RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MKRN2Q9H000 416 aaKnown RBP8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 PRDM10Q9NQV6 1147 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 PTCH2Q9Y6C5 1203 aa8.09□□□□□ -1.11
RNU4-39P-201ENST00000362455 KIAA0586Q9BVV6 1533 aa8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 FAM95CA0A1B0GW59 222 aa8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 CBFA2T2O43439 604 aa8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 NAT2P11245 290 aa8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 RASSF7Q02833 373 aa8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 SV2CQ496J9 727 aa8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 NBPF12Q5TAG4 269 aaPredicted RBP8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 HEATR6Q6AI08 1181 aaKnown RBP8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 FAM20CQ8IXL6 584 aa8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 KIF13AQ9H1H9 1805 aa8.08□□□□□ -1.12
RNU4-39P-201ENST00000362455 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 DIP2BQ9P265 1576 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 PTPRGP23470 1445 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 IQCA1LA6NCM1 817 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 FAM153BP0C7A2 387 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 ETV3P41162 512 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 RNF4P78317 190 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 TOP6BLQ8N6T0 577 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 VWCEQ96DN2 955 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 APBA2Q99767 749 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 KLHL25Q9H0H3 589 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 KCNF1Q9H3M0 494 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 C1GALT1Q9NS00 363 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 RUSC2Q8N2Y8 1516 aa8.07□□□□□ -1.12
RNU4-39P-201ENST00000362455 TTBK1Q5TCY1 1321 aaPredicted RBP8.06□□□□□ -1.12
RNU4-39P-201ENST00000362455 ADCY3O60266 1144 aa8.06□□□□□ -1.12
RNU4-39P-201ENST00000362455 NFKBIBQ15653 356 aa8.06□□□□□ -1.12
RNU4-39P-201ENST00000362455 LRRC47Q8N1G4 583 aaKnown RBP8.06□□□□□ -1.12
RNU4-39P-201ENST00000362455 FGD4Q96M96 766 aa8.06□□□□□ -1.12
RNU4-39P-201ENST00000362455 APEX2Q9UBZ4 518 aa8.06□□□□□ -1.12
RNU4-39P-201ENST00000362455 ZNF451Q9Y4E5 1061 aa8.06□□□□□ -1.12
RNU4-39P-201ENST00000362455 AGRPO00253 132 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 SHOXO15266 292 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 AUHQ13825 339 aaKnown RBP8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 ANKRD39Q53RE8 183 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 PAOXQ6QHF9 649 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 BEND4Q6ZU67 534 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 C16orf86Q6ZW13 317 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 C7orf61Q8IZ16 206 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 TMEM151AQ8N4L1 468 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 ZBTB38Q8NAP3 1195 aaPredicted RBP8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 RNF141Q8WVD5 230 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 SGSM3Q96HU1 749 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 ASPNQ9BXN1 380 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 GBP3Q9H0R5 595 aa8.05□□□□□ -1.12
RNU4-39P-201ENST00000362455 A0A1W2PQU0 124 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 RBAK-RBAKDNI3L0D1 243 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 DHX15O43143 795 aaKnown RBP8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 GDF11O95390 407 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 EOMESO95936 686 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 HSP90B1P14625 803 aaKnown RBP8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 CD247P20963 164 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 CHRNA4P43681 627 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 GSK3AP49840 483 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 ADAT2Q7Z6V5 191 aaKnown RBP8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 KIAA0907Q7Z7F0 614 aaPredicted RBP8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 ZNF513Q8N8E2 541 aaPredicted RBP8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 ZSWIM2Q8NEG5 633 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 PPP1R14AQ96A00 147 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 FBXL18Q96ME1 805 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 DUSP23Q9BVJ7 150 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 CWC22Q9HCG8 908 aaKnown RBP8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 LRP2BPQ9P2M1 347 aa8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 TPX2Q9ULW0 747 aaKnown RBP8.04□□□□□ -1.12
RNU4-39P-201ENST00000362455 CARMIL1Q5VZK9 1371 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 LEFTY1O75610 366 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 LONRF2Q1L5Z9 754 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 TKFCQ3LXA3 575 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 TMEM67Q5HYA8 995 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 CD163Q86VB7 1156 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 LRRN4CLQ8ND94 238 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 SSBP4Q9BWG4 385 aaPredicted RBP8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 LGR4Q9BXB1 951 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 GP6Q9HCN6 339 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 ARHGEF4Q9NR80 690 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 WHRNQ9P202 907 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 ASXL2Q76L83 1435 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 CNTNAP4Q9C0A0 1308 aa8.03□□□□□ -1.12
RNU4-39P-201ENST00000362455 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 C1QTNF9BB2RNN3 333 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 LRRN2O75325 713 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 ASMTLO95671 621 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 ITGAVP06756 1048 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 FAM87AP0C7U9 286 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 NBPF9Q3BBW0 867 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 ZNF227Q86WZ6 799 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 CLEC10AQ8IUN9 316 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 SLC26A8Q96RN1 970 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 SLKQ9H2G2 1235 aaPredicted RBP8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 FBXL21Q9UKT6 434 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 SUGT1Q9Y2Z0 365 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 PCDHB12Q9Y5F1 795 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 KIF27Q86VH2 1401 aa8.02□□□□□ -1.13
RNU4-39P-201ENST00000362455 PPM1BO75688 479 aa8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 HMGB1P09429 215 aaKnown RBP8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 ITGA4P13612 1032 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms