RNA–Protein interactions for RNA: ENST00000456514.1

LINC00601-201, long intergenic non-protein coding RNA 601, humanhuman

TSL 3 BASIC

Gene LINC00601, Length 1,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00601-201ENST00000456514 NPHP3Q7Z494 1330 aa7.53□□□□□ -1.2
LINC00601-201ENST00000456514 COL22A1Q8NFW1 1626 aaPredicted RBP7.53□□□□□ -1.2
LINC00601-201ENST00000456514 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
LINC00601-201ENST00000456514 GNAT3A8MTJ3 354 aa7.53□□□□□ -1.2
LINC00601-201ENST00000456514 IGF2BP3O00425 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
LINC00601-201ENST00000456514 CPNE3O75131 537 aaKnown RBP7.53□□□□□ -1.2
LINC00601-201ENST00000456514 BUD31P41223 144 aaPredicted RBP7.53□□□□□ -1.2
LINC00601-201ENST00000456514 FAAP100Q0VG06 881 aa7.53□□□□□ -1.2
LINC00601-201ENST00000456514 SPACA3Q8IXA5 215 aa7.53□□□□□ -1.2
LINC00601-201ENST00000456514 USTQ9Y2C2 406 aa7.53□□□□□ -1.2
LINC00601-201ENST00000456514 LRPPRCP42704 1394 aaKnown RBP7.53□□□□□ -1.2
LINC00601-201ENST00000456514 PPLO60437 1756 aa7.53□□□□□ -1.2
LINC00601-201ENST00000456514 PPP2R3AQ06190 1150 aa7.52□□□□□ -1.21
LINC00601-201ENST00000456514 TMEM132EQ6IEE7 984 aa7.52□□□□□ -1.21
LINC00601-201ENST00000456514 PRPF40BQ6NWY9 871 aaKnown RBP7.52□□□□□ -1.21
LINC00601-201ENST00000456514 FBXO15Q8NCQ5 510 aaPredicted RBP7.52□□□□□ -1.21
LINC00601-201ENST00000456514 RNF214Q8ND24 703 aa7.52□□□□□ -1.21
LINC00601-201ENST00000456514 DIRC2Q96SL1 478 aa7.52□□□□□ -1.21
LINC00601-201ENST00000456514 RAPGEFL1Q9UHV5 662 aa7.52□□□□□ -1.21
LINC00601-201ENST00000456514 GPN3Q9UHW5 284 aaPredicted RBP7.52□□□□□ -1.21
LINC00601-201ENST00000456514 TRAK1Q9UPV9 953 aa7.52□□□□□ -1.21
LINC00601-201ENST00000456514 SPATA31A3Q5VYP0 1347 aa7.52□□□□□ -1.21
LINC00601-201ENST00000456514 CDC42BPGQ6DT37 1551 aa7.51□□□□□ -1.21
LINC00601-201ENST00000456514 ANKRD30BQ9BXX2 1392 aa7.51□□□□□ -1.21
LINC00601-201ENST00000456514 ORC1Q13415 861 aa7.51□□□□□ -1.21
LINC00601-201ENST00000456514 NKPD1Q17RQ9 610 aa7.51□□□□□ -1.21
LINC00601-201ENST00000456514 MPHOSPH9Q99550 1183 aa7.51□□□□□ -1.21
LINC00601-201ENST00000456514 C14orf93Q9H972 538 aaKnown RBP7.51□□□□□ -1.21
LINC00601-201ENST00000456514 PRDM10Q9NQV6 1147 aa7.51□□□□□ -1.21
LINC00601-201ENST00000456514 PLEKHH1Q9ULM0 1364 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 NPIPB6E9PJ23 425 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 TMEM253P0C7T8 217 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 CLCN7P51798 805 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 ERVK-24P63145 666 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 XPCQ01831 940 aaPredicted RBP7.5□□□□□ -1.21
LINC00601-201ENST00000456514 RGL3Q3MIN7 710 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 FAM214BQ7L5A3 538 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 NSUN3Q9H649 340 aaKnown RBP7.5□□□□□ -1.21
LINC00601-201ENST00000456514 CARS2Q9HA77 564 aaKnown RBP7.5□□□□□ -1.21
LINC00601-201ENST00000456514 TMEM39AQ9NV64 488 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 STK26Q9P289 416 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 SLIT2O94813 1529 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 PIK3C2GO75747 1445 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 PITPNM2Q9BZ72 1349 aa7.5□□□□□ -1.21
LINC00601-201ENST00000456514 PATL2C9JE40 543 aaKnown RBP7.49□□□□□ -1.21
LINC00601-201ENST00000456514 KRT1P04264 644 aa7.49□□□□□ -1.21
LINC00601-201ENST00000456514 ZC3H12AQ5D1E8 599 aaKnown RBP7.49□□□□□ -1.21
LINC00601-201ENST00000456514 DTHD1Q6ZMT9 781 aa7.49□□□□□ -1.21
LINC00601-201ENST00000456514 UNC5CLQ8IV45 518 aa7.49□□□□□ -1.21
LINC00601-201ENST00000456514 CCDC144AA2RUR9 1427 aa7.49□□□□□ -1.21
LINC00601-201ENST00000456514 NRXN1Q9ULB1 1477 aa7.49□□□□□ -1.21
LINC00601-201ENST00000456514 TMEM88BA6NKF7 163 aa7.48□□□□□ -1.21
LINC00601-201ENST00000456514 INHBBP09529 407 aa7.48□□□□□ -1.21
LINC00601-201ENST00000456514 PDE3BQ13370 1112 aa7.48□□□□□ -1.21
LINC00601-201ENST00000456514 KRT28Q7Z3Y7 464 aa7.48□□□□□ -1.21
LINC00601-201ENST00000456514 PDZD3Q86UT5 571 aa7.48□□□□□ -1.21
LINC00601-201ENST00000456514 AMIGO3Q86WK7 504 aa7.48□□□□□ -1.21
LINC00601-201ENST00000456514 CCDC74AQ96AQ1 378 aa7.48□□□□□ -1.21
LINC00601-201ENST00000456514 ACSBG1Q96GR2 724 aa7.48□□□□□ -1.21
LINC00601-201ENST00000456514 YTHDC2Q9H6S0 1430 aaKnown RBP7.48□□□□□ -1.21
LINC00601-201ENST00000456514 PICK1Q9NRD5 415 aa7.48□□□□□ -1.21
LINC00601-201ENST00000456514 IFT172Q9UG01 1749 aa7.47□□□□□ -1.21
LINC00601-201ENST00000456514 MARF1Q9Y4F3 1742 aaKnown RBP7.47□□□□□ -1.21
LINC00601-201ENST00000456514 NDUFB5O43674 189 aa7.47□□□□□ -1.21
LINC00601-201ENST00000456514 GDNFP39905 211 aa7.47□□□□□ -1.21
LINC00601-201ENST00000456514 VPS72Q15906 364 aa7.47□□□□□ -1.21
LINC00601-201ENST00000456514 MAP1SQ66K74 1059 aaPredicted RBP7.47□□□□□ -1.21
LINC00601-201ENST00000456514 CIAPIN1Q6FI81 312 aa7.47□□□□□ -1.21
LINC00601-201ENST00000456514 SULF2Q8IWU5 870 aa7.47□□□□□ -1.21
LINC00601-201ENST00000456514 CTSWP56202 376 aa7.46□□□□□ -1.22
LINC00601-201ENST00000456514 GRM2Q14416 872 aa7.46□□□□□ -1.22
LINC00601-201ENST00000456514 KCNA10Q16322 511 aa7.46□□□□□ -1.22
LINC00601-201ENST00000456514 AEBP1Q8IUX7 1158 aa7.46□□□□□ -1.22
LINC00601-201ENST00000456514 FOXQ1Q9C009 403 aa7.46□□□□□ -1.22
LINC00601-201ENST00000456514 PRDM5Q9NQX1 630 aaPredicted RBP7.46□□□□□ -1.22
LINC00601-201ENST00000456514 PPP4R2Q9NY27 417 aa7.46□□□□□ -1.22
LINC00601-201ENST00000456514 CCDC9Q9Y3X0 531 aaKnown RBP7.46□□□□□ -1.22
LINC00601-201ENST00000456514 RALGAPBQ86X10 1494 aa7.46□□□□□ -1.22
LINC00601-201ENST00000456514 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.46□□□□□ -1.22
LINC00601-201ENST00000456514 FMN2Q9NZ56 1722 aa7.46□□□□□ -1.22
LINC00601-201ENST00000456514 GLI3P10071 1580 aa7.46□□□□□ -1.22
LINC00601-201ENST00000456514 SBNO1A3KN83 1393 aa7.46□□□□□ -1.22
LINC00601-201ENST00000456514 KNDC1Q76NI1 1749 aa7.45□□□□□ -1.22
LINC00601-201ENST00000456514 FAM83GA6ND36 823 aa7.45□□□□□ -1.22
LINC00601-201ENST00000456514 TCAF2A6NFQ2 919 aa7.45□□□□□ -1.22
LINC00601-201ENST00000456514 FAM155AB1AL88 458 aaPredicted RBP7.45□□□□□ -1.22
LINC00601-201ENST00000456514 BRD1O95696 1058 aa7.45□□□□□ -1.22
LINC00601-201ENST00000456514 ARNTP27540 789 aa7.45□□□□□ -1.22
LINC00601-201ENST00000456514 FCGRTP55899 365 aa7.45□□□□□ -1.22
LINC00601-201ENST00000456514 ATG14Q6ZNE5 492 aa7.45□□□□□ -1.22
LINC00601-201ENST00000456514 DNAJC25Q9H1X3 360 aa7.45□□□□□ -1.22
LINC00601-201ENST00000456514 EPB41L4BQ9H329 900 aa7.45□□□□□ -1.22
LINC00601-201ENST00000456514 DCP1AQ9NPI6 582 aaPredicted RBP7.45□□□□□ -1.22
LINC00601-201ENST00000456514 CSADQ9Y600 493 aa7.45□□□□□ -1.22
LINC00601-201ENST00000456514 RGPD8O14715 1765 aaPredicted RBP7.44□□□□□ -1.22
LINC00601-201ENST00000456514 EIF1AYO14602 144 aaKnown RBP7.44□□□□□ -1.22
LINC00601-201ENST00000456514 ICMTO60725 284 aa7.44□□□□□ -1.22
LINC00601-201ENST00000456514 KCNA1Q09470 495 aa7.44□□□□□ -1.22
LINC00601-201ENST00000456514 PPM1JQ5JR12 505 aa7.44□□□□□ -1.22
LINC00601-201ENST00000456514 PHLDB3Q6NSJ2 640 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms