RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 ISCA1Q9BUE6 129 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 FAM184BQ9ULE4 1060 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 IQSEC3Q9UPP2 1182 aaPredicted RBP15.4■□□□□ 0.06
PTPRE-204ENST00000455661 LRP6O75581 1613 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 TTC26A0AVF1 554 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 H7C1D1 291 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 AGPSO00116 658 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 CYLC1P35663 651 aaPredicted RBP15.4■□□□□ 0.06
PTPRE-204ENST00000455661 LIG3P49916 1009 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 AMOTL1Q8IY63 956 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 BCAS4Q8TDM0 211 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 STAMQ92783 540 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 DNAJC7Q99615 494 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 MTA3Q9BTC8 594 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 RNF26Q9BY78 433 aaPredicted RBP15.4■□□□□ 0.06
PTPRE-204ENST00000455661 BLZF1Q9H2G9 400 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 TCRBV5S4A2TA0A5A2 114 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 ANO9A1A5B4 782 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 A6NNZ2 444 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 GTPBP6O43824 516 aaPredicted RBP15.39■□□□□ 0.05
PTPRE-204ENST00000455661 OPA1O60313 960 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 UQCRFS1P1P0C7P4 283 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 HERVK_113P62684 666 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 TCIRG1Q13488 830 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 TUBB8Q3ZCM7 444 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 ZNF658Q5TYW1 1059 aaPredicted RBP15.39■□□□□ 0.05
PTPRE-204ENST00000455661 MB21D1Q8N884 522 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 GNL3LQ9NVN8 582 aaKnown RBP15.39■□□□□ 0.05
PTPRE-204ENST00000455661 ZNHIT6Q9NWK9 470 aaKnown RBP15.39■□□□□ 0.05
PTPRE-204ENST00000455661 RIPOR2Q9Y4F9 1068 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 BCL9LQ86UU0 1499 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 A0A1W2PQC6 194 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 PES1O00541 588 aaKnown RBP15.39■□□□□ 0.05
PTPRE-204ENST00000455661 CSF1RP07333 972 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 PPP2R5BQ15173 497 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 GSPT2Q8IYD1 628 aaKnown RBP15.39■□□□□ 0.05
PTPRE-204ENST00000455661 ZNF654Q8IZM8 581 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 PLA2G12BQ9BX93 195 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 NACAP1Q9BZK3 213 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 EPB41L4AQ9HCS5 686 aaPredicted RBP15.39■□□□□ 0.05
PTPRE-204ENST00000455661 CNNM1Q9NRU3 951 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 CAPN11Q9UMQ6 739 aa15.39■□□□□ 0.05
PTPRE-204ENST00000455661 FAM205CA6NFA0 338 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 EIF3HO15372 352 aaKnown RBP eCLIP15.38■□□□□ 0.05
PTPRE-204ENST00000455661 PCCAP05165 728 aaPredicted RBP15.38■□□□□ 0.05
PTPRE-204ENST00000455661 XDHP47989 1333 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 GNGT1P63211 74 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 PKD1L3Q7Z443 1732 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 STAG1Q8WVM7 1258 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 RUBCNQ92622 972 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 FAM89AQ96GI7 184 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 JADE2Q9NQC1 790 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 AKAP11Q9UKA4 1901 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 MBD4O95243 580 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 PARP1P09874 1014 aaKnown RBP15.38■□□□□ 0.05
PTPRE-204ENST00000455661 IDEP14735 1019 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 INPP5BP32019 993 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 TDO2P48775 406 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 SF3B2Q13435 895 aaKnown RBP15.38■□□□□ 0.05
PTPRE-204ENST00000455661 ZNF174Q15697 407 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 E2F4Q16254 413 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 AENQ8WTP8 325 aaKnown RBP15.38■□□□□ 0.05
PTPRE-204ENST00000455661 UBAC1Q9BSL1 405 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 VPS54Q9P1Q0 977 aa15.38■□□□□ 0.05
PTPRE-204ENST00000455661 RIC1Q4ADV7 1423 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 LOC102724159A0A0B4J2E5 919 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 MYBL2P10244 700 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 MNAT1P51948 309 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 MAP3K12Q12852 859 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 PWP2Q15269 919 aaKnown RBP15.37■□□□□ 0.05
PTPRE-204ENST00000455661 RUFY1Q96T51 708 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 PHF20Q9BVI0 1012 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 RNF41Q9H4P4 317 aaPredicted RBP15.37■□□□□ 0.05
PTPRE-204ENST00000455661 LGALS16A8MUM7 142 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 SETQ01105 290 aaPredicted RBP15.37■□□□□ 0.05
PTPRE-204ENST00000455661 C2orf54Q08AI8 447 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 TTC38Q5R3I4 469 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 SND1Q7KZF4 910 aaKnown RBP eCLIP15.37■□□□□ 0.05
PTPRE-204ENST00000455661 ANKRD18AQ8IVF6 992 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 GPATCH11Q8N954 259 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 MAGEC2Q9UBF1 373 aaPredicted RBP15.37■□□□□ 0.05
PTPRE-204ENST00000455661 TACC3Q9Y6A5 838 aa15.37■□□□□ 0.05
PTPRE-204ENST00000455661 GLI3P10071 1580 aa15.36■□□□□ 0.05
PTPRE-204ENST00000455661 RTL9Q8NET4 1388 aa15.36■□□□□ 0.05
PTPRE-204ENST00000455661 CHD4Q14839 1912 aa15.36■□□□□ 0.05
PTPRE-204ENST00000455661 RPN1P04843 607 aaKnown RBP15.36■□□□□ 0.05
PTPRE-204ENST00000455661 GNAT2P19087 354 aa15.36■□□□□ 0.05
PTPRE-204ENST00000455661 EEF1GP26641 437 aaKnown RBP15.36■□□□□ 0.05
PTPRE-204ENST00000455661 ARID4AP29374 1257 aaPredicted RBP15.36■□□□□ 0.05
PTPRE-204ENST00000455661 TRIM28Q13263 835 aaKnown RBP15.36■□□□□ 0.05
PTPRE-204ENST00000455661 B4GALNT4Q76KP1 1039 aa15.36■□□□□ 0.05
PTPRE-204ENST00000455661 CCDC170Q8IYT3 715 aa15.36■□□□□ 0.05
PTPRE-204ENST00000455661 FNBP4Q8N3X1 1017 aaPredicted RBP15.36■□□□□ 0.05
PTPRE-204ENST00000455661 MAGEB6Q8N7X4 407 aa15.36■□□□□ 0.05
PTPRE-204ENST00000455661 ZBTB38Q8NAP3 1195 aaPredicted RBP15.36■□□□□ 0.05
PTPRE-204ENST00000455661 ARMT1Q9H993 441 aa15.36■□□□□ 0.05
PTPRE-204ENST00000455661 TFR2Q9UP52 801 aa15.36■□□□□ 0.05
PTPRE-204ENST00000455661 ANKRD18BA2A2Z9 1011 aa15.35■□□□□ 0.05
PTPRE-204ENST00000455661 ZNF185O15231 689 aa15.35■□□□□ 0.05
PTPRE-204ENST00000455661 ITGA6P23229 1130 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms