RNA–Protein interactions for RNA: ENST00000376048.9

PRDM2-204, Transcript of PR/SET domain 2, humanhuman

TSL 2 BASIC

Gene PRDM2, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-204ENST00000376048 CHD4Q14839 1912 aa13.5□□□□□ -0.25
PRDM2-204ENST00000376048 BRD2P25440 801 aaKnown RBP13.49□□□□□ -0.25
PRDM2-204ENST00000376048 CASP8Q14790 479 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 CRACR2BQ8N4Y2 399 aaPredicted RBP13.49□□□□□ -0.25
PRDM2-204ENST00000376048 HINFPQ9BQA5 517 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 TFCP2L1Q9NZI6 479 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 HDAC6Q9UBN7 1215 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 RRP15Q9Y3B9 282 aaKnown RBP13.49□□□□□ -0.25
PRDM2-204ENST00000376048 DOT1LQ8TEK3 1739 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 MYH6P13533 1939 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 MROH5Q6ZUA9 1318 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 PPP1R3GB7ZBB8 358 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 ERCC5P28715 1186 aaPredicted RBP13.49□□□□□ -0.25
PRDM2-204ENST00000376048 IGHMBP2P38935 993 aaKnown RBP13.49□□□□□ -0.25
PRDM2-204ENST00000376048 AKNAD1Q5T1N1 836 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 MFSD6Q6ZSS7 791 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 SRLQ86TD4 932 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 MSANTD4Q8NCY6 345 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 CHP1Q99653 195 aa13.49□□□□□ -0.25
PRDM2-204ENST00000376048 FOXP1Q9H334 677 aaPredicted RBP13.49□□□□□ -0.25
PRDM2-204ENST00000376048 STK36Q9NRP7 1315 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 ARHGAP25P42331 645 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 WTAPQ15007 396 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 TTF1Q15361 905 aaPredicted RBP13.48□□□□□ -0.25
PRDM2-204ENST00000376048 CDKAL1Q5VV42 579 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 CEP112Q8N8E3 955 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 TRIML1Q8N9V2 468 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 RASSF4Q9H2L5 321 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 PATL2C9JE40 543 aaKnown RBP13.48□□□□□ -0.25
PRDM2-204ENST00000376048 USP5P45974 858 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 ZNF174Q15697 407 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 ELOA2Q8IYF1 753 aaPredicted RBP13.48□□□□□ -0.25
PRDM2-204ENST00000376048 ZC3H15Q8WU90 426 aaKnown RBP13.48□□□□□ -0.25
PRDM2-204ENST00000376048 HNRNPLLQ8WVV9 542 aaKnown RBP13.48□□□□□ -0.25
PRDM2-204ENST00000376048 TAB2Q9NYJ8 693 aa13.48□□□□□ -0.25
PRDM2-204ENST00000376048 SRGAP2O75044 1071 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 ZMYND10O75800 440 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 CYP7A1P22680 504 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 IRX3P78415 501 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-204ENST00000376048 KRT31Q15323 416 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-204ENST00000376048 RIN2Q8WYP3 895 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-204ENST00000376048 CTAGE15A4D2H0 777 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 N4BP3O15049 544 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 DEXIO95424 95 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 UQCRFS1P1P0C7P4 283 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 CTAGE8P0CG41 777 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 CTAGE6Q86UF2 777 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 CTAGE4Q8IX94 777 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
PRDM2-204ENST00000376048 FANCBQ8NB91 859 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 ZNF384Q8TF68 577 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 EEF2KMTQ96G04 330 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 NUP88Q99567 741 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-204ENST00000376048 NAPGQ99747 312 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-204ENST00000376048 PSD3Q9NYI0 1048 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 GUCA1BQ9UMX6 200 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 LEKR1Q6ZMV7 388 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 ZNF654Q8IZM8 581 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 WASF1Q92558 559 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 GPR101Q96P66 508 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-204ENST00000376048 GPBP1L1Q9HC44 474 aaPredicted RBP13.47□□□□□ -0.25
PRDM2-204ENST00000376048 ABHD10Q9NUJ1 306 aa13.47□□□□□ -0.25
PRDM2-204ENST00000376048 ATRNO75882 1429 aa13.46□□□□□ -0.25
PRDM2-204ENST00000376048 ADAMTS3O15072 1205 aa13.46□□□□□ -0.25
PRDM2-204ENST00000376048 NMT2O60551 498 aa13.46□□□□□ -0.25
PRDM2-204ENST00000376048 AKAP17AQ02040 695 aaKnown RBP13.46□□□□□ -0.25
PRDM2-204ENST00000376048 TXNRD3Q86VQ6 643 aa13.46□□□□□ -0.25
PRDM2-204ENST00000376048 GSPT2Q8IYD1 628 aaKnown RBP13.46□□□□□ -0.25
PRDM2-204ENST00000376048 XDHP47989 1333 aa13.46□□□□□ -0.26
PRDM2-204ENST00000376048 COL1A1P02452 1464 aaPredicted RBP13.46□□□□□ -0.26
PRDM2-204ENST00000376048 TRIM75PA6NK02 468 aa13.46□□□□□ -0.26
PRDM2-204ENST00000376048 TNNT3P45378 269 aaPredicted RBP13.46□□□□□ -0.26
PRDM2-204ENST00000376048 KANK3Q6NY19 840 aa13.46□□□□□ -0.26
PRDM2-204ENST00000376048 MTRQ99707 1265 aa13.46□□□□□ -0.26
PRDM2-204ENST00000376048 NAA15Q9BXJ9 866 aaKnown RBP13.46□□□□□ -0.26
PRDM2-204ENST00000376048 REXO2Q9Y3B8 237 aaKnown RBP13.46□□□□□ -0.26
PRDM2-204ENST00000376048 MYH2Q9UKX2 1941 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 ABCC12Q96J65 1359 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 SPATA31A5Q5VU36 1347 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 SPATA31A7Q8IWB4 1347 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 ERLIN1O75477 346 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 KRT9P35527 623 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 SH3RF1Q7Z6J0 888 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 CNGA4Q8IV77 575 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 CAPZA3Q96KX2 299 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 FAM204AQ9H8W3 233 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 CWC15Q9P013 229 aaKnown RBP13.45□□□□□ -0.26
PRDM2-204ENST00000376048 PLEKHA8P1O95397 391 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 AMPD2Q01433 879 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 PKN1Q16512 942 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 FILIP1LQ4L180 1135 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 RRAGBQ5VZM2 374 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 ZNF512BQ96KM6 892 aaPredicted RBP13.45□□□□□ -0.26
PRDM2-204ENST00000376048 AATFQ9NY61 560 aaKnown RBP eCLIP13.45□□□□□ -0.26
PRDM2-204ENST00000376048 MYH3P11055 1940 aa13.45□□□□□ -0.26
PRDM2-204ENST00000376048 TRIM49BA6NDI0 452 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms