RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 SYNE3Q6ZMZ3 975 aa21.62■■□□□ 1.05
CIRBP-202ENST00000413636 SPICE1Q8N0Z3 855 aa21.62■■□□□ 1.05
CIRBP-202ENST00000413636 GMCL1P1Q8NEA9 526 aa21.62■■□□□ 1.05
CIRBP-202ENST00000413636 NUP133Q8WUM0 1156 aa21.62■■□□□ 1.05
CIRBP-202ENST00000413636 ATP6V1DQ9Y5K8 247 aa21.62■■□□□ 1.05
CIRBP-202ENST00000413636 NDUFB10O96000 172 aa21.61■■□□□ 1.05
CIRBP-202ENST00000413636 SLC10A3P09131 477 aa21.61■■□□□ 1.05
CIRBP-202ENST00000413636 ZBTB48P10074 688 aaPredicted RBP21.61■■□□□ 1.05
CIRBP-202ENST00000413636 RXRAP19793 462 aa21.61■■□□□ 1.05
CIRBP-202ENST00000413636 TROAPQ12815 778 aa21.61■■□□□ 1.05
CIRBP-202ENST00000413636 SLFN13Q68D06 897 aa21.61■■□□□ 1.05
CIRBP-202ENST00000413636 USP17L2Q6R6M4 530 aa21.61■■□□□ 1.05
CIRBP-202ENST00000413636 PAXIP1Q6ZW49 1069 aaPredicted RBP21.61■■□□□ 1.05
CIRBP-202ENST00000413636 MICU3Q86XE3 530 aa21.61■■□□□ 1.05
CIRBP-202ENST00000413636 EMILIN3Q9NT22 766 aa21.61■■□□□ 1.05
CIRBP-202ENST00000413636 KIF3AQ9Y496 699 aa21.61■■□□□ 1.05
CIRBP-202ENST00000413636 DHX16O60231 1041 aaKnown RBP21.6■■□□□ 1.05
CIRBP-202ENST00000413636 DDAH1O94760 285 aa21.6■■□□□ 1.05
CIRBP-202ENST00000413636 ZSCAN22P10073 491 aaPredicted RBP21.6■■□□□ 1.05
CIRBP-202ENST00000413636 PDIA3P30101 505 aaKnown RBP21.6■■□□□ 1.05
CIRBP-202ENST00000413636 SH3D19Q5HYK7 790 aa21.6■■□□□ 1.05
CIRBP-202ENST00000413636 A0A0G2JLL6 359 aaPredicted RBP21.59■■□□□ 1.05
CIRBP-202ENST00000413636 GOLGA8BA8MQT2 603 aa21.59■■□□□ 1.05
CIRBP-202ENST00000413636 ZBTB43O43298 467 aa21.59■■□□□ 1.05
CIRBP-202ENST00000413636 PDHBP11177 359 aa21.59■■□□□ 1.05
CIRBP-202ENST00000413636 HMGN5P82970 282 aaKnown RBP21.59■■□□□ 1.05
CIRBP-202ENST00000413636 SCRN1Q12765 414 aa21.59■■□□□ 1.05
CIRBP-202ENST00000413636 SNAPC2Q13487 334 aa21.59■■□□□ 1.05
CIRBP-202ENST00000413636 PRRT2Q7Z6L0 340 aaPredicted RBP21.59■■□□□ 1.05
CIRBP-202ENST00000413636 CCDC144CPQ8IYA2 1237 aa21.59■■□□□ 1.05
CIRBP-202ENST00000413636 CCDC102AQ96A19 550 aa21.59■■□□□ 1.05
CIRBP-202ENST00000413636 TMOD4Q9NZQ9 345 aa21.59■■□□□ 1.05
CIRBP-202ENST00000413636 LOC285556D6RIA3 1793 aa21.59■■□□□ 1.05
CIRBP-202ENST00000413636 RASSF10A6NK89 507 aa21.58■■□□□ 1.05
CIRBP-202ENST00000413636 FAM155AB1AL88 458 aaPredicted RBP21.58■■□□□ 1.05
CIRBP-202ENST00000413636 HTRA3P83110 453 aa21.58■■□□□ 1.05
CIRBP-202ENST00000413636 GRM1Q13255 1194 aa21.58■■□□□ 1.05
CIRBP-202ENST00000413636 DEFB115Q30KQ5 88 aa21.58■■□□□ 1.05
CIRBP-202ENST00000413636 LARP1BQ659C4 914 aaKnown RBP21.58■■□□□ 1.05
CIRBP-202ENST00000413636 CYP4F22Q6NT55 531 aa21.58■■□□□ 1.05
CIRBP-202ENST00000413636 NUP88Q99567 741 aaPredicted RBP21.58■■□□□ 1.05
CIRBP-202ENST00000413636 HPS5Q9UPZ3 1129 aa21.58■■□□□ 1.05
CIRBP-202ENST00000413636 CALM1P0DP23 149 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 CALM2P0DP24 149 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 CALM3P0DP25 149 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 SNHG28P0DPA3 235 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 SLC1A4P43007 532 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 GTF2A2P52657 109 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 C1QTNF8P60827 252 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 GADL1Q6ZQY3 521 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 SMARCC2Q8TAQ2 1214 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 LPAR1Q92633 364 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 GMCL1Q96IK5 515 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 MS4A4AQ96JQ5 239 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 C12orf42Q96LP6 360 aa21.58■■□□□ 1.04
CIRBP-202ENST00000413636 ISY1Q9ULR0 285 aaKnown RBP21.58■■□□□ 1.04
CIRBP-202ENST00000413636 FRMPD2Q68DX3 1309 aaPredicted RBP21.57■■□□□ 1.04
CIRBP-202ENST00000413636 GOLGA8AA7E2F4 631 aa21.57■■□□□ 1.04
CIRBP-202ENST00000413636 VCAM1P19320 739 aa21.57■■□□□ 1.04
CIRBP-202ENST00000413636 GRM4Q14833 912 aa21.57■■□□□ 1.04
CIRBP-202ENST00000413636 CCDC96Q2M329 555 aa21.57■■□□□ 1.04
CIRBP-202ENST00000413636 FAM83BQ5T0W9 1011 aa21.57■■□□□ 1.04
CIRBP-202ENST00000413636 DCAF4Q8WV16 495 aa21.57■■□□□ 1.04
CIRBP-202ENST00000413636 TRAK2O60296 914 aa21.56■■□□□ 1.04
CIRBP-202ENST00000413636 GOLGA8HP0CJ92 632 aa21.56■■□□□ 1.04
CIRBP-202ENST00000413636 CETPP11597 493 aa21.56■■□□□ 1.04
CIRBP-202ENST00000413636 BMP3P12645 472 aa21.56■■□□□ 1.04
CIRBP-202ENST00000413636 METAP2P50579 478 aaKnown RBP eCLIP21.56■■□□□ 1.04
CIRBP-202ENST00000413636 RCAN1P53805 252 aa21.56■■□□□ 1.04
CIRBP-202ENST00000413636 CCT2P78371 535 aaKnown RBP21.56■■□□□ 1.04
CIRBP-202ENST00000413636 MOGSQ13724 837 aa21.56■■□□□ 1.04
CIRBP-202ENST00000413636 MCTP1Q6DN14 999 aa21.56■■□□□ 1.04
CIRBP-202ENST00000413636 KCTD1Q719H9 257 aa21.56■■□□□ 1.04
CIRBP-202ENST00000413636 FANCBQ8NB91 859 aa21.56■■□□□ 1.04
CIRBP-202ENST00000413636 CTCFLQ8NI51 663 aaPredicted RBP21.56■■□□□ 1.04
CIRBP-202ENST00000413636 WDR46O15213 610 aaKnown RBP21.55■■□□□ 1.04
CIRBP-202ENST00000413636 PARP1P09874 1014 aaKnown RBP21.55■■□□□ 1.04
CIRBP-202ENST00000413636 ZNF543Q08ER8 600 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 STAG2Q8N3U4 1231 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 PROCA1Q8NCQ7 364 aaPredicted RBP21.55■■□□□ 1.04
CIRBP-202ENST00000413636 MAP3K14Q99558 947 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 GPCPD1Q9NPB8 672 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 MAD2L2Q9UI95 211 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 CCL15-CCL14A0A0B4J2E2 113 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 F13A1P00488 732 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 CCL15Q16663 113 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 RTN1Q16799 776 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 TREML2Q5T2D2 321 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 FASTKD5Q7L8L6 764 aaKnown RBP21.55■■□□□ 1.04
CIRBP-202ENST00000413636 FAM184AQ8NB25 1140 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 BRI3BPQ8WY22 251 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 CAPNS2Q96L46 248 aa21.55■■□□□ 1.04
CIRBP-202ENST00000413636 RPAP3Q9H6T3 665 aaPredicted RBP21.55■■□□□ 1.04
CIRBP-202ENST00000413636 NCOA5Q9HCD5 579 aaKnown RBP21.55■■□□□ 1.04
CIRBP-202ENST00000413636 TCHHQ07283 1943 aa21.54■■□□□ 1.04
CIRBP-202ENST00000413636 CDC27P30260 824 aa21.54■■□□□ 1.04
CIRBP-202ENST00000413636 KIF5BP33176 963 aa21.54■■□□□ 1.04
CIRBP-202ENST00000413636 ASPRV1Q53RT3 343 aa21.54■■□□□ 1.04
CIRBP-202ENST00000413636 GPATCH4Q5T3I0 446 aaKnown RBP21.54■■□□□ 1.04
CIRBP-202ENST00000413636 FAM217BQ9NTX9 383 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms