ALX1Q15699 326 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 MTA3Q9BTC8 594 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 CPDO75976 1380 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 WDR19Q8NEZ3 1342 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 PRPF3O43395 683 aaKnown RBP15.4■□□□□ 0.06
BRAT1-203ENST00000467558 FOSP01100 380 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-203ENST00000467558 NCBP1Q09161 790 aaKnown RBP15.4■□□□□ 0.06
BRAT1-203ENST00000467558 RAPGEF1Q13905 1077 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 TIGD1Q96MW7 591 aa15.4■□□□□ 0.06
BRAT1-203ENST00000467558 GPHNQ9NQX3 736 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-203ENST00000467558 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-203ENST00000467558 LAD1O00515 517 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 GTPBP6O43824 516 aaPredicted RBP15.39■□□□□ 0.05
BRAT1-203ENST00000467558 PDIA6Q15084 440 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 TSGA10IPQ3SY00 556 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 SLC27A3Q5K4L6 730 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 MASTLQ96GX5 879 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 CSRNP1Q96S65 589 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 PNMA2Q9UL42 364 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 PCDHA4Q9UN74 947 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.39■□□□□ 0.05
BRAT1-203ENST00000467558 ITSN1Q15811 1721 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 GAS7O60861 476 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 PRDX5P30044 214 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 VPS72Q15906 364 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 AMNQ9BXJ7 453 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 TSGA10Q9BZW7 698 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 AS3MTQ9HBK9 375 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 HOMER2Q9NSB8 354 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 PCDHA5Q9Y5H7 936 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 SPATA31A1Q5TZJ5 1347 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 TMEM232C9JQI7 657 aa15.39■□□□□ 0.05
BRAT1-203ENST00000467558 CCDC169A6NNP5 214 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 SLFN12Q8IYM2 578 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 SYMPKQ92797 1274 aaKnown RBP15.38■□□□□ 0.05
BRAT1-203ENST00000467558 MRFAP1L1Q96HT8 127 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 IFT74Q96LB3 600 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 TUBBP07437 444 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 ZNF34Q8IZ26 560 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 EXOC7Q9UPT5 735 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 UTYO14607 1347 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 DCCP43146 1447 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 CSF1RP07333 972 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 HOOK3Q86VS8 718 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 SYNCQ9H7C4 482 aa15.38■□□□□ 0.05
BRAT1-203ENST00000467558 FSD2A1L4K1 749 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 hCG_1984214I3L0E3 225 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 NR5A1Q13285 461 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 PRR16Q569H4 304 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 ZNF713Q8N859 430 aaPredicted RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 DYNLL2Q96FJ2 89 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 PI4KBQ9UBF8 816 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 ARHGEF28Q8N1W1 1705 aaKnown RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 GCOM1H8Y6P7 765 aaPredicted RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 POLR3GO15318 223 aaPredicted RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 POLR2MP0CAP2 368 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 RAD51AP2Q09MP3 1159 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 PRKG1Q13976 671 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 TBC1D10CQ8IV04 446 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 MYCT1Q8N699 235 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 GSDMAQ96QA5 445 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 UIMC1Q96RL1 719 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 CSRNP2Q9H175 543 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 RIMS1Q86UR5 1692 aaKnown RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 DDX39AO00148 427 aaKnown RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 MARCH10Q8NA82 808 aaPredicted RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 CD209Q9NNX6 404 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 CCDC93Q567U6 631 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 RC3H1Q5TC82 1133 aaKnown RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 CTR9Q6PD62 1173 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 TMEM87AQ8NBN3 555 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 FNBP1Q96RU3 617 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 FTOQ9C0B1 505 aaKnown RBP eCLIP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 ALDH8A1Q9H2A2 487 aaPredicted RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 MAGEF1Q9HAY2 307 aa15.37■□□□□ 0.05
BRAT1-203ENST00000467558 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 DDX25Q9UHL0 483 aaKnown RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 V9GYY5 206 aaPredicted RBP15.37■□□□□ 0.05
BRAT1-203ENST00000467558 SCARF1Q14162 830 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 IQCDQ96DY2 449 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 CCDC113Q9H0I3 377 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 MRPL44Q9H9J2 332 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms