RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SLC25A27O95847 323 aa19.21■□□□□ 0.67
CKS1B-202ENST00000368436 LRIT3Q3SXY7 679 aa19.21■□□□□ 0.67
CKS1B-202ENST00000368436 GPR153Q6NV75 609 aa19.21■□□□□ 0.67
CKS1B-202ENST00000368436 APPBP2Q92624 585 aa19.21■□□□□ 0.67
CKS1B-202ENST00000368436 OSBP2Q969R2 916 aa19.21■□□□□ 0.67
CKS1B-202ENST00000368436 GOPCQ9HD26 462 aa19.21■□□□□ 0.67
CKS1B-202ENST00000368436 FBXO28Q9NVF7 368 aa19.21■□□□□ 0.67
CKS1B-202ENST00000368436 ROBO3Q96MS0 1386 aa19.2■□□□□ 0.66
CKS1B-202ENST00000368436 RNF113AO15541 343 aaKnown RBP19.2■□□□□ 0.66
CKS1B-202ENST00000368436 SEPT4O43236 478 aa19.2■□□□□ 0.66
CKS1B-202ENST00000368436 FCER1AP12319 257 aa19.2■□□□□ 0.66
CKS1B-202ENST00000368436 RASA1P20936 1047 aa19.2■□□□□ 0.66
CKS1B-202ENST00000368436 RIOX2Q8IUF8 465 aa19.2■□□□□ 0.66
CKS1B-202ENST00000368436 TDHQ8IZJ6 230 aa19.2■□□□□ 0.66
CKS1B-202ENST00000368436 ARRDC4Q8NCT1 418 aa19.2■□□□□ 0.66
CKS1B-202ENST00000368436 GPATCH3Q96I76 525 aa19.2■□□□□ 0.66
CKS1B-202ENST00000368436 MAML3Q96JK9 1138 aa19.2■□□□□ 0.66
CKS1B-202ENST00000368436 UBE2OQ9C0C9 1292 aaKnown RBP19.2■□□□□ 0.66
CKS1B-202ENST00000368436 VWA5AO00534 786 aa19.19■□□□□ 0.66
CKS1B-202ENST00000368436 ZFYP08048 801 aaPredicted RBP19.19■□□□□ 0.66
CKS1B-202ENST00000368436 PPP1R9AQ9ULJ8 1098 aa19.19■□□□□ 0.66
CKS1B-202ENST00000368436 LAMA3Q16787 3333 aa19.19■□□□□ 0.66
CKS1B-202ENST00000368436 MYH4Q9Y623 1939 aa19.19■□□□□ 0.66
CKS1B-202ENST00000368436 SMCHD1A6NHR9 2005 aa19.18■□□□□ 0.66
CKS1B-202ENST00000368436 PRAMEF19Q5SWL8 479 aa19.18■□□□□ 0.66
CKS1B-202ENST00000368436 FAM83BQ5T0W9 1011 aa19.18■□□□□ 0.66
CKS1B-202ENST00000368436 GJC2Q5T442 439 aaPredicted RBP19.18■□□□□ 0.66
CKS1B-202ENST00000368436 TSHZ3Q63HK5 1081 aa19.18■□□□□ 0.66
CKS1B-202ENST00000368436 SAMD1Q6SPF0 538 aaPredicted RBP19.18■□□□□ 0.66
CKS1B-202ENST00000368436 REPS2Q8NFH8 660 aa19.18■□□□□ 0.66
CKS1B-202ENST00000368436 MKNK2Q9HBH9 465 aa19.18■□□□□ 0.66
CKS1B-202ENST00000368436 NYAP2Q9P242 653 aa19.18■□□□□ 0.66
CKS1B-202ENST00000368436 ZNF214Q9UL59 606 aaPredicted RBP19.18■□□□□ 0.66
CKS1B-202ENST00000368436 MINDY4BA8MYZ0 360 aa19.17■□□□□ 0.66
CKS1B-202ENST00000368436 GPAA1O43292 621 aa19.17■□□□□ 0.66
CKS1B-202ENST00000368436 STAT3P40763 770 aa19.17■□□□□ 0.66
CKS1B-202ENST00000368436 MMP19Q99542 508 aa19.17■□□□□ 0.66
CKS1B-202ENST00000368436 EPB41L4AQ9HCS5 686 aaPredicted RBP19.17■□□□□ 0.66
CKS1B-202ENST00000368436 NRBP1Q9UHY1 535 aa19.17■□□□□ 0.66
CKS1B-202ENST00000368436 DIS3Q9Y2L1 958 aaKnown RBP19.17■□□□□ 0.66
CKS1B-202ENST00000368436 LTBP2Q14767 1821 aa19.16■□□□□ 0.66
CKS1B-202ENST00000368436 IGKV6D-41A0A0C4DH26 115 aa19.16■□□□□ 0.66
CKS1B-202ENST00000368436 GNAT2P19087 354 aa19.16■□□□□ 0.66
CKS1B-202ENST00000368436 COPB2P35606 906 aa19.16■□□□□ 0.66
CKS1B-202ENST00000368436 ATN1P54259 1190 aaPredicted RBP19.16■□□□□ 0.66
CKS1B-202ENST00000368436 MDM2Q00987 491 aaPredicted RBP19.16■□□□□ 0.66
CKS1B-202ENST00000368436 ANO1Q5XXA6 986 aa19.16■□□□□ 0.66
CKS1B-202ENST00000368436 TTC41PQ6P2S7 1318 aa19.16■□□□□ 0.66
CKS1B-202ENST00000368436 PATL2C9JE40 543 aaKnown RBP19.15■□□□□ 0.66
CKS1B-202ENST00000368436 F5H6K3 240 aa19.15■□□□□ 0.66
CKS1B-202ENST00000368436 M0R2C6 588 aa19.15■□□□□ 0.66
CKS1B-202ENST00000368436 RTP1P59025 263 aa19.15■□□□□ 0.66
CKS1B-202ENST00000368436 KLRC3Q07444 240 aa19.15■□□□□ 0.66
CKS1B-202ENST00000368436 KCTD2Q14681 263 aa19.15■□□□□ 0.66
CKS1B-202ENST00000368436 ZNF792Q3KQV3 632 aa19.15■□□□□ 0.66
CKS1B-202ENST00000368436 SLC39A5Q6ZMH5 540 aa19.15■□□□□ 0.66
CKS1B-202ENST00000368436 STK11IPQ8N1F8 1099 aa19.15■□□□□ 0.66
CKS1B-202ENST00000368436 SLF1Q9BQI6 1058 aa19.15■□□□□ 0.66
CKS1B-202ENST00000368436 KBTBD13C9JR72 458 aa19.14■□□□□ 0.65
CKS1B-202ENST00000368436 RAD21O60216 631 aa19.14■□□□□ 0.65
CKS1B-202ENST00000368436 NDUFB10O96000 172 aa19.14■□□□□ 0.65
CKS1B-202ENST00000368436 PGK2P07205 417 aa19.14■□□□□ 0.65
CKS1B-202ENST00000368436 SNX17Q15036 470 aa19.14■□□□□ 0.65
CKS1B-202ENST00000368436 LRRFIP1Q32MZ4 808 aaKnown RBP19.14■□□□□ 0.65
CKS1B-202ENST00000368436 IFNL3Q8IZI9 196 aa19.14■□□□□ 0.65
CKS1B-202ENST00000368436 PI4K2BQ8TCG2 481 aa19.14■□□□□ 0.65
CKS1B-202ENST00000368436 MKL1Q969V6 931 aa19.14■□□□□ 0.65
CKS1B-202ENST00000368436 NUP88Q99567 741 aaPredicted RBP19.14■□□□□ 0.65
CKS1B-202ENST00000368436 TINF2Q9BSI4 451 aa19.14■□□□□ 0.65
CKS1B-202ENST00000368436 PCDHB15Q9Y5E8 787 aa19.14■□□□□ 0.65
CKS1B-202ENST00000368436 TDO2P48775 406 aa19.13■□□□□ 0.65
CKS1B-202ENST00000368436 LRRC41Q15345 812 aa19.13■□□□□ 0.65
CKS1B-202ENST00000368436 ZNF444Q8N0Y2 327 aaPredicted RBP19.13■□□□□ 0.65
CKS1B-202ENST00000368436 PRPF38AQ8NAV1 312 aaKnown RBP19.13■□□□□ 0.65
CKS1B-202ENST00000368436 LBHD1Q9BQE6 289 aaPredicted RBP19.13■□□□□ 0.65
CKS1B-202ENST00000368436 ZNF287Q9HBT7 754 aa19.13■□□□□ 0.65
CKS1B-202ENST00000368436 CLIP2Q9UDT6 1046 aa19.13■□□□□ 0.65
CKS1B-202ENST00000368436 SYNPO2Q9UMS6 1093 aa19.13■□□□□ 0.65
CKS1B-202ENST00000368436 ATP2A1O14983 1001 aa19.12■□□□□ 0.65
CKS1B-202ENST00000368436 APPP05067 770 aa19.12■□□□□ 0.65
CKS1B-202ENST00000368436 FAM47AQ5JRC9 791 aa19.12■□□□□ 0.65
CKS1B-202ENST00000368436 C1orf53Q5VUE5 145 aa19.12■□□□□ 0.65
CKS1B-202ENST00000368436 TEX13BQ9BXU2 312 aa19.12■□□□□ 0.65
CKS1B-202ENST00000368436 ATP11BQ9Y2G3 1177 aa19.12■□□□□ 0.65
CKS1B-202ENST00000368436 DNAH12Q6ZR08 3092 aa19.11■□□□□ 0.65
CKS1B-202ENST00000368436 ERC2O15083 957 aa19.11■□□□□ 0.65
CKS1B-202ENST00000368436 PRDM1O75626 825 aa19.11■□□□□ 0.65
CKS1B-202ENST00000368436 ZNF865P0CJ78 1059 aaPredicted RBP19.11■□□□□ 0.65
CKS1B-202ENST00000368436 ADCYAP1R1P41586 468 aa19.11■□□□□ 0.65
CKS1B-202ENST00000368436 DEFB123Q8N688 67 aa19.11■□□□□ 0.65
CKS1B-202ENST00000368436 OTUD7AQ8TE49 926 aaPredicted RBP19.11■□□□□ 0.65
CKS1B-202ENST00000368436 CEP95Q96GE4 821 aa19.11■□□□□ 0.65
CKS1B-202ENST00000368436 SEC62Q99442 399 aaKnown RBP19.11■□□□□ 0.65
CKS1B-202ENST00000368436 MTMR4Q9NYA4 1195 aa19.11■□□□□ 0.65
CKS1B-202ENST00000368436 PRKAG2Q9UGJ0 569 aa19.11■□□□□ 0.65
CKS1B-202ENST00000368436 RIPK3Q9Y572 518 aa19.11■□□□□ 0.65
CKS1B-202ENST00000368436 PLIN4Q96Q06 1357 aa19.1■□□□□ 0.65
CKS1B-202ENST00000368436 DNAJC25-GNG10A0A024R161 153 aa19.1■□□□□ 0.65
CKS1B-202ENST00000368436 RARBP10826 455 aa19.1■□□□□ 0.65
CKS1B-202ENST00000368436 TAL1P17542 331 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms