RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 DHX16O60231 1041 aaKnown RBP16.71■□□□□ 0.27
COL6A1-202ENST00000463060 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
COL6A1-202ENST00000463060 FDPSP14324 419 aaKnown RBP16.71■□□□□ 0.27
COL6A1-202ENST00000463060 PPIL2Q13356 520 aa16.71■□□□□ 0.27
COL6A1-202ENST00000463060 GPATCH4Q5T3I0 446 aaKnown RBP16.71■□□□□ 0.27
COL6A1-202ENST00000463060 SAPCD2Q86UD0 394 aa16.71■□□□□ 0.27
COL6A1-202ENST00000463060 LPAR1Q92633 364 aa16.71■□□□□ 0.27
COL6A1-202ENST00000463060 SLC10A4Q96EP9 437 aa16.71■□□□□ 0.27
COL6A1-202ENST00000463060 GOPCQ9HD26 462 aa16.71■□□□□ 0.27
COL6A1-202ENST00000463060 IRF6O14896 467 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 CYTH3O43739 400 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 JAK2O60674 1132 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 PLA2G6O60733 806 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 DTNBO60941 627 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 PARP1P09874 1014 aaKnown RBP16.7■□□□□ 0.26
COL6A1-202ENST00000463060 GOLGA8HP0CJ92 632 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 GNAQP50148 359 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 USP14P54578 494 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 MTMR2Q13614 643 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 MOGSQ13724 837 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 BTNL9Q6UXG8 535 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 OPTNQ96CV9 577 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 LZTS2Q9BRK4 669 aa16.7■□□□□ 0.26
COL6A1-202ENST00000463060 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.7■□□□□ 0.26
COL6A1-202ENST00000463060 PTPRFP10586 1907 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 TRIM75PA6NK02 468 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 BMP3P12645 472 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 DDIT3P35638 169 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 SLC1A4P43007 532 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 DGKZQ13574 1117 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
COL6A1-202ENST00000463060 TTBK2Q6IQ55 1244 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 SPICE1Q8N0Z3 855 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 CMTR1Q8N1G2 835 aaKnown RBP16.69■□□□□ 0.26
COL6A1-202ENST00000463060 OTUD5Q96G74 571 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 NUP88Q99567 741 aaPredicted RBP16.69■□□□□ 0.26
COL6A1-202ENST00000463060 SPZ1Q9BXG8 430 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 RIOX1Q9H6W3 641 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 MTMR7Q9Y216 660 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 TLL2Q9Y6L7 1015 aa16.69■□□□□ 0.26
COL6A1-202ENST00000463060 A0A0G2JLL6 359 aaPredicted RBP16.68■□□□□ 0.26
COL6A1-202ENST00000463060 PTPDC1A2A3K4 754 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 CPLX1O14810 134 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 WDR46O15213 610 aaKnown RBP16.68■□□□□ 0.26
COL6A1-202ENST00000463060 HMGCS2P54868 508 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 HUNKP57058 714 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 KCTD1Q719H9 257 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 PRRT2Q7Z6L0 340 aaPredicted RBP16.68■□□□□ 0.26
COL6A1-202ENST00000463060 MTMR8Q96EF0 704 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 WNK4Q96J92 1243 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 FEZ1Q99689 392 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 UBA5Q9GZZ9 404 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 GPCPD1Q9NPB8 672 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 FRMPD2Q68DX3 1309 aaPredicted RBP16.68■□□□□ 0.26
COL6A1-202ENST00000463060 CNTNAP5Q8WYK1 1306 aa16.68■□□□□ 0.26
COL6A1-202ENST00000463060 PRPF3O43395 683 aaKnown RBP16.67■□□□□ 0.26
COL6A1-202ENST00000463060 CDKL5O76039 1030 aa16.67■□□□□ 0.26
COL6A1-202ENST00000463060 FMNL1O95466 1100 aaPredicted RBP16.67■□□□□ 0.26
COL6A1-202ENST00000463060 VCAM1P19320 739 aa16.67■□□□□ 0.26
COL6A1-202ENST00000463060 FAM83BQ5T0W9 1011 aa16.67■□□□□ 0.26
COL6A1-202ENST00000463060 SPRYD7Q5W111 196 aa16.67■□□□□ 0.26
COL6A1-202ENST00000463060 CPLX2Q6PUV4 134 aaKnown RBP16.67■□□□□ 0.26
COL6A1-202ENST00000463060 SPRYD3Q8NCJ5 442 aa16.67■□□□□ 0.26
COL6A1-202ENST00000463060 PHKBQ93100 1093 aa16.67■□□□□ 0.26
COL6A1-202ENST00000463060 MS4A4AQ96JQ5 239 aa16.67■□□□□ 0.26
COL6A1-202ENST00000463060 RNF26Q9BY78 433 aaPredicted RBP16.67■□□□□ 0.26
COL6A1-202ENST00000463060 CPVLQ9H3G5 476 aa16.67■□□□□ 0.26
COL6A1-202ENST00000463060 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
COL6A1-202ENST00000463060 STK36Q9NRP7 1315 aa16.67■□□□□ 0.26
COL6A1-202ENST00000463060 TMEM88BA6NKF7 163 aa16.66■□□□□ 0.26
COL6A1-202ENST00000463060 TMEM232C9JQI7 657 aa16.66■□□□□ 0.26
COL6A1-202ENST00000463060 HMGN5P82970 282 aaKnown RBP16.66■□□□□ 0.26
COL6A1-202ENST00000463060 PKN1Q16512 942 aa16.66■□□□□ 0.26
COL6A1-202ENST00000463060 CCDC96Q2M329 555 aa16.66■□□□□ 0.26
COL6A1-202ENST00000463060 CCDC82Q8N4S0 544 aa16.66■□□□□ 0.26
COL6A1-202ENST00000463060 HHIPL1Q96JK4 782 aa16.66■□□□□ 0.26
COL6A1-202ENST00000463060 JMJD4Q9H9V9 463 aa16.66■□□□□ 0.26
COL6A1-202ENST00000463060 CWC22Q9HCG8 908 aaKnown RBP16.66■□□□□ 0.26
COL6A1-202ENST00000463060 SMC3Q9UQE7 1217 aa16.66■□□□□ 0.26
COL6A1-202ENST00000463060 BAZ2BQ9UIF8 2168 aaKnown RBP16.65■□□□□ 0.26
COL6A1-202ENST00000463060 LOC285556D6RIA3 1793 aa16.65■□□□□ 0.26
COL6A1-202ENST00000463060 PPFIA3O75145 1194 aa16.65■□□□□ 0.26
COL6A1-202ENST00000463060 ZBTB48P10074 688 aaPredicted RBP16.65■□□□□ 0.26
COL6A1-202ENST00000463060 GJB2P29033 226 aa16.65■□□□□ 0.26
COL6A1-202ENST00000463060 SLC16A2P36021 539 aa16.65■□□□□ 0.26
COL6A1-202ENST00000463060 SSRP1Q08945 709 aaKnown RBP16.65■□□□□ 0.26
COL6A1-202ENST00000463060 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
COL6A1-202ENST00000463060 ADGRF4Q8IZF3 695 aa16.65■□□□□ 0.26
COL6A1-202ENST00000463060 PROCA1Q8NCQ7 364 aaPredicted RBP16.65■□□□□ 0.26
COL6A1-202ENST00000463060 ORC3Q9UBD5 711 aaPredicted RBP16.65■□□□□ 0.26
COL6A1-202ENST00000463060 FEM1BQ9UK73 627 aa16.65■□□□□ 0.26
COL6A1-202ENST00000463060 V9GY48 417 aaPredicted RBP16.65■□□□□ 0.26
COL6A1-202ENST00000463060 RLFQ13129 1914 aa16.64■□□□□ 0.26
COL6A1-202ENST00000463060 RAD21O60216 631 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 HSP90AA1P07900 732 aaKnown RBP16.64■□□□□ 0.25
COL6A1-202ENST00000463060 HOXA7P31268 230 aaPredicted RBP16.64■□□□□ 0.25
COL6A1-202ENST00000463060 SNAPC2Q13487 334 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 GPAT2Q6NUI2 795 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 RGMBQ6NW40 437 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 CATSPERGQ6ZRH7 1159 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms