RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 DYMQ7RTS9 669 aa18.83■□□□□ 0.61
SIPA1-201ENST00000394224 TMC4Q7Z404 712 aa18.83■□□□□ 0.61
SIPA1-201ENST00000394224 XDHP47989 1333 aa18.83■□□□□ 0.61
SIPA1-201ENST00000394224 MYO1BO43795 1136 aa18.83■□□□□ 0.61
SIPA1-201ENST00000394224 IQUBQ8NA54 791 aa18.83■□□□□ 0.6
SIPA1-201ENST00000394224 MTRQ99707 1265 aa18.83■□□□□ 0.6
SIPA1-201ENST00000394224 MMRN2Q9H8L6 949 aa18.83■□□□□ 0.6
SIPA1-201ENST00000394224 MAGEC2Q9UBF1 373 aaPredicted RBP18.83■□□□□ 0.6
SIPA1-201ENST00000394224 TCRBV5S4A2TA0A5A2 114 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 GGCXP38435 758 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 IGHMBP2P38935 993 aaKnown RBP18.82■□□□□ 0.6
SIPA1-201ENST00000394224 UBA7P41226 1012 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 CCT5P48643 541 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 SND1Q7KZF4 910 aaKnown RBP eCLIP18.82■□□□□ 0.6
SIPA1-201ENST00000394224 GJA10Q969M2 543 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 FOXP1Q9H334 677 aaPredicted RBP18.82■□□□□ 0.6
SIPA1-201ENST00000394224 RCCD1A6NED2 376 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 NDUFA10O95299 355 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 KLRK1P26718 216 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 IFT81Q8WYA0 676 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 DYNLL2Q96FJ2 89 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 ZHX3Q9H4I2 956 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 CNNM2Q9H8M5 875 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 TBC1D7Q9P0N9 293 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 PARP1P09874 1014 aaKnown RBP18.82■□□□□ 0.6
SIPA1-201ENST00000394224 TBC1D8BQ0IIM8 1120 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 CYP26C1Q6V0L0 522 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 JAKMIP2Q96AA8 810 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 L1RE1Q9UN81 338 aa18.82■□□□□ 0.6
SIPA1-201ENST00000394224 LIFRP42702 1097 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 SARSP49591 514 aaKnown RBP18.81■□□□□ 0.6
SIPA1-201ENST00000394224 SGMS1Q86VZ5 419 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 SRBD1Q8N5C6 995 aaKnown RBP18.81■□□□□ 0.6
SIPA1-201ENST00000394224 CCDC155Q8N6L0 562 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 RRP36Q96EU6 259 aaKnown RBP18.81■□□□□ 0.6
SIPA1-201ENST00000394224 ZSCAN10Q96SZ4 725 aaPredicted RBP18.81■□□□□ 0.6
SIPA1-201ENST00000394224 MLXIPQ9HAP2 919 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 ATG3Q9NT62 314 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 BRD3Q15059 726 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 KANK3Q6NY19 840 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 SAP30BPQ9UHR5 308 aaKnown RBP18.81■□□□□ 0.6
SIPA1-201ENST00000394224 MAP3K15Q6ZN16 1313 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 PDE8AO60658 829 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 ATP2C2O75185 946 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 LETM2Q2VYF4 491 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 STAG2Q8N3U4 1231 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 SLC44A5Q8NCS7 719 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 RFX7Q2KHR2 1363 aa18.81■□□□□ 0.6
SIPA1-201ENST00000394224 RPN1P04843 607 aaKnown RBP18.8■□□□□ 0.6
SIPA1-201ENST00000394224 UQCRFS1P1P0C7P4 283 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 CHRNDQ07001 517 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 PKN1Q16512 942 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 TCP11X2Q5H9J9 407 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 APTXQ7Z2E3 356 aaKnown RBP18.8■□□□□ 0.6
SIPA1-201ENST00000394224 GPR101Q96P66 508 aaPredicted RBP18.8■□□□□ 0.6
SIPA1-201ENST00000394224 SLC4A9Q96Q91 983 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 SLC39A2Q9NP94 309 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 BTG4Q9NY30 223 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 EIF6P56537 245 aaKnown RBP18.8■□□□□ 0.6
SIPA1-201ENST00000394224 SRLQ86TD4 932 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 FCHSD1Q86WN1 690 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 KLHL34Q8N239 644 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 CSGALNACT2Q8N6G5 542 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 GOLGA5Q8TBA6 731 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 PANX2Q96RD6 677 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 NLRC4Q9NPP4 1024 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 KCND1Q9NSA2 647 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 SAR1BQ9Y6B6 198 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 FCER1AP12319 257 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 IL17AQ16552 155 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 SH2D3CQ8N5H7 860 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 LRWD1Q9UFC0 647 aa18.8■□□□□ 0.6
SIPA1-201ENST00000394224 BACH1O14867 736 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 KCNJ6P48051 423 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 ASIC1P78348 528 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 LRRC41Q15345 812 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 MCM9Q9NXL9 1143 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 CCDC194A0A1B0GVG4 234 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 CSF1RP07333 972 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 USP5P45974 858 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 PACSIN2Q9UNF0 486 aaPredicted RBP18.79■□□□□ 0.6
SIPA1-201ENST00000394224 PCNTO95613 3336 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 TMEM94Q12767 1356 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 GUCY2FP51841 1108 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 APBA1Q02410 837 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 TDRD12Q587J7 1177 aaKnown RBP18.79■□□□□ 0.6
SIPA1-201ENST00000394224 C2CD5Q86YS7 1000 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 TMTC1Q8IUR5 882 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 CTAGE1Q96RT6 745 aa18.79■□□□□ 0.6
SIPA1-201ENST00000394224 USP17L3A6NCW0 530 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 USP17L4A6NCW7 530 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 EIF3CLB5ME19 914 aaKnown RBP18.78■□□□□ 0.6
SIPA1-201ENST00000394224 PDE2AO00408 941 aaPredicted RBP18.78■□□□□ 0.6
SIPA1-201ENST00000394224 MOCS3O95396 460 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 TUBB4AP04350 444 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 ERCC5P28715 1186 aaPredicted RBP18.78■□□□□ 0.6
SIPA1-201ENST00000394224 ARHGAP25P42331 645 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 STIM1Q13586 685 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 CCDC181Q5TID7 509 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 USP17L1Q7RTZ2 530 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms