RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 ATP2C1P98194 919 aaPredicted RBP20.42■□□□□ 0.86
CTSA-204ENST00000372484 APOBEC3HQ6NTF7 200 aaKnown RBP20.42■□□□□ 0.86
CTSA-204ENST00000372484 KANK3Q6NY19 840 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 USP17L2Q6R6M4 530 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 EPSTI1Q96J88 318 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 SPZ1Q9BXG8 430 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 BARHL2Q9NY43 387 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 SERPINB13Q9UIV8 391 aa20.42■□□□□ 0.86
CTSA-204ENST00000372484 MCM7P33993 719 aa20.41■□□□□ 0.86
CTSA-204ENST00000372484 NOVP48745 357 aa20.41■□□□□ 0.86
CTSA-204ENST00000372484 EZH2Q15910 746 aaKnown RBP20.41■□□□□ 0.86
CTSA-204ENST00000372484 OSBPL5Q9H0X9 879 aaPredicted RBP20.41■□□□□ 0.86
CTSA-204ENST00000372484 PLIN4Q96Q06 1357 aa20.41■□□□□ 0.86
CTSA-204ENST00000372484 GOLGB1Q14789 3259 aaKnown RBP20.41■□□□□ 0.86
CTSA-204ENST00000372484 VWA3AA6NCI4 1184 aa20.41■□□□□ 0.86
CTSA-204ENST00000372484 ACTN4O43707 911 aaKnown RBP20.41■□□□□ 0.86
CTSA-204ENST00000372484 CRKP46108 304 aa20.41■□□□□ 0.86
CTSA-204ENST00000372484 SYMPKQ92797 1274 aaKnown RBP20.41■□□□□ 0.86
CTSA-204ENST00000372484 CPVLQ9H3G5 476 aa20.41■□□□□ 0.86
CTSA-204ENST00000372484 MTMR4Q9NYA4 1195 aa20.41■□□□□ 0.86
CTSA-204ENST00000372484 STXBP3O00186 592 aa20.4■□□□□ 0.86
CTSA-204ENST00000372484 IKBKBO14920 756 aa20.4■□□□□ 0.86
CTSA-204ENST00000372484 EN1Q05925 392 aaPredicted RBP20.4■□□□□ 0.86
CTSA-204ENST00000372484 GALNT17Q6IS24 598 aa20.4■□□□□ 0.86
CTSA-204ENST00000372484 KIAA0825Q8IV33 1275 aa20.4■□□□□ 0.86
CTSA-204ENST00000372484 RASGRP4Q8TDF6 673 aa20.4■□□□□ 0.86
CTSA-204ENST00000372484 CNKSR1Q969H4 720 aa20.4■□□□□ 0.86
CTSA-204ENST00000372484 STK32BQ9NY57 414 aa20.4■□□□□ 0.86
CTSA-204ENST00000372484 SWAP70Q9UH65 585 aa20.4■□□□□ 0.86
CTSA-204ENST00000372484 CCDC194A0A1B0GVG4 234 aa20.39■□□□□ 0.86
CTSA-204ENST00000372484 ECE2O60344 883 aa20.39■□□□□ 0.86
CTSA-204ENST00000372484 AKR1B1P15121 316 aa20.39■□□□□ 0.86
CTSA-204ENST00000372484 NOLC1Q14978 699 aaKnown RBP eCLIP20.39■□□□□ 0.869e-12■■□□□ 12.5
CTSA-204ENST00000372484 NCAPHQ15003 741 aa20.39■□□□□ 0.86
CTSA-204ENST00000372484 STRIP1Q5VSL9 837 aa20.39■□□□□ 0.86
CTSA-204ENST00000372484 DHX58Q96C10 678 aa20.39■□□□□ 0.86
CTSA-204ENST00000372484 CCDC34Q96HJ3 373 aa20.39■□□□□ 0.86
CTSA-204ENST00000372484 SCN9AQ15858 1988 aa20.39■□□□□ 0.86
CTSA-204ENST00000372484 M0R2N6 131 aa20.39■□□□□ 0.85
CTSA-204ENST00000372484 PRR29P0C7W0 189 aa20.39■□□□□ 0.85
CTSA-204ENST00000372484 GRAMD1CQ8IYS0 662 aa20.39■□□□□ 0.85
CTSA-204ENST00000372484 C17orf53Q8N3J3 647 aaPredicted RBP20.39■□□□□ 0.85
CTSA-204ENST00000372484 DAGLBQ8NCG7 672 aa20.39■□□□□ 0.85
CTSA-204ENST00000372484 SMARCE1Q969G3 411 aa20.39■□□□□ 0.85
CTSA-204ENST00000372484 RRP36Q96EU6 259 aaKnown RBP20.39■□□□□ 0.85
CTSA-204ENST00000372484 ZDHHC15Q96MV8 337 aa20.39■□□□□ 0.85
CTSA-204ENST00000372484 PYCARDQ9ULZ3 195 aa20.39■□□□□ 0.85
CTSA-204ENST00000372484 A0A087X0B3 334 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 USP17L5A8MUK1 530 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 HLA-DOAP06340 250 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 NT5DC1Q5TFE4 455 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 HOMER1Q86YM7 354 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 FAM177A1Q8N128 213 aaPredicted RBP20.38■□□□□ 0.85
CTSA-204ENST00000372484 KIAA1524Q8TCG1 905 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 CAMKK2Q96RR4 588 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 SEC63Q9UGP8 760 aaKnown RBP20.38■□□□□ 0.85
CTSA-204ENST00000372484 SMARCA1P28370 1054 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 NFIAQ12857 509 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 CCDC144BQ3MJ40 725 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 MAN1B1Q9UKM7 699 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 PCDHA6Q9UN73 950 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 PCDHA8Q9Y5H6 950 aa20.38■□□□□ 0.85
CTSA-204ENST00000372484 PDHBP11177 359 aa20.37■□□□□ 0.85
CTSA-204ENST00000372484 BMP6P22004 513 aa20.37■□□□□ 0.85
CTSA-204ENST00000372484 NAPAP54920 295 aa20.37■□□□□ 0.85
CTSA-204ENST00000372484 EIF6P56537 245 aaKnown RBP20.37■□□□□ 0.85
CTSA-204ENST00000372484 FKBP1AP62942 108 aaKnown RBP20.37■□□□□ 0.85
CTSA-204ENST00000372484 MYL5Q02045 173 aa20.37■□□□□ 0.85
CTSA-204ENST00000372484 DACT2Q5SW24 774 aa20.37■□□□□ 0.85
CTSA-204ENST00000372484 CCDC12Q8WUD4 166 aaPredicted RBP20.37■□□□□ 0.85
CTSA-204ENST00000372484 VAT1LQ9HCJ6 419 aa20.37■□□□□ 0.85
CTSA-204ENST00000372484 MYO3BQ8WXR4 1341 aa20.37■□□□□ 0.85
CTSA-204ENST00000372484 SLFN14P0C7P3 912 aa20.36■□□□□ 0.85
CTSA-204ENST00000372484 LMOD1P29536 600 aaPredicted RBP20.36■□□□□ 0.85
CTSA-204ENST00000372484 SARSP49591 514 aaKnown RBP20.36■□□□□ 0.85
CTSA-204ENST00000372484 RBM5P52756 815 aaKnown RBP eCLIP20.36■□□□□ 0.851e-13■■■□□ 18.6
CTSA-204ENST00000372484 LRMPQ12912 555 aa20.36■□□□□ 0.85
CTSA-204ENST00000372484 LRRC47Q8N1G4 583 aaKnown RBP20.36■□□□□ 0.85
CTSA-204ENST00000372484 MRIQ9BWK5 157 aa20.36■□□□□ 0.85
CTSA-204ENST00000372484 ZMYND12Q9H0C1 365 aa20.36■□□□□ 0.85
CTSA-204ENST00000372484 RGS17Q9UGC6 210 aaPredicted RBP20.36■□□□□ 0.85
CTSA-204ENST00000372484 IGKV6D-41A0A0C4DH26 115 aa20.36■□□□□ 0.85
CTSA-204ENST00000372484 SMC2O95347 1197 aa20.36■□□□□ 0.85
CTSA-204ENST00000372484 TTLL1O95922 423 aa20.36■□□□□ 0.85
CTSA-204ENST00000372484 SHMT1P34896 483 aa20.36■□□□□ 0.85
CTSA-204ENST00000372484 AOC3Q16853 763 aa20.36■□□□□ 0.85
CTSA-204ENST00000372484 ARL6IP4Q66PJ3 421 aaKnown RBP20.36■□□□□ 0.85
CTSA-204ENST00000372484 POTEAQ6S8J7 498 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 CLEC10AQ8IUN9 316 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 C7orf43Q8WVR3 580 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 PIGSQ96S52 555 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 UBA5Q9GZZ9 404 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 SPTLC3Q9NUV7 552 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 IFNKQ9P0W0 207 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 PCDHAC2Q9Y5I4 1007 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
CTSA-204ENST00000372484 AFMP43652 599 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 IL17AQ16552 155 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 INF2Q27J81 1249 aa20.35■□□□□ 0.85
CTSA-204ENST00000372484 TRIML1Q8N9V2 468 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms