RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Ccdc84Q4VA36 332 aaKnown RBP21.8■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Atp13a3Q5XF89 1219 aa21.8■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Tbc1d5Q80XQ2 815 aa21.8■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Ranbp6Q8BIV3 1105 aa21.8■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Slc45a1Q8BIV7 751 aa21.8■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Armc6Q8BNU0 468 aa21.8■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Rtn1Q8K0T0 780 aa21.8■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Mov10l1Q99MV5 1187 aa21.8■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Arhgef25Q9CWR0 618 aa21.8■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Pdcd6ipQ9WU78 869 aaKnown RBP21.8■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Sall1Q9ER74 1322 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 PatjQ63ZW7 1834 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Fndc3c1Q6DFV6 1356 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 ArxO35085 564 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Mboat4P0C7A3 435 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 LdhbP16125 334 aaKnown RBP21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 OatP29758 439 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Foxn1Q61575 648 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Dync1li2Q6PDL0 492 aaKnown RBP21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Ccp110Q7TSH4 1004 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Epha10Q8BYG9 1007 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 MslnlQ8C160 685 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Usp33Q8R5K2 909 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Itm2cQ91VK4 269 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 BaatQ91X34 420 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 SerhlQ9EPB5 311 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Zbtb12Q9Z150 459 aa21.79■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Tph1P17532 447 aa21.78■■□□□ 1.08
Scn1b-203ENSMUST00000211945 NefhP19246 1090 aa21.78■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Slc16a10Q3U9N9 512 aa21.78■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Galnt17Q7TT15 598 aa21.78■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Fbxo28Q8BIG4 368 aa21.78■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Ccdc178Q8CDV0 866 aa21.78■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Gripap1Q8VD04 806 aa21.78■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Ubac1Q8VDI7 409 aa21.78■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Rnf181Q9CY62 165 aa21.78■■□□□ 1.08
Scn1b-203ENSMUST00000211945 A0A1Y7VML8 143 aa21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Ppp1r9aH3BJD6 1292 aa21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Terf2O35144 541 aa21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Cplx2P84086 134 aa21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Armc2Q3URY6 854 aa21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Mdh1bQ5F204 500 aa21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Vmn1r209Q5NC97 312 aa21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Triml1Q8BVP1 470 aa21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Iffo2Q8R2V2 512 aa21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Prpf3Q922U1 683 aaKnown RBP21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 Gpaa1Q9WTK3 621 aa21.77■■□□□ 1.08
Scn1b-203ENSMUST00000211945 DaxxO35613 739 aa21.76■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Rnf216P58283 853 aa21.76■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Limch1Q3UH68 1057 aa21.76■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Cdkl5Q3UTQ8 938 aa21.76■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Fstl1Q62356 306 aa21.76■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Sp4Q62445 782 aa21.76■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Gprasp2Q8BUY8 826 aa21.76■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Dnai1Q8C0M8 701 aa21.76■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Tsr2Q8C8T8 191 aa21.76■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Nr3c2Q8VII8 978 aa21.76■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Nfil3O08750 462 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Rgs9O54828 675 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Il13ra2O88786 383 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Hoxc10P31257 342 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Pls1Q3V0K9 630 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Trim59Q922Y2 403 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Cep89Q9CZX2 791 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Tjp3Q9QXY1 905 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Prpmp5E9PXN1 296 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Flot1O08917 428 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Mx1P09922 631 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Olfm4Q3UZZ4 505 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Ptger2Q62053 362 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Supt20hQ7TT00 530 aaKnown RBP21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Senp7Q8BUH8 1037 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Mbtps2Q8CHX6 515 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Tdrd3Q91W18 743 aaKnown RBP21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 HlcsQ920N2 722 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 4921524L21RikQ9D5T2 438 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Stk39Q9Z1W9 556 aa21.75■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Ripor3A1L3T7 938 aa21.74■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Rfx1P48377 963 aa21.74■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Gba2Q69ZF3 918 aa21.74■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Adam39Q7M762 756 aa21.74■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Morc2bQ8C5W4 1022 aa21.74■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Ifi202Q9R002 445 aa21.74■■□□□ 1.07
Scn1b-203ENSMUST00000211945 BC048507Q80ZS7 89 aa21.73■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Zhx2Q8C0C0 836 aaKnown RBP21.73■■□□□ 1.07
Scn1b-203ENSMUST00000211945 RadxQ8C779 850 aa21.73■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Mknk2Q8CDB0 459 aa21.73■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Depdc1aQ8CIG0 804 aa21.73■■□□□ 1.07
Scn1b-203ENSMUST00000211945 DaglbQ91WC9 669 aa21.73■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Mrpl11Q9CQF0 192 aaKnown RBP21.73■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Ubiad1Q9DC60 336 aa21.73■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Psmd10Q9Z2X2 231 aa21.73■■□□□ 1.07
Scn1b-203ENSMUST00000211945 BcrQ6PAJ1 1270 aa21.72■■□□□ 1.07
Scn1b-203ENSMUST00000211945 SltmQ8CH25 1031 aaKnown RBP21.72■■□□□ 1.07
Scn1b-203ENSMUST00000211945 DnerQ8JZM4 737 aa21.72■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Fez1Q8K0X8 392 aa21.72■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Snap47Q8R570 413 aa21.72■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Oxnad1Q8VE38 311 aa21.72■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Pfkfb3A7UAK5 555 aa21.71■■□□□ 1.07
Scn1b-203ENSMUST00000211945 Eps15P42567 897 aa21.71■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms