RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PI4KBQ9UBF8 816 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 PAXBP1Q9Y5B6 917 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 MYO3AQ8NEV4 1616 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 MCF2L2Q86YR7 1114 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 DIP2AQ14689 1571 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 AKR1B15C9JRZ8 316 aaPredicted RBP15.32■□□□□ 0.04
NPC1-201ENST00000269228 DNM2P50570 870 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 ASPRV1Q53RT3 343 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 MCTP2Q6DN12 878 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 GALNT17Q6IS24 598 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 ZNF526Q8TF50 670 aaPredicted RBP15.32■□□□□ 0.04
NPC1-201ENST00000269228 SOS2Q07890 1332 aaPredicted RBP15.32■□□□□ 0.04
NPC1-201ENST00000269228 OR52Z1P0C646 297 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 CACNB3P54284 484 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 LMBR1Q8WVP7 490 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 CBX8Q9HC52 389 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 PTPRUQ92729 1446 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 POTEB2H3BUK9 544 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 EXOC3O60645 756 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 FANCCQ00597 558 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 SELENOOQ9BVL4 669 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 ZKSCAN5Q9Y2L8 839 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 PRPHP41219 470 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 TRIM6Q9C030 488 aaPredicted RBP15.31■□□□□ 0.04
NPC1-201ENST00000269228 DDX25Q9UHL0 483 aaKnown RBP15.31■□□□□ 0.04
NPC1-201ENST00000269228 CYP2E1P05181 493 aaPredicted RBP15.31■□□□□ 0.04
NPC1-201ENST00000269228 CKAP4Q07065 602 aaKnown RBP15.31■□□□□ 0.04
NPC1-201ENST00000269228 PLA2G4DQ86XP0 818 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 ZNF354CQ86Y25 554 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 TRMT44Q8IYL2 757 aaKnown RBP15.31■□□□□ 0.04
NPC1-201ENST00000269228 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.31■□□□□ 0.04
NPC1-201ENST00000269228 STRBPQ96SI9 672 aaKnown RBP15.31■□□□□ 0.04
NPC1-201ENST00000269228 CD209Q9NNX6 404 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 SLC5A4Q9NY91 659 aa15.31■□□□□ 0.04
NPC1-201ENST00000269228 CTAGE15A4D2H0 777 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 KIAA0754O94854 1291 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 CTAGE8P0CG41 777 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 CTAGE6Q86UF2 777 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 CTAGE4Q8IX94 777 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 RNF26Q9BY78 433 aaPredicted RBP15.3■□□□□ 0.04
NPC1-201ENST00000269228 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.3■□□□□ 0.04
NPC1-201ENST00000269228 RIMS1Q86UR5 1692 aaKnown RBP15.3■□□□□ 0.04
NPC1-201ENST00000269228 TRPC3Q13507 836 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 GPBP1Q86WP2 473 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 RASGRP4Q8TDF6 673 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 NELFBQ8WX92 580 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 CLIC6Q96NY7 704 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 TAB2Q9NYJ8 693 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 LMAN1P49257 510 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 PTGDRQ13258 359 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 BAG1Q99933 345 aaPredicted RBP15.3■□□□□ 0.04
NPC1-201ENST00000269228 KDM3AQ9Y4C1 1321 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 MSANTD4Q8NCY6 345 aa15.3■□□□□ 0.04
NPC1-201ENST00000269228 ZC3H13Q5T200 1668 aaKnown RBP15.29■□□□□ 0.04
NPC1-201ENST00000269228 CTAGE9A4FU28 777 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 EZRP15311 586 aaKnown RBP15.29■□□□□ 0.04
NPC1-201ENST00000269228 USP17L2Q6R6M4 530 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 OTUD6AQ7L8S5 288 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 DHX37Q8IY37 1157 aaKnown RBP15.29■□□□□ 0.04
NPC1-201ENST00000269228 NSUN7Q8NE18 718 aaKnown RBP15.29■□□□□ 0.04
NPC1-201ENST00000269228 SH3RF3Q8TEJ3 882 aaPredicted RBP15.29■□□□□ 0.04
NPC1-201ENST00000269228 CHAMP1Q96JM3 812 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 UBXN2AP68543 259 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 SH2B2O14492 632 aaPredicted RBP15.29■□□□□ 0.04
NPC1-201ENST00000269228 BMP3P12645 472 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 CDK8P49336 464 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 PIGSQ96S52 555 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 CPDO75976 1380 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 CCDC50Q8IVM0 306 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 SLFN12Q8IYM2 578 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 CLIC4Q9Y696 253 aa15.29■□□□□ 0.04
NPC1-201ENST00000269228 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 CD2BP2O95400 341 aaKnown RBP15.28■□□□□ 0.04
NPC1-201ENST00000269228 FMNL1O95466 1100 aaPredicted RBP15.28■□□□□ 0.04
NPC1-201ENST00000269228 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
NPC1-201ENST00000269228 PLCB3Q01970 1234 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 TRIM28Q13263 835 aaKnown RBP15.28■□□□□ 0.04
NPC1-201ENST00000269228 SMC1AQ14683 1233 aaKnown RBP15.28■□□□□ 0.04
NPC1-201ENST00000269228 ZNF569Q5MCW4 686 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 CDAN1Q8IWY9 1227 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 PNMA2Q9UL42 364 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 PCDHA7Q9UN72 937 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 NR1I2O75469 434 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 FOXO4P98177 505 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 AOC3Q16853 763 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 TMEM63CQ9P1W3 806 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 CGNQ9P2M7 1197 aaKnown RBP15.28■□□□□ 0.04
NPC1-201ENST00000269228 KIF4AO95239 1232 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 GPIHBP1Q8IV16 184 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 RDH13Q8NBN7 331 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 TRPC6Q9Y210 931 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 CEP170BQ9Y4F5 1589 aaPredicted RBP15.28■□□□□ 0.04
NPC1-201ENST00000269228 USP14P54578 494 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 MAATS1Q7Z4T9 603 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 METTL13Q8N6R0 699 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 CAPZA3Q96KX2 299 aa15.28■□□□□ 0.04
NPC1-201ENST00000269228 ECE2O60344 883 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 MYZAPP0CAP1 466 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 CRKP46108 304 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 CYP4A11Q02928 519 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms