RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SPRED2Q7Z698 418 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 THNSL2Q86YJ6 484 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 PI4K2BQ8TCG2 481 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 WDR89Q96FK6 387 aaPredicted RBP6.32□□□□□ -1.4
GABPB1-204ENST00000396464 EAF1Q96JC9 268 aaPredicted RBP6.32□□□□□ -1.4
GABPB1-204ENST00000396464 INO80BQ9C086 356 aaPredicted RBP6.32□□□□□ -1.4
GABPB1-204ENST00000396464 ZNF700Q9H0M5 742 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 TMEM39AQ9NV64 488 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 FAM8A1Q9UBU6 413 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 VAV3Q9UKW4 847 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 PCOLCE2Q9UKZ9 415 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 INTUQ9ULD6 942 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 SCINQ9Y6U3 715 aa6.32□□□□□ -1.4
GABPB1-204ENST00000396464 GIPC1O14908 333 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 PDPK1O15530 556 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 PAPLNO95428 1278 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 ASMTLO95671 621 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 PMLP29590 882 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 JAG1P78504 1218 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 RAPGEF1Q13905 1077 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 RASGRF1Q13972 1273 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 GRM2Q14416 872 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 TTLL4Q14679 1199 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 IFI16Q16666 785 aaKnown RBP6.31□□□□□ -1.4
GABPB1-204ENST00000396464 DDR2Q16832 855 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 MYO1HQ8N1T3 1032 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 CHAC2Q8WUX2 184 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 CPLX3Q8WVH0 158 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 HRASLS5Q96KN8 279 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.31□□□□□ -1.4
GABPB1-204ENST00000396464 PLAAQ9Y263 795 aa6.31□□□□□ -1.4
GABPB1-204ENST00000396464 TMEM265A0A087WTH1 108 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 F6X3S4 739 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 CD8BP10966 210 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 FUT4P22083 530 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 STAT3P40763 770 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 PRKCQQ04759 706 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 FAAP100Q0VG06 881 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 HLTFQ14527 1009 aaKnown RBP eCLIP6.3□□□□□ -1.4
GABPB1-204ENST00000396464 AOC3Q16853 763 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 KIF4BQ2VIQ3 1234 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 EFCAB2Q5VUJ9 269 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 ATG4DQ86TL0 474 aaPredicted RBP6.3□□□□□ -1.4
GABPB1-204ENST00000396464 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.3□□□□□ -1.4
GABPB1-204ENST00000396464 PAF1Q8N7H5 531 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 ACSBG1Q96GR2 724 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 PAGR1Q9BTK6 254 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 PICK1Q9NRD5 415 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 DISC1Q9NRI5 854 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 PTCH2Q9Y6C5 1203 aa6.3□□□□□ -1.4
GABPB1-204ENST00000396464 NPHP1O15259 732 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 ZNF862O60290 1169 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 HSP90AA1P07900 732 aaKnown RBP6.29□□□□□ -1.4
GABPB1-204ENST00000396464 MAN1A1P33908 653 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 MYBPC2Q14324 1141 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 TNNI3KQ59H18 835 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 ZNF648Q5T619 568 aaPredicted RBP6.29□□□□□ -1.4
GABPB1-204ENST00000396464 KSR2Q6VAB6 950 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 TTC8Q8TAM2 541 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 EPS8L3Q8TE67 593 aaKnown RBP6.29□□□□□ -1.4
GABPB1-204ENST00000396464 THAP3Q8WTV1 239 aaPredicted RBP6.29□□□□□ -1.4
GABPB1-204ENST00000396464 FAM168AQ92567 244 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 SHDQ96IW2 340 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 ST7Q9NRC1 585 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 ANAPC4Q9UJX5 808 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 MAPK8IP1Q9UQF2 711 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 LZTS1Q9Y250 596 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 AKAP2Q9Y2D5 859 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 WASHC2CQ9Y4E1 1318 aa6.29□□□□□ -1.4
GABPB1-204ENST00000396464 TBX3O15119 743 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 FARP2O94887 1054 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-204ENST00000396464 RASGRP1O95267 797 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 ITIH2P19823 946 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 EIF4A3P38919 411 aaKnown RBP6.28□□□□□ -1.4
GABPB1-204ENST00000396464 RAB27AP51159 221 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 COL9A2Q14055 689 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-204ENST00000396464 MAPRE1Q15691 268 aaKnown RBP6.28□□□□□ -1.4
GABPB1-204ENST00000396464 C21orf62-AS1Q17RA5 79 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 TMEM95Q3KNT9 176 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 TM4SF20Q53R12 229 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 INO80DQ53TQ3 878 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-204ENST00000396464 AXDND1Q5T1B0 1012 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-204ENST00000396464 ANGEL2Q5VTE6 544 aaKnown RBP6.28□□□□□ -1.4
GABPB1-204ENST00000396464 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-204ENST00000396464 KSR1Q8IVT5 923 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 SULF2Q8IWU5 870 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 TOP6BLQ8N6T0 577 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 FAM169BQ8N8A8 192 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 SLC38A3Q99624 504 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 RSRP1Q9BUV0 290 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 DUSP23Q9BVJ7 150 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 SRRTQ9BXP5 876 aaKnown RBP6.28□□□□□ -1.4
GABPB1-204ENST00000396464 EMILIN2Q9BXX0 1053 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 MKNK2Q9HBH9 465 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 CBX8Q9HC52 389 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 ZIM2Q9NZV7 527 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 MCM8Q9UJA3 840 aa6.28□□□□□ -1.4
GABPB1-204ENST00000396464 MINDY4BA8MYZ0 360 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 LEFTY1O75610 366 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms