RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ZHX2Q9Y6X8 837 aa5.79□□□□□ -1.48
GTF3C3-208ENST00000455546 PHIPQ8WWQ0 1821 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 SALL1Q9NSC2 1324 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 PTPRFP10586 1907 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 FAM196BA6NMK8 535 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 ERVH48-1M5A8F1 160 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 IPO8O15397 1037 aaKnown RBP5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 WDHD1O75717 1129 aaPredicted RBP5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 GNAI2P04899 355 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 PTPRAP18433 802 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 BTDP43251 543 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 PSMC4P43686 418 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 CENPFP49454 3210 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 CLDN10P78369 228 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 G3BP1Q13283 466 aaKnown RBP eCLIP5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 KIF22Q14807 665 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 MTFR1Q15390 333 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 SLC4A8Q2Y0W8 1093 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 MAP7D1Q3KQU3 841 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 SLC9C1Q4G0N8 1177 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 GORABQ5T7V8 394 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 GPAT2Q6NUI2 795 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 C17orf99Q6UX52 265 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 NBPF11Q86T75 865 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 DZIP1Q86YF9 867 aaKnown RBP5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 SPATA5Q8NB90 893 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 ARMC5Q96C12 935 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 ZNF333Q96JL9 665 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 MRGPRX2Q96LB1 330 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 IDI2Q9BXS1 227 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 RAI14Q9P0K7 980 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 KCNH4Q9UQ05 1017 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 NOD1Q9Y239 953 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 AKAP2Q9Y2D5 859 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 DOCK2Q92608 1830 aa5.78□□□□□ -1.48
GTF3C3-208ENST00000455546 GAKO14976 1311 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 CDK5RAP2Q96SN8 1893 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 GPR75-ASB3A0A0A6YYF3 556 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 TRIM75PA6NK02 468 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 ENTPD3O75355 529 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 MCAMP43121 646 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 RHBDL3P58872 404 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 ATP8B2P98198 1209 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 HNRNPUQ00839 825 aaKnown RBP eCLIP5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 DPYDQ12882 1025 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 PTK7Q13308 1070 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 MTX1Q13505 466 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 RRP1BQ14684 758 aaKnown RBP5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 MVPQ14764 893 aaKnown RBP5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 ARHGEF6Q15052 776 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 NOL9Q5SY16 702 aaKnown RBP5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 ZNF697Q5TEC3 545 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 RNF20Q5VTR2 975 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 ZKSCAN2Q63HK3 967 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 SPTY2D1Q68D10 685 aaPredicted RBP5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 GADL1Q6ZQY3 521 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 ANKRD23Q86SG2 305 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 SCYL3Q8IZE3 742 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 ZGPATQ8N5A5 531 aaKnown RBP5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 NSUN4Q96CB9 384 aaKnown RBP5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 TRIM47Q96LD4 638 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 BCL11AQ9H165 835 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 CYLDQ9NQC7 956 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 PICK1Q9NRD5 415 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 DNAAF2Q9NVR5 837 aaKnown RBP5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 LRP2BPQ9P2M1 347 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 CDV3Q9UKY7 258 aaKnown RBP5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 GABRQQ9UN88 632 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 USTQ9Y2C2 406 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 AFG3L2Q9Y4W6 797 aa5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 RPAP1Q9BWH6 1393 aaPredicted RBP5.77□□□□□ -1.49
GTF3C3-208ENST00000455546 MROH7-TTC4A0A0A0MT08 1334 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 ATAD5Q96QE3 1844 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 RBBP6Q7Z6E9 1792 aaKnown RBP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 CXCL11O14625 94 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 ZBTB7BO15156 539 aaPredicted RBP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 TNRC18O15417 2968 aaPredicted RBP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 CTNND1O60716 968 aaKnown RBP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 SURF6O75683 361 aaKnown RBP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 STAU1O95793 577 aaKnown RBP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 LDHCP07864 332 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 RLBP1P12271 317 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 MAP3K10Q02779 954 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 SPP2Q13103 211 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 OS9Q13438 667 aaPredicted RBP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 SH3RF3Q8TEJ3 882 aaPredicted RBP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 DBNDD2Q9BQY9 259 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 PRKD2Q9BZL6 878 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 CCDC8Q9H0W5 538 aaPredicted RBP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 AATFQ9NY61 560 aaKnown RBP eCLIP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 SRRDQ9UH36 339 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 MAP4K5Q9Y4K4 846 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 BRCA2P51587 3418 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 ATRNL1Q5VV63 1379 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 MKI67P46013 3256 aaKnown RBP5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 MYH1P12882 1939 aa5.76□□□□□ -1.49
GTF3C3-208ENST00000455546 ADGRA2Q96PE1 1338 aa5.75□□□□□ -1.49
GTF3C3-208ENST00000455546 DOCK1Q14185 1865 aa5.75□□□□□ -1.49
GTF3C3-208ENST00000455546 A0A0G2JLL6 359 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms