RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 RLFQ13129 1914 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 RPAP1Q9BWH6 1393 aaPredicted RBP7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 KIAA0355O15063 1070 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 MYL6BP14649 208 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 ATP2B4P23634 1241 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 USP4Q13107 963 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 INTS6LQ5JSJ4 861 aaKnown RBP7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 C1orf53Q5VUE5 145 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 BMP8AQ7Z5Y6 402 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 PRRX2Q99811 253 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 TMEM39BQ9GZU3 492 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 SEC31BQ9NQW1 1179 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 AAASQ9NRG9 546 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 DOLKQ9UPQ8 538 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 YBX2Q9Y2T7 364 aaKnown RBP7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 MAFBQ9Y5Q3 323 aaPredicted RBP7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 PLXNB2O15031 1838 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 ECM29Q5VYK3 1845 aa7.01□□□□□ -1.29
SBDSP1-204ENST00000453858 MED23Q9ULK4 1368 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 PRR23AA6NEV1 266 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 XRCC5P13010 732 aaKnown RBP7□□□□□ -1.29
SBDSP1-204ENST00000453858 ST3GAL2Q16842 350 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 EML3Q32P44 896 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 TRIM60Q495X7 471 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 TBC1D9Q6ZT07 1266 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 CCDC116Q8IYX3 515 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 MICALL1Q8N3F8 863 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 RMDN1Q96DB5 314 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 SIN3AQ96ST3 1273 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 BUD13Q9BRD0 619 aaKnown RBP eCLIP7□□□□□ -1.29
SBDSP1-204ENST00000453858 COA1Q9GZY4 146 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 PRDM5Q9NQX1 630 aaPredicted RBP7□□□□□ -1.29
SBDSP1-204ENST00000453858 PGPEP1Q9NXJ5 209 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 ZNF70Q9UC06 446 aaPredicted RBP7□□□□□ -1.29
SBDSP1-204ENST00000453858 XDHP47989 1333 aa7□□□□□ -1.29
SBDSP1-204ENST00000453858 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 USP17L5A8MUK1 530 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 ATP5J2-PTCD1G3V325 749 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 DNM1LO00429 736 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 CXCL11O14625 94 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 MYO1BO43795 1136 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 FSHRP23945 695 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 SMCPP49901 116 aaPredicted RBP6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 GTF2IP78347 998 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 TLE2Q04725 743 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 TMEM240Q5SV17 173 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 KRT40Q6A162 431 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 TRIM50Q86XT4 487 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 USP6NLQ92738 828 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 PBXIP1Q96AQ6 731 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 FAM89AQ96GI7 184 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 WRNIP1Q96S55 665 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 NKX2-4Q9H2Z4 354 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 VRTNQ9H8Y1 702 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 ZNF112Q9UJU3 913 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 SLC45A1Q9Y2W3 748 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 TENM4Q6N022 2769 aa6.99□□□□□ -1.29
SBDSP1-204ENST00000453858 MYO18BQ8IUG5 2567 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 ERVH48-1M5A8F1 160 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 RFXAPO00287 272 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 PIK3CDO00329 1044 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 INPP5BP32019 993 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 FPGSQ05932 587 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 CTC1Q2NKJ3 1217 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 PROSER3Q2NL68 480 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 DGLUCYQ7Z3D6 616 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 ANKRD13CQ8N6S4 541 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 GAS2L2Q8NHY3 880 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 LPAR1Q92633 364 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 ARID3AQ99856 593 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 NOD1Q9Y239 953 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 PCDHB11Q9Y5F2 797 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 TACC3Q9Y6A5 838 aa6.98□□□□□ -1.29
SBDSP1-204ENST00000453858 A0A0G2JLL6 359 aaPredicted RBP6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 A0A0G2JMZ2 1700 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 ATP1A2P50993 1020 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 PDE4CQ08493 712 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 TNFAIP1Q13829 316 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 RAB30Q15771 203 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 FAM110CQ1W6H9 321 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 USP17L2Q6R6M4 530 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 CCDC129Q6ZRS4 1044 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 PRRT2Q7Z6L0 340 aaPredicted RBP6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 ZNF428Q96B54 188 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 CCDC85AQ96PX6 553 aaPredicted RBP6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 THUMPD2Q9BTF0 503 aaKnown RBP6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 SLC28A3Q9HAS3 691 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 BSDC1Q9NW68 430 aaPredicted RBP6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 AK9Q5TCS8 1911 aa6.97□□□□□ -1.29
SBDSP1-204ENST00000453858 PTPN13Q12923 2485 aa6.96□□□□□ -1.29
SBDSP1-204ENST00000453858 EPOPA6NHQ4 379 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 CYSRT1A8MQ03 144 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 KALRNO60229 2985 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 IGHA2P01877 340 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 CYP2B6P20813 491 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 KLRK1P26718 216 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 NBL1P41271 181 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 NNTQ13423 1086 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 NCOA4Q13772 614 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms