RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SLC44A5Q8NCS7 719 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 CAGE1Q8TC20 777 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TRIM47Q96LD4 638 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 EFCC1Q9HA90 598 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 ATP8A2Q9NTI2 1148 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 FANCLQ9NW38 375 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TMOD4Q9NZQ9 345 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 SCAF8Q9UPN6 1271 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 UBN2Q6ZU65 1347 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 BACH1O14867 736 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 COBLO75128 1261 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 GPSM2P81274 684 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 AXDND1Q5T1B0 1012 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 IQUBQ8NA54 791 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TDRD3Q9H7E2 651 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 SERPINB13Q9UIV8 391 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 CCNT1O60563 726 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TBCAO75347 108 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 IFNAR1P17181 557 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 GOLGA8FQ08AF8 430 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 GOLGA8DPQ0D2H9 430 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TNFAIP1Q13829 316 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 CCDC40Q4G0X9 1142 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 INTS5Q6P9B9 1019 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 KIAA1524Q8TCG1 905 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 PAGR1Q9BTK6 254 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 TAOK3Q9H2K8 898 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 CASQ1P31415 396 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 AMPD3Q01432 767 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 PPP4R3AQ6IN85 833 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 CTR9Q6PD62 1173 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 ERMNQ8TAM6 284 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 PCDHB6Q9Y5E3 794 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 UBE2Q2LH0YL09 131 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 LIFRP42702 1097 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 TRAF1Q13077 416 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 ICE2Q659A1 982 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 VTI1AQ96AJ9 217 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 EXOC1Q9NV70 894 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 SEMA3EO15041 775 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 FMNL1O95466 1100 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 SLC16A2P36021 539 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 TBC1D10BQ4KMP7 808 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 CC2D2BQ6DHV5 1058 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 CACNA2D4Q7Z3S7 1137 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 LRRC8AQ8IWT6 810 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 RASGRP4Q8TDF6 673 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 BIN2Q9UBW5 565 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 MYO1CO00159 1063 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 GUCY1A2P33402 732 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 USP8P40818 1118 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 DNA2P51530 1060 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 LONRF3Q496Y0 759 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 SH3RF3Q8TEJ3 882 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-210ENST00000444502 TSG101Q99816 390 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 BRIP1Q9BX63 1249 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 VPS16Q9H269 839 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 NFAT5O94916 1531 aa11.89□□□□□ -0.51
TOP3B-210ENST00000444502 H0YHG0 523 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 PLEKHA8P1O95397 391 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 ERCC3P19447 782 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 CDC25AP30304 524 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 LRP10Q7Z4F1 713 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 SRRTQ9BXP5 876 aaKnown RBP11.88□□□□□ -0.51
TOP3B-210ENST00000444502 NMT2O60551 498 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 ABCB5Q2M3G0 1257 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 TMC4Q7Z404 712 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 KIAA1328Q86T90 577 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
TOP3B-210ENST00000444502 ANKRD7Q92527 254 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 LZTFL1Q9NQ48 299 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 CSADQ9Y600 493 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 SORBS3O60504 671 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 NTSR2O95665 410 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
TOP3B-210ENST00000444502 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 FBXO38Q6PIJ6 1188 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 KCTD1Q719H9 257 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 MAEAQ7L5Y9 396 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 MRFAP1L1Q96HT8 127 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 CSRNP2Q9H175 543 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 CPVLQ9H3G5 476 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 JRKLQ9Y4A0 524 aa11.88□□□□□ -0.51
TOP3B-210ENST00000444502 KIF5CO60282 957 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 ALAS1P13196 640 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 FMR1NBQ8N0W7 255 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-210ENST00000444502 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 MXD3Q9BW11 206 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 CTNND2Q9UQB3 1225 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms