RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 ERCC3P19447 782 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 KRT9P35527 623 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 CTCFLQ8NI51 663 aaPredicted RBP16.25■□□□□ 0.19
ERCC3-202ENST00000426778 TNFRSF25Q93038 417 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 FAM84BQ96KN1 310 aaPredicted RBP16.25■□□□□ 0.19
ERCC3-202ENST00000426778 GDAP1L1Q96MZ0 367 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 PDE11AQ9HCR9 933 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 LOC102724428A0A0B4J2F2 783 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 PRCPP42785 496 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 SIK1P57059 783 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 UBXN1Q04323 297 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 ELOA2Q8IYF1 753 aaPredicted RBP16.25■□□□□ 0.19
ERCC3-202ENST00000426778 RABGGTAQ92696 567 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 DYNLL2Q96FJ2 89 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 GSDMAQ96QA5 445 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 NID2Q14112 1375 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 TSPY2A6NKD2 308 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 USP17L8P0C7I0 530 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 COPB1P53618 953 aaKnown RBP16.25■□□□□ 0.19
ERCC3-202ENST00000426778 MECOMQ03112 1051 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 E2F4Q16254 413 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 SRGAP1Q7Z6B7 1085 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 ANKRD18AQ8IVF6 992 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 NOA1Q8NC60 698 aaKnown RBP16.25■□□□□ 0.19
ERCC3-202ENST00000426778 ABHD10Q9NUJ1 306 aa16.25■□□□□ 0.19
ERCC3-202ENST00000426778 KCNJ18B7U540 433 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 SRGAP2O75044 1071 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 ATP2C1P98194 919 aaPredicted RBP16.24■□□□□ 0.19
ERCC3-202ENST00000426778 KCNJ12Q14500 433 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 TYW1BQ6NUM6 668 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 RGS22Q8NE09 1264 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 TIAM2Q8IVF5 1701 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 BCORQ6W2J9 1755 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 NKRFO15226 690 aaKnown RBP eCLIP16.24■□□□□ 0.19
ERCC3-202ENST00000426778 PAK1Q13153 545 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 PDXDC2PQ6P474 469 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 IQUBQ8NA54 791 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 FERMT2Q96AC1 680 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 ABCB6Q9NP58 842 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 CDC23Q9UJX2 597 aa16.24■□□□□ 0.19
ERCC3-202ENST00000426778 CCDC66A2RUB6 948 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 SCG2P13521 617 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 KLK7P49862 253 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 CAVIN4Q5BKX8 364 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 TXNRD3Q86VQ6 643 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 MINPP1Q9UNW1 487 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 MYH14Q7Z406 1995 aaKnown RBP16.23■□□□□ 0.19
ERCC3-202ENST00000426778 SRCAPQ6ZRS2 3230 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 CTAGE9A4FU28 777 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 TPM1P09493 284 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 GOLGA8HP0CJ92 632 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 LMAN1P49257 510 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 VSNL1P62760 191 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 CAPZA3Q96KX2 299 aa16.23■□□□□ 0.19
ERCC3-202ENST00000426778 DCP1AQ9NPI6 582 aaPredicted RBP16.23■□□□□ 0.19
ERCC3-202ENST00000426778 GNL3LQ9NVN8 582 aaKnown RBP16.23■□□□□ 0.19
ERCC3-202ENST00000426778 ZMYND10O75800 440 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 RPN1P04843 607 aaKnown RBP16.22■□□□□ 0.19
ERCC3-202ENST00000426778 TCP11X2Q5H9J9 407 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 CNGA4Q8IV77 575 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 SLC44A5Q8NCS7 719 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 TMEM60Q9H2L4 133 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 MCM9Q9NXL9 1143 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 USP17L3A6NCW0 530 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 USP17L4A6NCW7 530 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 STAT6P42226 847 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 USP17L1Q7RTZ2 530 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 VPS18Q9P253 973 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 TTC26A0AVF1 554 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 ARHGAP25P42331 645 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 INF2Q27J81 1249 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 LRRC15Q8TF66 581 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 HPS3Q969F9 1004 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 NSUN4Q96CB9 384 aaKnown RBP16.22■□□□□ 0.19
ERCC3-202ENST00000426778 CTAGE1Q96RT6 745 aa16.22■□□□□ 0.19
ERCC3-202ENST00000426778 JAKMIP3Q5VZ66 844 aa16.21■□□□□ 0.19
ERCC3-202ENST00000426778 SKIDA1Q1XH10 827 aa16.21■□□□□ 0.18
ERCC3-202ENST00000426778 IRF2BP1Q8IU81 584 aa16.21■□□□□ 0.18
ERCC3-202ENST00000426778 GPR101Q96P66 508 aaPredicted RBP16.21■□□□□ 0.18
ERCC3-202ENST00000426778 RBM28Q9NW13 759 aaKnown RBP16.21■□□□□ 0.18
ERCC3-202ENST00000426778 REXO2Q9Y3B8 237 aaKnown RBP16.21■□□□□ 0.18
ERCC3-202ENST00000426778 ABCA3Q99758 1704 aa16.21■□□□□ 0.18
ERCC3-202ENST00000426778 LRP5O75197 1615 aa16.2■□□□□ 0.18
ERCC3-202ENST00000426778 DUOX1Q9NRD9 1551 aa16.2■□□□□ 0.18
ERCC3-202ENST00000426778 MRPS25P82663 173 aaKnown RBP16.2■□□□□ 0.18
ERCC3-202ENST00000426778 TFAP4Q01664 338 aa16.2■□□□□ 0.18
ERCC3-202ENST00000426778 HEATR3Q7Z4Q2 680 aa16.2■□□□□ 0.18
ERCC3-202ENST00000426778 NAPGQ99747 312 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-202ENST00000426778 UBXN6Q9BZV1 441 aa16.2■□□□□ 0.18
ERCC3-202ENST00000426778 ADAM21Q9UKJ8 722 aa16.2■□□□□ 0.18
ERCC3-202ENST00000426778 ARAP2Q8WZ64 1704 aa16.2■□□□□ 0.18
ERCC3-202ENST00000426778 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
ERCC3-202ENST00000426778 PARP1P09874 1014 aaKnown RBP16.19■□□□□ 0.18
ERCC3-202ENST00000426778 DDB1Q16531 1140 aa16.19■□□□□ 0.18
ERCC3-202ENST00000426778 PARP10Q53GL7 1025 aa16.19■□□□□ 0.18
ERCC3-202ENST00000426778 BEND6Q5SZJ8 279 aaPredicted RBP16.19■□□□□ 0.18
ERCC3-202ENST00000426778 RCSD1Q6JBY9 416 aa16.19■□□□□ 0.18
ERCC3-202ENST00000426778 DUSP10Q9Y6W6 482 aa16.19■□□□□ 0.18
ERCC3-202ENST00000426778 CACNA1SQ13698 1873 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms