RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PEX26Q7Z412 305 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 RPAINQ86UA6 219 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 TRIM50Q86XT4 487 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 TRIM58Q8NG06 486 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 ENOX1Q8TC92 643 aaKnown RBP16.16■□□□□ 0.18
CCDC50-201ENST00000392455 ANKRD2Q9GZV1 360 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 CCHCR1Q8TD31 782 aa16.16■□□□□ 0.18
CCDC50-201ENST00000392455 BIN2Q9UBW5 565 aaPredicted RBP16.16■□□□□ 0.18
CCDC50-201ENST00000392455 RAPGEF6Q8TEU7 1601 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 GRIN2AQ12879 1464 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 CCDC169A6NNP5 214 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 HARSP12081 509 aaKnown RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 SKIP12755 728 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 ATF7P17544 494 aaPredicted RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 KRT71Q3SY84 523 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 STX19Q8N4C7 294 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 SLC17A8Q8NDX2 589 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 LRRC59Q96AG4 307 aaKnown RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 EDEM3Q9BZQ6 932 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 BICC1Q9H694 974 aaKnown RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 ANGPTL2Q9UKU9 493 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 THOC2Q8NI27 1593 aaKnown RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 TTC41PQ6P2S7 1318 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 AK2P54819 239 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 TBC1D8BQ0IIM8 1120 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 SEPT2Q15019 361 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 HADHQ16836 314 aaKnown RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 TMTC3Q6ZXV5 915 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 PPWD1Q96BP3 646 aaKnown RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 SLC5A4Q9NY91 659 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 PACSIN2Q9UNF0 486 aaPredicted RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 RPRD2Q5VT52 1461 aaKnown RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 TMCO4Q5TGY1 634 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 CABLES1Q8TDN4 633 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 ARHGEF10LQ9HCE6 1279 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 VWA3AA6NCI4 1184 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 HEXIM1O94992 359 aaKnown RBP16.15■□□□□ 0.18
CCDC50-201ENST00000392455 MID2Q9UJV3 735 aa16.15■□□□□ 0.18
CCDC50-201ENST00000392455 CCNT1O60563 726 aaKnown RBP16.14■□□□□ 0.18
CCDC50-201ENST00000392455 ZRANB1Q9UGI0 708 aa16.14■□□□□ 0.18
CCDC50-201ENST00000392455 CWF19L2Q2TBE0 894 aaKnown RBP16.14■□□□□ 0.17
CCDC50-201ENST00000392455 GIPC2Q8TF65 315 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 IFNKQ9P0W0 207 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 ABCA10Q8WWZ4 1543 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 BZW2Q9Y6E2 419 aaKnown RBP16.14■□□□□ 0.17
CCDC50-201ENST00000392455 OCA2Q04671 838 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 KRT81Q14533 505 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 AMFRQ9UKV5 643 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 GJA3Q9Y6H8 435 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 IGSF22Q8N9C0 903 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 LLPHQ9BRT6 129 aaKnown RBP16.14■□□□□ 0.17
CCDC50-201ENST00000392455 UPF3AQ9H1J1 476 aaKnown RBP16.14■□□□□ 0.17
CCDC50-201ENST00000392455 SETD1BQ9UPS6 1966 aaKnown RBP16.14■□□□□ 0.17
CCDC50-201ENST00000392455 PYGBP11216 843 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 PPP2R5AQ15172 486 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 DONSONQ9NYP3 566 aa16.14■□□□□ 0.17
CCDC50-201ENST00000392455 NOP56O00567 594 aaKnown RBP16.13■□□□□ 0.17
CCDC50-201ENST00000392455 TOM1O60784 492 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 PSMA3P25788 255 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 LRRC8BQ6P9F7 803 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 OR9Q1Q8NGQ5 310 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 EYA3Q99504 573 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 TRIM68Q6AZZ1 485 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
CCDC50-201ENST00000392455 CFAP61Q8NHU2 1237 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 SNX21Q969T3 373 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 PICK1Q9NRD5 415 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 IL9RQ01113 521 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 EIF4A2Q14240 407 aaKnown RBP16.13■□□□□ 0.17
CCDC50-201ENST00000392455 IQCB1Q15051 598 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 ZNF174Q15697 407 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 ATP6V0A4Q9HBG4 840 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 RIPOR2Q9Y4F9 1068 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 PCDHB15Q9Y5E8 787 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 MAP3K5Q99683 1374 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 KDM3AQ9Y4C1 1321 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 SERPINB10P48595 397 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 MTBPQ96DY7 904 aa16.13■□□□□ 0.17
CCDC50-201ENST00000392455 LETM2Q2VYF4 491 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 CCDC13Q8IYE1 715 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 HDAC11Q96DB2 347 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 MAP3K1Q13233 1512 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 MLKLQ8NB16 471 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 GTPBP10A4D1E9 387 aaKnown RBP16.12■□□□□ 0.17
CCDC50-201ENST00000392455 BAG2O95816 211 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 VPS41P49754 854 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 HDAC4P56524 1084 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 CCDC92Q53HC0 331 aaPredicted RBP16.12■□□□□ 0.17
CCDC50-201ENST00000392455 PHKBQ93100 1093 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 MED21Q13503 144 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 ATG16L1Q676U5 607 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
CCDC50-201ENST00000392455 ARHGEF37A1IGU5 675 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 MAP3K7O43318 606 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 ZKSCAN8Q15776 578 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms