RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 TMEM132BQ14DG7 1078 aa23.3■■□□□ 1.32
HDAC11-205ENST00000404548 GIMAP6Q6P9H5 292 aa23.3■■□□□ 1.32
HDAC11-205ENST00000404548 PUS7LQ9H0K6 701 aaKnown RBP23.3■■□□□ 1.32
HDAC11-205ENST00000404548 KBTBD13C9JR72 458 aa23.29■■□□□ 1.32
HDAC11-205ENST00000404548 SMIM22K7EJ46 135 aa23.29■■□□□ 1.32
HDAC11-205ENST00000404548 SNX17Q15036 470 aa23.29■■□□□ 1.32
HDAC11-205ENST00000404548 SBK1Q52WX2 424 aa23.29■■□□□ 1.32
HDAC11-205ENST00000404548 RIOX2Q8IUF8 465 aa23.29■■□□□ 1.32
HDAC11-205ENST00000404548 LBHD1Q9BQE6 289 aaPredicted RBP23.29■■□□□ 1.32
HDAC11-205ENST00000404548 ECHDC1Q9NTX5 307 aa23.29■■□□□ 1.32
HDAC11-205ENST00000404548 DIS3Q9Y2L1 958 aaKnown RBP23.29■■□□□ 1.32
HDAC11-205ENST00000404548 UNC80Q8N2C7 3258 aa23.29■■□□□ 1.32
HDAC11-205ENST00000404548 GREB1LQ9C091 1923 aaPredicted RBP23.28■■□□□ 1.32
HDAC11-205ENST00000404548 CHGBP05060 677 aa23.28■■□□□ 1.32
HDAC11-205ENST00000404548 RTP1P59025 263 aa23.28■■□□□ 1.32
HDAC11-205ENST00000404548 MDM2Q00987 491 aaPredicted RBP23.28■■□□□ 1.32
HDAC11-205ENST00000404548 C1orf53Q5VUE5 145 aa23.28■■□□□ 1.32
HDAC11-205ENST00000404548 SLC17A8Q8NDX2 589 aa23.28■■□□□ 1.32
HDAC11-205ENST00000404548 BCL11AQ9H165 835 aa23.28■■□□□ 1.32
HDAC11-205ENST00000404548 PRKAG2Q9UGJ0 569 aa23.28■■□□□ 1.32
HDAC11-205ENST00000404548 PPP1R9AQ9ULJ8 1098 aa23.28■■□□□ 1.32
HDAC11-205ENST00000404548 STXBP5LQ9Y2K9 1186 aa23.28■■□□□ 1.32
HDAC11-205ENST00000404548 VWA5AO00534 786 aa23.27■■□□□ 1.32
HDAC11-205ENST00000404548 ATN1P54259 1190 aaPredicted RBP23.27■■□□□ 1.32
HDAC11-205ENST00000404548 GJC2Q5T442 439 aaPredicted RBP23.27■■□□□ 1.32
HDAC11-205ENST00000404548 STRBPQ96SI9 672 aaKnown RBP23.27■■□□□ 1.32
HDAC11-205ENST00000404548 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.27■■□□□ 1.32
HDAC11-205ENST00000404548 MTMR10Q9NXD2 777 aa23.27■■□□□ 1.32
HDAC11-205ENST00000404548 ZNF214Q9UL59 606 aaPredicted RBP23.27■■□□□ 1.32
HDAC11-205ENST00000404548 FAM109BQ6ICB4 259 aaPredicted RBP23.26■■□□□ 1.31
HDAC11-205ENST00000404548 SLC39A5Q6ZMH5 540 aa23.26■■□□□ 1.31
HDAC11-205ENST00000404548 KBTBD3Q8NAB2 608 aa23.26■■□□□ 1.31
HDAC11-205ENST00000404548 REPS2Q8NFH8 660 aa23.26■■□□□ 1.31
HDAC11-205ENST00000404548 FBXO28Q9NVF7 368 aa23.26■■□□□ 1.31
HDAC11-205ENST00000404548 STAT3P40763 770 aa23.25■■□□□ 1.31
HDAC11-205ENST00000404548 KCTD2Q14681 263 aa23.25■■□□□ 1.31
HDAC11-205ENST00000404548 GPATCH3Q96I76 525 aa23.25■■□□□ 1.31
HDAC11-205ENST00000404548 MMP19Q99542 508 aa23.25■■□□□ 1.31
HDAC11-205ENST00000404548 LTBP2Q14767 1821 aa23.24■■□□□ 1.31
HDAC11-205ENST00000404548 GSG1L2A8MUP6 293 aa23.24■■□□□ 1.31
HDAC11-205ENST00000404548 ZFYP08048 801 aaPredicted RBP23.24■■□□□ 1.31
HDAC11-205ENST00000404548 LRRC41Q15345 812 aa23.24■■□□□ 1.31
HDAC11-205ENST00000404548 ZNF792Q3KQV3 632 aa23.24■■□□□ 1.31
HDAC11-205ENST00000404548 Q7L0L9 218 aa23.24■■□□□ 1.31
HDAC11-205ENST00000404548 APPBP2Q92624 585 aa23.24■■□□□ 1.31
HDAC11-205ENST00000404548 TINF2Q9BSI4 451 aa23.24■■□□□ 1.31
HDAC11-205ENST00000404548 NYAP2Q9P242 653 aa23.24■■□□□ 1.31
HDAC11-205ENST00000404548 SYNPO2Q9UMS6 1093 aa23.24■■□□□ 1.31
HDAC11-205ENST00000404548 SMARCA5O60264 1052 aaPredicted RBP23.23■■□□□ 1.31
HDAC11-205ENST00000404548 RASA1P20936 1047 aa23.23■■□□□ 1.31
HDAC11-205ENST00000404548 FAM47AQ5JRC9 791 aa23.23■■□□□ 1.31
HDAC11-205ENST00000404548 FAM83BQ5T0W9 1011 aa23.23■■□□□ 1.31
HDAC11-205ENST00000404548 C20orf194Q5TEA3 1177 aa23.23■■□□□ 1.31
HDAC11-205ENST00000404548 MSL3Q8N5Y2 521 aaKnown RBP23.23■■□□□ 1.31
HDAC11-205ENST00000404548 DCTPP1Q9H773 170 aa23.23■■□□□ 1.31
HDAC11-205ENST00000404548 ATP11BQ9Y2G3 1177 aa23.23■■□□□ 1.31
HDAC11-205ENST00000404548 COL11A1P12107 1806 aaPredicted RBP23.23■■□□□ 1.31
HDAC11-205ENST00000404548 POTEB2H3BUK9 544 aa23.22■■□□□ 1.31
HDAC11-205ENST00000404548 RARBP10826 455 aa23.22■■□□□ 1.31
HDAC11-205ENST00000404548 GNAT2P19087 354 aa23.22■■□□□ 1.31
HDAC11-205ENST00000404548 PRAMEF19Q5SWL8 479 aa23.22■■□□□ 1.31
HDAC11-205ENST00000404548 ANO1Q5XXA6 986 aa23.22■■□□□ 1.31
HDAC11-205ENST00000404548 SLF1Q9BQI6 1058 aa23.22■■□□□ 1.31
HDAC11-205ENST00000404548 TEX13BQ9BXU2 312 aa23.22■■□□□ 1.31
HDAC11-205ENST00000404548 ZNF287Q9HBT7 754 aa23.22■■□□□ 1.31
HDAC11-205ENST00000404548 PHF24Q9UPV7 400 aa23.22■■□□□ 1.31
HDAC11-205ENST00000404548 ATP2A1O14983 1001 aa23.21■■□□□ 1.31
HDAC11-205ENST00000404548 SAMD1Q6SPF0 538 aaPredicted RBP23.21■■□□□ 1.31
HDAC11-205ENST00000404548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.21■■□□□ 1.31
HDAC11-205ENST00000404548 OSBP2Q969R2 916 aa23.21■■□□□ 1.31
HDAC11-205ENST00000404548 MKNK2Q9HBH9 465 aa23.21■■□□□ 1.31
HDAC11-205ENST00000404548 XPNPEP3Q9NQH7 507 aa23.21■■□□□ 1.31
HDAC11-205ENST00000404548 IGKV6D-41A0A0C4DH26 115 aa23.2■■□□□ 1.3
HDAC11-205ENST00000404548 RNF113AO15541 343 aaKnown RBP23.2■■□□□ 1.3
HDAC11-205ENST00000404548 PGK2P07205 417 aa23.2■■□□□ 1.3
HDAC11-205ENST00000404548 ADCYAP1R1P41586 468 aa23.2■■□□□ 1.3
HDAC11-205ENST00000404548 RNF180Q86T96 592 aa23.2■■□□□ 1.3
HDAC11-205ENST00000404548 PDLIM7Q9NR12 457 aa23.2■■□□□ 1.3
HDAC11-205ENST00000404548 ZNFX1Q9P2E3 1918 aaKnown RBP23.2■■□□□ 1.3
HDAC11-205ENST00000404548 SYNGAP1Q96PV0 1343 aa23.19■■□□□ 1.3
HDAC11-205ENST00000404548 F5H6K3 240 aa23.19■■□□□ 1.3
HDAC11-205ENST00000404548 KLRC3Q07444 240 aa23.19■■□□□ 1.3
HDAC11-205ENST00000404548 LRRFIP1Q32MZ4 808 aaKnown RBP23.19■■□□□ 1.3
HDAC11-205ENST00000404548 TRIM60Q495X7 471 aa23.19■■□□□ 1.3
HDAC11-205ENST00000404548 PRPF38AQ8NAV1 312 aaKnown RBP23.19■■□□□ 1.3
HDAC11-205ENST00000404548 EPB41L4AQ9HCS5 686 aaPredicted RBP23.19■■□□□ 1.3
HDAC11-205ENST00000404548 PLXNA1Q9UIW2 1896 aa23.18■■□□□ 1.3
HDAC11-205ENST00000404548 CDH23Q9H251 3354 aa23.18■■□□□ 1.3
HDAC11-205ENST00000404548 GPAA1O43292 621 aa23.18■■□□□ 1.3
HDAC11-205ENST00000404548 NDUFB10O96000 172 aa23.18■■□□□ 1.3
HDAC11-205ENST00000404548 ZNF865P0CJ78 1059 aaPredicted RBP23.18■■□□□ 1.3
HDAC11-205ENST00000404548 AKR1A1P14550 325 aa23.18■■□□□ 1.3
HDAC11-205ENST00000404548 MKL1Q969V6 931 aa23.18■■□□□ 1.3
HDAC11-205ENST00000404548 CNPY2Q9Y2B0 182 aa23.18■■□□□ 1.3
HDAC11-205ENST00000404548 EYSQ5T1H1 3165 aa23.17■■□□□ 1.3
HDAC11-205ENST00000404548 PLIN4Q96Q06 1357 aa23.17■■□□□ 1.3
HDAC11-205ENST00000404548 DNAJC25-GNG10A0A024R161 153 aa23.17■■□□□ 1.3
HDAC11-205ENST00000404548 DLL1O00548 723 aa23.17■■□□□ 1.3
HDAC11-205ENST00000404548 RAD21O60216 631 aa23.17■■□□□ 1.3
HDAC11-205ENST00000404548 MAMDC4Q6UXC1 1216 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms