RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 RFX7Q2KHR2 1363 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 A0A1W2PQ27 194 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 A0A1W2PQ64 194 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 A0A1W2PQD8 194 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 C21orf2O43822 256 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 CLSTN1O94985 981 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 EN1Q05925 392 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 ALX1Q15699 326 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 BLIDQ8IZY5 108 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 PARP3Q9Y6F1 533 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 PPEF1O14829 653 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 AKR1B1P15121 316 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 TXLNAP40222 546 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 KCTD19Q17RG1 926 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 ZNF512BQ96KM6 892 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 ATP8A2Q9NTI2 1148 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 FBXO2Q9UK22 296 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 TFR2Q9UP52 801 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 PNPLA7Q6ZV29 1317 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 GNG11P61952 73 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 RESP18Q5W5W9 173 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 ARMCX5Q6P1M9 558 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 DTHD1Q6ZMT9 781 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 PPFIBP1Q86W92 1011 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 TANGO6Q9C0B7 1094 aa12.24□□□□□ -0.45
CXCL12-203ENST00000374429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 ARPP21Q9UBL0 812 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 MYO5AQ9Y4I1 1855 aaKnown RBP12.24□□□□□ -0.45
CXCL12-203ENST00000374429 COL1A1P02452 1464 aaPredicted RBP12.23□□□□□ -0.45
CXCL12-203ENST00000374429 ASIC1P78348 528 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 PPARDQ03181 441 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 LRRC41Q15345 812 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 FKBP15Q5T1M5 1219 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 C12orf60Q5U649 245 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 WWC2Q6AWC2 1192 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 RNF26Q9BY78 433 aaPredicted RBP12.23□□□□□ -0.45
CXCL12-203ENST00000374429 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 PRKG1Q13976 671 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 SKIDA1Q1XH10 827 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 COL23A1Q86Y22 540 aaPredicted RBP12.23□□□□□ -0.45
CXCL12-203ENST00000374429 TRERF1Q96PN7 1200 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 TDRD3Q9H7E2 651 aaKnown RBP12.23□□□□□ -0.45
CXCL12-203ENST00000374429 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
CXCL12-203ENST00000374429 SORBS3O60504 671 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 PTPREP23469 700 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 EVCP57679 992 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
CXCL12-203ENST00000374429 AOC3Q16853 763 aa12.23□□□□□ -0.45
CXCL12-203ENST00000374429 ZNF215Q9UL58 517 aaPredicted RBP12.23□□□□□ -0.45
CXCL12-203ENST00000374429 USP17L15C9J2P7 530 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 USP17L13C9JLJ4 530 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 USP17L11C9JVI0 530 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 USP17L18D6R9N7 530 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 USP17L22D6RA61 530 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 USP17L17D6RBQ6 530 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 USP17L19D6RCP7 530 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 USP17L20D6RJB6 530 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 TPM3P06753 285 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 ARID5AQ03989 594 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 USP17L24Q0WX57 530 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 USP17L6PQ6QN14 398 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 PDCL2Q8N4E4 241 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 DRC1Q96MC2 740 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 FOXP1Q9H334 677 aaPredicted RBP12.22□□□□□ -0.45
CXCL12-203ENST00000374429 SLIT2O94813 1529 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 A0A0U1RQJ8 604 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 CYTH3O43739 400 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
CXCL12-203ENST00000374429 PTPROQ16827 1216 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 RCSD1Q6JBY9 416 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 C2CD5Q86YS7 1000 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 ATRIPQ8WXE1 791 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 PAGE5Q96GU1 130 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 TRIM47Q96LD4 638 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 PLEKHA4Q9H4M7 779 aa12.22□□□□□ -0.45
CXCL12-203ENST00000374429 POTEMA6NI47 508 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 TFRCP02786 760 aaKnown RBP12.21□□□□□ -0.45
CXCL12-203ENST00000374429 GSTO1P78417 241 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 ATL3Q6DD88 541 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 MAEAQ7L5Y9 396 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 MMRN2Q9H8L6 949 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 SLC39A2Q9NP94 309 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 DDX4Q9NQI0 724 aaKnown RBP12.21□□□□□ -0.45
CXCL12-203ENST00000374429 KCNG1Q9UIX4 513 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 CHMP2AO43633 222 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 KRT18P05783 430 aaKnown RBP12.21□□□□□ -0.45
CXCL12-203ENST00000374429 CHRM1P11229 460 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-203ENST00000374429 FAM193AP78312 1265 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 DEFB132Q7Z7B7 95 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 MNS1Q8NEH6 495 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 TBCKQ8TEA7 893 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 RRP36Q96EU6 259 aaKnown RBP12.21□□□□□ -0.45
CXCL12-203ENST00000374429 DISP2A7MBM2 1401 aa12.21□□□□□ -0.45
CXCL12-203ENST00000374429 RASA1P20936 1047 aa12.21□□□□□ -0.46
CXCL12-203ENST00000374429 ELF2Q15723 593 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms