RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 TOP1P11387 765 aaKnown RBP13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 BMP3P12645 472 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 GRK4P32298 578 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 FLT3LGP49771 235 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 IRF5Q13568 498 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 PLS1Q14651 629 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 Q3C1V9 767 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 WDR78Q5VTH9 848 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 TBC1D10CQ8IV04 446 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 PRPF38AQ8NAV1 312 aaKnown RBP13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 SLAIN1Q8ND83 568 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 SOCS4Q8WXH5 440 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 ARMC5Q96C12 935 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 NUDT12Q9BQG2 462 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 SLF1Q9BQI6 1058 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 FEM1BQ9UK73 627 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 PPP1R9AQ9ULJ8 1098 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 IVNS1ABPQ9Y6Y0 642 aa13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 GREB1LQ9C091 1923 aaPredicted RBP13.34□□□□□ -0.27
SLC28A1-202ENST00000338602 DLL1O00548 723 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 ZBED4O75132 1171 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 CDC45O75419 566 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 COPB2P35606 906 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 SLC1A4P43007 532 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 UBXN2AP68543 259 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 IKQ13123 557 aaPredicted RBP13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 PLEKHH3Q7Z736 793 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 PXYLP1Q8TE99 480 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 CHURC1Q8WUH1 139 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 ATG4CQ96DT6 458 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 GMCL1Q96IK5 515 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 ESYT1Q9BSJ8 1104 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 SPATC1LQ9H0A9 340 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 IL17RBQ9NRM6 502 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 BTBD7Q9P203 1132 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 GABRQQ9UN88 632 aa13.33□□□□□ -0.27
SLC28A1-202ENST00000338602 ADCY3O60266 1144 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 NMT2O60551 498 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 KDM4AO75164 1064 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 CNMDO75829 334 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 SLC25A27O95847 323 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 FDX1P10109 184 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 PTH1RQ03431 593 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 GPR142Q7Z601 462 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 FAM160B2Q86V87 743 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 TRMT44Q8IYL2 757 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 SHCBP1Q8NEM2 672 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 MAP4K1Q92918 833 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 NUP88Q99567 741 aaPredicted RBP13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 UBAC1Q9BSL1 405 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 NBPF3Q9H094 633 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 PORCNQ9H237 461 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 IL25Q9H293 177 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 MROH8Q9H579 483 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 FBXO28Q9NVF7 368 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 TACC3Q9Y6A5 838 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 MGAMO43451 1857 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 B4E1Z4 1266 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 VWA5AO00534 786 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 STRNO43815 780 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 PEX10O60683 326 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 MCCP23508 829 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 RGS2P41220 211 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 NOVP48745 357 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 FXR1P51114 621 aaKnown RBP eCLIP13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 STAT2P52630 851 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 RCSD1Q6JBY9 416 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 RALYLQ86SE5 291 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 SKAP1Q86WV1 359 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 DGKHQ86XP1 1220 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 SH3TC2Q8TF17 1288 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 DCAF4Q8WV16 495 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 KIFC2Q96AC6 838 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 ZNF333Q96JL9 665 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 TMEM47Q9BQJ4 181 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 ANO2Q9NQ90 1003 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 ADAMTS5Q9UNA0 930 aa13.32□□□□□ -0.28
SLC28A1-202ENST00000338602 NEDD4P46934 1319 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 SLC15A5A6NIM6 579 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 TMEM232C9JQI7 657 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 XRCC5P13010 732 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 STAT3P40763 770 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 CCDC96Q2M329 555 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 NCAPG2Q86XI2 1143 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 ZSCAN10Q96SZ4 725 aaPredicted RBP13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 MOV10L1Q9BXT6 1211 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 SLC5A4Q9NY91 659 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 ZSWIM5Q9P217 1185 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 GJD2Q9UKL4 321 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 MTMR7Q9Y216 660 aa13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 RBM8AQ9Y5S9 174 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-202ENST00000338602 ERICH2A1L162 156 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 PLA2G6O60733 806 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 CYP21A2P08686 494 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 ERCC3P19447 782 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 CYP2B6P20813 491 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 PTPREP23469 700 aa13.3□□□□□ -0.28
SLC28A1-202ENST00000338602 MAP2K5Q13163 448 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms