RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 MKRN2Q9H000 416 aaKnown RBP6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 SLC52A2Q9HAB3 445 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 NDOR1Q9UHB4 597 aa6.1□□□□□ -1.43
NUDCD1-202ENST00000427660 E2F8A0AVK6 867 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 KATNA1O75449 491 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 ITGA4P13612 1032 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 IGFALSP35858 605 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 MAP4K2Q12851 820 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 STRN3Q13033 797 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 NBPF12Q5TAG4 269 aaPredicted RBP6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 PRAMEF13Q5VWM6 474 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 PKN3Q6P5Z2 889 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 MAMDC2Q7Z304 686 aaPredicted RBP6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 WDR75Q8IWA0 830 aaKnown RBP6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 C7orf61Q8IZ16 206 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 PMM1Q92871 262 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 DPH2Q9BQC3 489 aaPredicted RBP6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 PUS7LQ9H0K6 701 aaKnown RBP6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 SUGCTQ9HAC7 445 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 AKT3Q9Y243 479 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 ZNF451Q9Y4E5 1061 aa6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 TNPO3Q9Y5L0 923 aaKnown RBP6.09□□□□□ -1.43
NUDCD1-202ENST00000427660 B4E1Z4 1266 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 CAND2O75155 1236 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 GNALP38405 381 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 NEK4P51957 841 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 AUHQ13825 339 aaKnown RBP6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 ANKLE2Q86XL3 938 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 SPATS2Q86XZ4 545 aaKnown RBP6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 MFSD2AQ8NA29 543 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 KCTD13Q8WZ19 329 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 GSX1Q9H4S2 264 aaPredicted RBP6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 GP6Q9HCN6 339 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 SHOXO15266 292 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 TBX1O43435 398 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 OPA1O60313 960 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 DLX3O60479 287 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 MTMR1Q13613 665 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 TTLL4Q14679 1199 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 STAT4Q14765 748 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 CAMKK2Q96RR4 588 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 TTC1Q99614 292 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 FOXQ1Q9C009 403 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 MTFR1LQ9H019 292 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 CYP4F12Q9HCS2 524 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 KCNK4Q9NYG8 393 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 SPEF1Q9Y4P9 236 aa6.08□□□□□ -1.44
NUDCD1-202ENST00000427660 SHTN1A0MZ66 631 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 ZEB2O60315 1214 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 LRIG2O94898 1065 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 SCGB1D2O95969 90 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 NEFMP07197 916 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 RHBDL3P58872 404 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 PCBP1Q15365 356 aaKnown RBP eCLIP6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 DUOXA2Q1HG44 320 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 CHSY3Q70JA7 882 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 NPAS3Q8IXF0 933 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 PPP1R13LQ8WUF5 828 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 VWCEQ96DN2 955 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 ZNF512BQ96KM6 892 aaPredicted RBP6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 ORAI3Q9BRQ5 295 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 PRR13Q9NZ81 148 aa6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 CGGBP1Q9UFW8 167 aaPredicted RBP6.07□□□□□ -1.44
NUDCD1-202ENST00000427660 DEAF1O75398 565 aaPredicted RBP6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 APPP05067 770 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 ADH5P11766 374 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 NID1P14543 1247 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 HOXC12P31275 282 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 RAB27AP51159 221 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 GFRA1P56159 465 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 SRSF11Q05519 484 aaKnown RBP6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 GRB10Q13322 594 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 C8orf86Q6ZUL3 223 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 UBE2R2Q712K3 238 aaPredicted RBP6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 FGD2Q7Z6J4 655 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 DMRTC2Q8IXT2 367 aaPredicted RBP6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 SMG8Q8ND04 991 aaKnown RBP6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 BTN2A2Q8WVV5 523 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 ISL2Q96A47 359 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 CHMP4CQ96CF2 233 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 MAGEB10Q96LZ2 347 aaPredicted RBP6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 LGR4Q9BXB1 951 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 RNF208Q9H0X6 261 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 AP4E1Q9UPM8 1137 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 CEP131Q9UPN4 1083 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 DIS3Q9Y2L1 958 aaKnown RBP6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 FHOD1Q9Y613 1164 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 C11orf95C9JLR9 678 aaPredicted RBP6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 AKAP10O43572 662 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 PLIN1O60240 522 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 SCG5P05408 212 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 NAT1P18440 290 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 ITKQ08881 620 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 BIRC2Q13490 618 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 UBE4AQ14139 1066 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 NUTM2GQ5VZR2 741 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 CHPFQ8IZ52 775 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 UBASH3BQ8TF42 649 aa6.06□□□□□ -1.44
NUDCD1-202ENST00000427660 USP7Q93009 1102 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms