RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 PRPF3O43395 683 aaKnown RBP19.89■□□□□ 0.77
UBL3-201ENST00000380680 GTPBP6O43824 516 aaPredicted RBP19.89■□□□□ 0.77
UBL3-201ENST00000380680 GTF2F1P35269 517 aaKnown RBP eCLIP19.89■□□□□ 0.77
UBL3-201ENST00000380680 PPP2R3AQ06190 1150 aa19.89■□□□□ 0.77
UBL3-201ENST00000380680 ALX1Q15699 326 aa19.89■□□□□ 0.77
UBL3-201ENST00000380680 BRIP1Q9BX63 1249 aa19.89■□□□□ 0.77
UBL3-201ENST00000380680 BCL2L12Q9HB09 334 aa19.89■□□□□ 0.77
UBL3-201ENST00000380680 PXDNQ92626 1479 aa19.89■□□□□ 0.77
UBL3-201ENST00000380680 A0A0G2JLW4 131 aa19.89■□□□□ 0.77
UBL3-201ENST00000380680 NELFCDQ8IXH7 590 aa19.89■□□□□ 0.77
UBL3-201ENST00000380680 TBC1D5Q92609 795 aa19.89■□□□□ 0.77
UBL3-201ENST00000380680 IGSF3O75054 1194 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 RPL13P26373 211 aaKnown RBP19.88■□□□□ 0.77
UBL3-201ENST00000380680 IFI16Q16666 785 aaKnown RBP19.88■□□□□ 0.77
UBL3-201ENST00000380680 GOLPH3LQ9H4A5 285 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 PSTPIP2Q9H939 334 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 CCDC172P0C7W6 258 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 RAPGEF1Q13905 1077 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 NKX1-1Q15270 411 aaPredicted RBP19.88■□□□□ 0.77
UBL3-201ENST00000380680 GALNT17Q6IS24 598 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 CTR9Q6PD62 1173 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 EPSTI1Q96J88 318 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 SCLT1Q96NL6 688 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 MEGF6O75095 1541 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 CETN3O15182 167 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 TRAPPC10P48553 1259 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 SP4Q02446 784 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 SEPT12Q8IYM1 358 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 ZNF34Q8IZ26 560 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 PDLIM2Q96JY6 352 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 GSDMAQ96QA5 445 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 SH2D4AQ9H788 454 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 IKBKBO14920 756 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 U2AF2P26368 475 aaKnown RBP eCLIP19.88■□□□□ 0.77
UBL3-201ENST00000380680 CETN2P41208 172 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 MORC3Q14149 939 aa19.88■□□□□ 0.77
UBL3-201ENST00000380680 LONP1P36776 959 aaKnown RBP19.87■□□□□ 0.77
UBL3-201ENST00000380680 USP17L2Q6R6M4 530 aa19.87■□□□□ 0.77
UBL3-201ENST00000380680 CPXCR1Q8N123 301 aa19.87■□□□□ 0.77
UBL3-201ENST00000380680 PCDHA12Q9UN75 941 aa19.87■□□□□ 0.77
UBL3-201ENST00000380680 SIGLEC1Q9BZZ2 1709 aa19.87■□□□□ 0.77
UBL3-201ENST00000380680 ABCC12Q96J65 1359 aa19.87■□□□□ 0.77
UBL3-201ENST00000380680 KCNJ18B7U540 433 aa19.87■□□□□ 0.77
UBL3-201ENST00000380680 SLFN14P0C7P3 912 aa19.87■□□□□ 0.77
UBL3-201ENST00000380680 KCNJ12Q14500 433 aa19.87■□□□□ 0.77
UBL3-201ENST00000380680 ATP1A3P13637 1013 aa19.87■□□□□ 0.77
UBL3-201ENST00000380680 DLGAP5Q15398 846 aa19.87■□□□□ 0.77
UBL3-201ENST00000380680 SRPRBQ9Y5M8 271 aaKnown RBP19.87■□□□□ 0.77
UBL3-201ENST00000380680 RPN1P04843 607 aaKnown RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 ETF1P62495 437 aaKnown RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 CERKLQ49MI3 558 aaPredicted RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 C2CD5Q86YS7 1000 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 ENAHQ8N8S7 591 aaPredicted RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 ARHGEF1Q92888 912 aaKnown RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 FAM84BQ96KN1 310 aaPredicted RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 SHPRHQ149N8 1683 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 WDR19Q8NEZ3 1342 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 NCOA3Q9Y6Q9 1424 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 LMAN1P49257 510 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 PCDHA4Q9UN74 947 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 DNM3Q9UQ16 869 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 PPEF1O14829 653 aaPredicted RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 GOLGA8FQ08AF8 430 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 GOLGA8DPQ0D2H9 430 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 NAPGQ99747 312 aaPredicted RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 GOPCQ9HD26 462 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 FAM207AQ9NSI2 230 aaPredicted RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 FMR1NBQ8N0W7 255 aaPredicted RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 MARCH10Q8NA82 808 aaPredicted RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 CTNNBL1Q8WYA6 563 aaPredicted RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 SERPINB13Q9UIV8 391 aa19.86■□□□□ 0.77
UBL3-201ENST00000380680 ZNF215Q9UL58 517 aaPredicted RBP19.86■□□□□ 0.77
UBL3-201ENST00000380680 DCP1AQ9NPI6 582 aaPredicted RBP19.85■□□□□ 0.77
UBL3-201ENST00000380680 MAN1B1Q9UKM7 699 aa19.85■□□□□ 0.77
UBL3-201ENST00000380680 NMT2O60551 498 aa19.85■□□□□ 0.77
UBL3-201ENST00000380680 KIAA0754O94854 1291 aa19.85■□□□□ 0.77
UBL3-201ENST00000380680 IFFO1Q0D2I5 559 aa19.85■□□□□ 0.77
UBL3-201ENST00000380680 DBNDD1Q9H9R9 158 aa19.85■□□□□ 0.77
UBL3-201ENST00000380680 ZHX1Q9UKY1 873 aaPredicted RBP19.85■□□□□ 0.77
UBL3-201ENST00000380680 RIMS1Q86UR5 1692 aaKnown RBP19.85■□□□□ 0.77
UBL3-201ENST00000380680 NUP58Q9BVL2 599 aa19.84■□□□□ 0.77
UBL3-201ENST00000380680 BCCIPQ9P287 314 aaKnown RBP eCLIP19.84■□□□□ 0.77
UBL3-201ENST00000380680 UBN2Q6ZU65 1347 aa19.84■□□□□ 0.77
UBL3-201ENST00000380680 ERCC5P28715 1186 aaPredicted RBP19.84■□□□□ 0.77
UBL3-201ENST00000380680 SGMS1Q86VZ5 419 aa19.84■□□□□ 0.77
UBL3-201ENST00000380680 OR8K1Q8NGG5 319 aa19.84■□□□□ 0.77
UBL3-201ENST00000380680 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.84■□□□□ 0.77
UBL3-201ENST00000380680 GJA3Q9Y6H8 435 aa19.84■□□□□ 0.77
UBL3-201ENST00000380680 H7C1D1 291 aa19.84■□□□□ 0.77
UBL3-201ENST00000380680 PTPREP23469 700 aa19.84■□□□□ 0.77
UBL3-201ENST00000380680 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.84■□□□□ 0.77
UBL3-201ENST00000380680 KDM6AO15550 1401 aaPredicted RBP19.84■□□□□ 0.77
UBL3-201ENST00000380680 CDC25BP30305 580 aa19.83■□□□□ 0.77
UBL3-201ENST00000380680 ICA1Q05084 483 aa19.83■□□□□ 0.77
UBL3-201ENST00000380680 TMTC3Q6ZXV5 915 aa19.83■□□□□ 0.77
UBL3-201ENST00000380680 OXER1Q8TDS5 423 aa19.83■□□□□ 0.77
UBL3-201ENST00000380680 SH3RF3Q8TEJ3 882 aaPredicted RBP19.83■□□□□ 0.77
UBL3-201ENST00000380680 PCDHA1Q9Y5I3 950 aa19.83■□□□□ 0.77
UBL3-201ENST00000380680 NEFHP12036 1026 aa19.83■□□□□ 0.77
UBL3-201ENST00000380680 ARID5BQ14865 1188 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms