RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 DPP9Q86TI2 863 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 TDHQ8IZJ6 230 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 KBTBD3Q8NAB2 608 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 MAML3Q96JK9 1138 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 SENP6Q9GZR1 1112 aaPredicted RBP19.07■□□□□ 0.64
PDGFA-201ENST00000354513 MROH8Q9H579 483 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 DCTPP1Q9H773 170 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 SH2D4AQ9H788 454 aa19.07■□□□□ 0.64
PDGFA-201ENST00000354513 ARPP21Q9UBL0 812 aaPredicted RBP19.07■□□□□ 0.64
PDGFA-201ENST00000354513 LCTP09848 1927 aa19.06■□□□□ 0.64
PDGFA-201ENST00000354513 PLS1Q14651 629 aa19.06■□□□□ 0.64
PDGFA-201ENST00000354513 SBK1Q52WX2 424 aa19.06■□□□□ 0.64
PDGFA-201ENST00000354513 PRAMEF19Q5SWL8 479 aa19.06■□□□□ 0.64
PDGFA-201ENST00000354513 GJC2Q5T442 439 aaPredicted RBP19.06■□□□□ 0.64
PDGFA-201ENST00000354513 ZSCAN25Q6NSZ9 544 aa19.06■□□□□ 0.64
PDGFA-201ENST00000354513 NCAPG2Q86XI2 1143 aa19.06■□□□□ 0.64
PDGFA-201ENST00000354513 ABRAQ8N0Z2 381 aa19.06■□□□□ 0.64
PDGFA-201ENST00000354513 ZNF214Q9UL59 606 aaPredicted RBP19.06■□□□□ 0.64
PDGFA-201ENST00000354513 MDM2Q00987 491 aaPredicted RBP19.05■□□□□ 0.64
PDGFA-201ENST00000354513 FAM83BQ5T0W9 1011 aa19.05■□□□□ 0.64
PDGFA-201ENST00000354513 SAMD1Q6SPF0 538 aaPredicted RBP19.05■□□□□ 0.64
PDGFA-201ENST00000354513 UBE2OQ9C0C9 1292 aaKnown RBP19.05■□□□□ 0.64
PDGFA-201ENST00000354513 KANSL2Q9H9L4 492 aa19.05■□□□□ 0.64
PDGFA-201ENST00000354513 IGKV6D-41A0A0C4DH26 115 aa19.04■□□□□ 0.64
PDGFA-201ENST00000354513 M0R2C6 588 aa19.04■□□□□ 0.64
PDGFA-201ENST00000354513 SEPT4O43236 478 aa19.04■□□□□ 0.64
PDGFA-201ENST00000354513 ATN1P54259 1190 aaPredicted RBP19.04■□□□□ 0.64
PDGFA-201ENST00000354513 Q7L0L9 218 aa19.04■□□□□ 0.64
PDGFA-201ENST00000354513 RIOX2Q8IUF8 465 aa19.04■□□□□ 0.64
PDGFA-201ENST00000354513 AMOTL1Q8IY63 956 aa19.04■□□□□ 0.64
PDGFA-201ENST00000354513 APPBP2Q92624 585 aa19.04■□□□□ 0.64
PDGFA-201ENST00000354513 NUP88Q99567 741 aaPredicted RBP19.04■□□□□ 0.64
PDGFA-201ENST00000354513 PPP1R9AQ9ULJ8 1098 aa19.04■□□□□ 0.64
PDGFA-201ENST00000354513 VWA5AO00534 786 aa19.03■□□□□ 0.64
PDGFA-201ENST00000354513 RTP1P59025 263 aa19.03■□□□□ 0.64
PDGFA-201ENST00000354513 FAM47AQ5JRC9 791 aa19.03■□□□□ 0.64
PDGFA-201ENST00000354513 GPR153Q6NV75 609 aa19.03■□□□□ 0.64
PDGFA-201ENST00000354513 STK11IPQ8N1F8 1099 aa19.03■□□□□ 0.64
PDGFA-201ENST00000354513 PGK2P07205 417 aa19.02■□□□□ 0.64
PDGFA-201ENST00000354513 SNX17Q15036 470 aa19.02■□□□□ 0.64
PDGFA-201ENST00000354513 ZNF792Q3KQV3 632 aa19.02■□□□□ 0.64
PDGFA-201ENST00000354513 GIMAP6Q6P9H5 292 aa19.02■□□□□ 0.64
PDGFA-201ENST00000354513 DDRGK1Q96HY6 314 aa19.02■□□□□ 0.64
PDGFA-201ENST00000354513 YTHDC1Q96MU7 727 aaKnown RBP19.02■□□□□ 0.64
PDGFA-201ENST00000354513 RNF113AO15541 343 aaKnown RBP19.01■□□□□ 0.63
PDGFA-201ENST00000354513 GPAA1O43292 621 aa19.01■□□□□ 0.63
PDGFA-201ENST00000354513 SLC25A27O95847 323 aa19.01■□□□□ 0.63
PDGFA-201ENST00000354513 FCER1AP12319 257 aa19.01■□□□□ 0.63
PDGFA-201ENST00000354513 TAL1P17542 331 aaPredicted RBP19.01■□□□□ 0.63
PDGFA-201ENST00000354513 PI4K2BQ8TCG2 481 aa19.01■□□□□ 0.63
PDGFA-201ENST00000354513 OTUD7AQ8TE49 926 aaPredicted RBP19.01■□□□□ 0.63
PDGFA-201ENST00000354513 MMP19Q99542 508 aa19.01■□□□□ 0.63
PDGFA-201ENST00000354513 GOPCQ9HD26 462 aa19.01■□□□□ 0.63
PDGFA-201ENST00000354513 PCDHB15Q9Y5E8 787 aa19.01■□□□□ 0.63
PDGFA-201ENST00000354513 PLIN4Q96Q06 1357 aa19.01■□□□□ 0.63
PDGFA-201ENST00000354513 NDUFB10O96000 172 aa19■□□□□ 0.63
PDGFA-201ENST00000354513 LRRC41Q15345 812 aa19■□□□□ 0.63
PDGFA-201ENST00000354513 SLC39A5Q6ZMH5 540 aa19■□□□□ 0.63
PDGFA-201ENST00000354513 SEC62Q99442 399 aaKnown RBP19■□□□□ 0.63
PDGFA-201ENST00000354513 NYAP2Q9P242 653 aa19■□□□□ 0.63
PDGFA-201ENST00000354513 MINDY4BA8MYZ0 360 aa19■□□□□ 0.63
PDGFA-201ENST00000354513 STAT3P40763 770 aa19■□□□□ 0.63
PDGFA-201ENST00000354513 DEFB123Q8N688 67 aa19■□□□□ 0.63
PDGFA-201ENST00000354513 ARRDC4Q8NCT1 418 aa19■□□□□ 0.63
PDGFA-201ENST00000354513 RIPK3Q9Y572 518 aa19■□□□□ 0.63
PDGFA-201ENST00000354513 SALL3Q9BXA9 1300 aa18.99■□□□□ 0.63
PDGFA-201ENST00000354513 F5H6K3 240 aa18.99■□□□□ 0.63
PDGFA-201ENST00000354513 ZNF865P0CJ78 1059 aaPredicted RBP18.99■□□□□ 0.63
PDGFA-201ENST00000354513 KLRC3Q07444 240 aa18.99■□□□□ 0.63
PDGFA-201ENST00000354513 TRIM60Q495X7 471 aa18.99■□□□□ 0.63
PDGFA-201ENST00000354513 LENG1Q96BZ8 264 aaPredicted RBP18.99■□□□□ 0.63
PDGFA-201ENST00000354513 SLF1Q9BQI6 1058 aa18.99■□□□□ 0.63
PDGFA-201ENST00000354513 TINF2Q9BSI4 451 aa18.99■□□□□ 0.63
PDGFA-201ENST00000354513 MTMR10Q9NXD2 777 aa18.99■□□□□ 0.63
PDGFA-201ENST00000354513 SLC5A4Q9NY91 659 aa18.99■□□□□ 0.63
PDGFA-201ENST00000354513 ATP11BQ9Y2G3 1177 aa18.99■□□□□ 0.63
PDGFA-201ENST00000354513 KBTBD13C9JR72 458 aa18.98■□□□□ 0.63
PDGFA-201ENST00000354513 FOXP2O15409 715 aa18.98■□□□□ 0.63
PDGFA-201ENST00000354513 RAD21O60216 631 aa18.98■□□□□ 0.63
PDGFA-201ENST00000354513 PRDM1O75626 825 aa18.98■□□□□ 0.63
PDGFA-201ENST00000354513 ADCYAP1R1P41586 468 aa18.98■□□□□ 0.63
PDGFA-201ENST00000354513 CEP95Q96GE4 821 aa18.98■□□□□ 0.63
PDGFA-201ENST00000354513 FGD4Q96M96 766 aa18.98■□□□□ 0.63
PDGFA-201ENST00000354513 PDLIM7Q9NR12 457 aa18.98■□□□□ 0.63
PDGFA-201ENST00000354513 DIS3Q9Y2L1 958 aaKnown RBP18.98■□□□□ 0.63
PDGFA-201ENST00000354513 EYSQ5T1H1 3165 aa18.97■□□□□ 0.63
PDGFA-201ENST00000354513 DNAJC25-GNG10A0A024R161 153 aa18.97■□□□□ 0.63
PDGFA-201ENST00000354513 ZFYP08048 801 aaPredicted RBP18.97■□□□□ 0.63
PDGFA-201ENST00000354513 SH3RF1Q7Z6J0 888 aa18.97■□□□□ 0.63
PDGFA-201ENST00000354513 IFNL3Q8IZI9 196 aa18.97■□□□□ 0.63
PDGFA-201ENST00000354513 FERMT2Q96AC1 680 aa18.97■□□□□ 0.63
PDGFA-201ENST00000354513 GPATCH3Q96I76 525 aa18.97■□□□□ 0.63
PDGFA-201ENST00000354513 MKNK2Q9HBH9 465 aa18.97■□□□□ 0.63
PDGFA-201ENST00000354513 NRBP1Q9UHY1 535 aa18.97■□□□□ 0.63
PDGFA-201ENST00000354513 PHF24Q9UPV7 400 aa18.97■□□□□ 0.63
PDGFA-201ENST00000354513 TTC41PQ6P2S7 1318 aa18.96■□□□□ 0.63
PDGFA-201ENST00000354513 TDO2P48775 406 aa18.96■□□□□ 0.63
PDGFA-201ENST00000354513 KCTD2Q14681 263 aa18.96■□□□□ 0.63
PDGFA-201ENST00000354513 SNRNP48Q6IEG0 339 aaKnown RBP18.96■□□□□ 0.63
PDGFA-201ENST00000354513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms