RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PDCLQ13371 301 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 CCDC152Q4G0S7 254 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 XAGE2Q96GT9 111 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 TNNI2P48788 182 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 ST5P78524 1137 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 KIF23Q02241 960 aaPredicted RBP19.51■□□□□ 0.71
SMPD4-202ENST00000409031 BICD1Q96G01 975 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.51■□□□□ 0.71
SMPD4-202ENST00000409031 ERVK-7P63135 1459 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 EVI5O60447 810 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 FAM13AO94988 1023 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 KRT15P19012 456 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 GJC1P36383 396 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 SAMSN1Q9NSI8 373 aaKnown RBP19.51■□□□□ 0.71
SMPD4-202ENST00000409031 CCZ1BP86790 482 aa19.5■□□□□ 0.71
SMPD4-202ENST00000409031 CCZ1P86791 482 aaPredicted RBP19.5■□□□□ 0.71
SMPD4-202ENST00000409031 MFAP3LO75121 409 aa19.5■□□□□ 0.71
SMPD4-202ENST00000409031 EPC1Q9H2F5 836 aa19.5■□□□□ 0.71
SMPD4-202ENST00000409031 CTTNBP2NLQ9P2B4 639 aa19.5■□□□□ 0.71
SMPD4-202ENST00000409031 RBM5P52756 815 aaKnown RBP eCLIP19.5■□□□□ 0.71
SMPD4-202ENST00000409031 C2orf54Q08AI8 447 aa19.5■□□□□ 0.71
SMPD4-202ENST00000409031 E4F1Q66K89 784 aaPredicted RBP19.5■□□□□ 0.71
SMPD4-202ENST00000409031 NAP1L4Q99733 375 aaKnown RBP19.5■□□□□ 0.71
SMPD4-202ENST00000409031 GNA14O95837 355 aa19.5■□□□□ 0.71
SMPD4-202ENST00000409031 GAS8O95995 478 aa19.5■□□□□ 0.71
SMPD4-202ENST00000409031 IRX4P78413 519 aa19.5■□□□□ 0.71
SMPD4-202ENST00000409031 RPUSD2Q8IZ73 545 aaKnown RBP19.5■□□□□ 0.71
SMPD4-202ENST00000409031 YY1AP1Q9H869 796 aa19.5■□□□□ 0.71
SMPD4-202ENST00000409031 KIAA0556O60303 1618 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 BRD2P25440 801 aaKnown RBP19.49■□□□□ 0.71
SMPD4-202ENST00000409031 GGCXP38435 758 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 TAF11Q15544 211 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 DPH5Q9H2P9 285 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 GSTO1P78417 241 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 PPP4R3AQ6IN85 833 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 TOGARAM2Q6ZUX3 1019 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 VPS54Q9P1Q0 977 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 RPN1P04843 607 aaKnown RBP19.49■□□□□ 0.71
SMPD4-202ENST00000409031 HOXC9P31274 260 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 EIF4A1P60842 406 aaKnown RBP19.49■□□□□ 0.71
SMPD4-202ENST00000409031 INF2Q27J81 1249 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 CABP7Q86V35 215 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 ARMC2Q8NEN0 867 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 RUNDC3BQ96NL0 473 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 TUBGCP2Q9BSJ2 902 aa19.49■□□□□ 0.71
SMPD4-202ENST00000409031 TXNDC9O14530 226 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 ANKRD13CQ8N6S4 541 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 PLBD2Q8NHP8 589 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 LRRC23Q53EV4 343 aaPredicted RBP19.48■□□□□ 0.71
SMPD4-202ENST00000409031 GPIHBP1Q8IV16 184 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 MAIP1Q8WWC4 291 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 CASQ2O14958 399 aaPredicted RBP19.48■□□□□ 0.71
SMPD4-202ENST00000409031 EHHADHQ08426 723 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 ARMCX5Q6P1M9 558 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 GEMIN8Q9NWZ8 242 aaKnown RBP19.48■□□□□ 0.71
SMPD4-202ENST00000409031 IQSEC3Q9UPP2 1182 aaPredicted RBP19.48■□□□□ 0.71
SMPD4-202ENST00000409031 TRAF1Q13077 416 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 PI4K2BQ8TCG2 481 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 ANKIB1Q9P2G1 1089 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 FRMD4BQ9Y2L6 1034 aa19.48■□□□□ 0.71
SMPD4-202ENST00000409031 SEMA3EO15041 775 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 GLE1Q53GS7 698 aaKnown RBP19.47■□□□□ 0.71
SMPD4-202ENST00000409031 AKNAD1Q5T1N1 836 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 P3H4Q92791 437 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 SLC24A3Q9HC58 644 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 LRWD1Q9UFC0 647 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 SEPT14Q6ZU15 432 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 FMR1NBQ8N0W7 255 aaPredicted RBP19.47■□□□□ 0.71
SMPD4-202ENST00000409031 PAF1Q8N7H5 531 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 NFATC2IPQ8NCF5 419 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 VIPAS39Q9H9C1 493 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 PARP1P09874 1014 aaKnown RBP19.47■□□□□ 0.71
SMPD4-202ENST00000409031 TSC22D3Q99576 134 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 FOXP1Q9H334 677 aaPredicted RBP19.47■□□□□ 0.71
SMPD4-202ENST00000409031 SCOCQ9UIL1 159 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 IQCB1Q15051 598 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 CFAP157Q5JU67 520 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 GBP7Q8N8V2 638 aaPredicted RBP19.47■□□□□ 0.71
SMPD4-202ENST00000409031 COG1Q8WTW3 980 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 DNAI2Q9GZS0 605 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 EIF4G3O43432 1585 aaKnown RBP19.47■□□□□ 0.71
SMPD4-202ENST00000409031 MAGI3Q5TCQ9 1506 aa19.47■□□□□ 0.71
SMPD4-202ENST00000409031 PFDN1O60925 122 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 ZBED6P86452 979 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 SLC4A8Q2Y0W8 1093 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 MAP7D1Q3KQU3 841 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 NYAP1Q6ZVC0 841 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 KRT25Q7Z3Z0 450 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 SUFUQ9UMX1 484 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 ANO9A1A5B4 782 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 CALUO43852 315 aaPredicted RBP19.46■□□□□ 0.71
SMPD4-202ENST00000409031 IFNAR2P48551 515 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 DHX40Q8IX18 779 aaKnown RBP19.46■□□□□ 0.71
SMPD4-202ENST00000409031 CEP120Q8N960 986 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 USH1CQ9Y6N9 552 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 PRDM15P57071 1507 aaPredicted RBP19.46■□□□□ 0.71
SMPD4-202ENST00000409031 ZNF654Q8IZM8 581 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 SYMPKQ92797 1274 aaKnown RBP19.46■□□□□ 0.71
SMPD4-202ENST00000409031 FGAP02671 866 aa19.46■□□□□ 0.71
SMPD4-202ENST00000409031 NONOQ15233 471 aaKnown RBP eCLIP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms