RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 SLF1Q9BQI6 1058 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 ESYT1Q9BSJ8 1104 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 TXNRD2Q9NNW7 524 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 IL17RBQ9NRM6 502 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 BIN2Q9UBW5 565 aaPredicted RBP17.32■□□□□ 0.36
CHD1-202ENST00000414220 PPP1R9AQ9ULJ8 1098 aa17.32■□□□□ 0.36
CHD1-202ENST00000414220 ZBED4O75132 1171 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 CTGFP29279 349 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 COPB2P35606 906 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 FLT3LGP49771 235 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 UBXN2AP68543 259 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 PRKCZQ05513 592 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 IKQ13123 557 aaPredicted RBP17.31■□□□□ 0.36
CHD1-202ENST00000414220 IRF5Q13568 498 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 PLS1Q14651 629 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 Q3C1V9 767 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 PLEKHH3Q7Z736 793 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 RALYLQ86SE5 291 aaKnown RBP17.31■□□□□ 0.36
CHD1-202ENST00000414220 DGKHQ86XP1 1220 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 GMCL1Q96IK5 515 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 UBAC1Q9BSL1 405 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 TMEM106CQ9BVX2 250 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 IL25Q9H293 177 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
CHD1-202ENST00000414220 B4E1Z4 1266 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 NMT2O60551 498 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 KDM4AO75164 1064 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 SLC25A27O95847 323 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 GRK4P32298 578 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 PTH1RQ03431 593 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 RNF20Q5VTR2 975 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 FAM160B2Q86V87 743 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 SKAP1Q86WV1 359 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 PXYLP1Q8TE99 480 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 DCAF4Q8WV16 495 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 ARMC5Q96C12 935 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 ATG4CQ96DT6 458 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 SPATC1LQ9H0A9 340 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 MROH8Q9H579 483 aa17.3■□□□□ 0.36
CHD1-202ENST00000414220 NEDD4P46934 1319 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 ERICH2A1L162 156 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 STRNO43815 780 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 MCCP23508 829 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 NOVP48745 357 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 STAT2P52630 851 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 CAP1Q01518 475 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 SART3Q15020 963 aaKnown RBP17.29■□□□□ 0.36
CHD1-202ENST00000414220 RCSD1Q6JBY9 416 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 GPR142Q7Z601 462 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 TRMT44Q8IYL2 757 aaKnown RBP17.29■□□□□ 0.36
CHD1-202ENST00000414220 SHCBP1Q8NEM2 672 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 NCOA7Q8NI08 942 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 NUP88Q99567 741 aaPredicted RBP17.29■□□□□ 0.36
CHD1-202ENST00000414220 TMEM47Q9BQJ4 181 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 NBPF3Q9H094 633 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 SLC5A4Q9NY91 659 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 BTBD7Q9P203 1132 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 RBM8AQ9Y5S9 174 aaKnown RBP17.29■□□□□ 0.36
CHD1-202ENST00000414220 TACC3Q9Y6A5 838 aa17.29■□□□□ 0.36
CHD1-202ENST00000414220 TMEM232C9JQI7 657 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 VWA5AO00534 786 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 ADCY3O60266 1144 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 CNMDO75829 334 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 CYP21A2P08686 494 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 STAT3P40763 770 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 RGS2P41220 211 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 CCDC96Q2M329 555 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 NCAPG2Q86XI2 1143 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 KIFC2Q96AC6 838 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 ZSCAN10Q96SZ4 725 aaPredicted RBP17.28■□□□□ 0.36
CHD1-202ENST00000414220 MOV10L1Q9BXT6 1211 aaKnown RBP17.28■□□□□ 0.36
CHD1-202ENST00000414220 PORCNQ9H237 461 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 KAT14Q9H8E8 782 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 FBXO28Q9NVF7 368 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 ZSWIM5Q9P217 1185 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 GABRQQ9UN88 632 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 ADAMTS5Q9UNA0 930 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 MTMR7Q9Y216 660 aa17.28■□□□□ 0.36
CHD1-202ENST00000414220 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.36
CHD1-202ENST00000414220 PLA2G6O60733 806 aa17.27■□□□□ 0.36
CHD1-202ENST00000414220 ZKSCAN3Q9BRR0 538 aa17.27■□□□□ 0.36
CHD1-202ENST00000414220 SLC15A5A6NIM6 579 aa17.26■□□□□ 0.35
CHD1-202ENST00000414220 PEX10O60683 326 aa17.26■□□□□ 0.35
CHD1-202ENST00000414220 XRCC5P13010 732 aaKnown RBP17.26■□□□□ 0.35
CHD1-202ENST00000414220 CYP2B6P20813 491 aa17.26■□□□□ 0.35
CHD1-202ENST00000414220 PTPREP23469 700 aa17.26■□□□□ 0.35
CHD1-202ENST00000414220 SH3TC2Q8TF17 1288 aa17.26■□□□□ 0.35
CHD1-202ENST00000414220 TEX13BQ9BXU2 312 aa17.26■□□□□ 0.35
CHD1-202ENST00000414220 LSG1Q9H089 658 aaKnown RBP17.26■□□□□ 0.35
CHD1-202ENST00000414220 GJD2Q9UKL4 321 aa17.26■□□□□ 0.35
CHD1-202ENST00000414220 E7EWF7 191 aa17.25■□□□□ 0.35
CHD1-202ENST00000414220 ERCC3P19447 782 aa17.25■□□□□ 0.35
CHD1-202ENST00000414220 OAZ1P54368 228 aa17.25■□□□□ 0.35
CHD1-202ENST00000414220 TMEM132BQ14DG7 1078 aa17.25■□□□□ 0.35
CHD1-202ENST00000414220 IFIT1BQ5T764 474 aaKnown RBP17.25■□□□□ 0.35
CHD1-202ENST00000414220 DPP9Q86TI2 863 aa17.25■□□□□ 0.35
CHD1-202ENST00000414220 RIOX2Q8IUF8 465 aa17.25■□□□□ 0.35
CHD1-202ENST00000414220 ANKS1AQ92625 1134 aa17.25■□□□□ 0.35
CHD1-202ENST00000414220 ZNF333Q96JL9 665 aa17.25■□□□□ 0.35
CHD1-202ENST00000414220 PNMA2Q9UL42 364 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms