RNA–Protein interactions for RNA: YPR052C

NHP6A, Transcript of High-mobility group (HMG) protein, yeast

Gene NHP6A, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP6A	YPR052C	MIH1	P23748	554 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	SEC14	P24280	304 aa	Known RBP	4.89	□□□□□ -1.63
NHP6A	YPR052C	RPC19	P28000	142 aa	Known RBP	4.89	□□□□□ -1.63
NHP6A	YPR052C	SMI1	P32566	505 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	SEC6	P32844	805 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	RIM2	P38127	377 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	RFC3	P38629	340 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	STN1	P38960	494 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	YJL206C	P39529	758 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	VAC8	P39968	578 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	EDC3	P39998	551 aa	Known RBP	4.89	□□□□□ -1.63
NHP6A	YPR052C	DPH1	P40487	425 aa	Known RBP	4.89	□□□□□ -1.63
NHP6A	YPR052C	CNN1	P43618	361 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	RPS10B	P46784	105 aa	Known RBP	4.89	□□□□□ -1.63
NHP6A	YPR052C	SNG1	P46950	547 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	VEL1	P53058	206 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	NNF2	P53253	936 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
NHP6A	YPR052C	TFB2	Q02939	513 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	YPL113C	Q02961	396 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	YMR209C	Q03648	457 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	BNA5	Q05979	453 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	RPS10A	Q08745	105 aa	Predicted RBP	4.89	□□□□□ -1.63
NHP6A	YPR052C	YOR387C	Q08910	206 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	LDB17	Q12342	491 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	KCS1	Q12494	1050 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	NOT5	Q12514	560 aa	Predicted RBP	4.89	□□□□□ -1.63
NHP6A	YPR052C	HIS1	P00498	297 aa	Known RBP	4.88	□□□□□ -1.63
NHP6A	YPR052C	ARD1	P07347	238 aa	Predicted RBP	4.88	□□□□□ -1.63
NHP6A	YPR052C	INO1	P11986	533 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	STE4	P18851	423 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	HSP60	P19882	572 aa	Known RBP	4.88	□□□□□ -1.63
NHP6A	YPR052C	PTP1	P25044	335 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	NPP1	P25353	742 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	ADY2	P25613	283 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	HRR25	P29295	494 aa	Known RBP	4.88	□□□□□ -1.63
NHP6A	YPR052C	HEM12	P32347	362 aa	Predicted RBP	4.88	□□□□□ -1.63
NHP6A	YPR052C	GDA1	P32621	518 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	PEX5	P35056	612 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	RRN3	P36070	627 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	RRP14	P36080	434 aa	Known RBP	4.88	□□□□□ -1.63
NHP6A	YPR052C	PHO89	P38361	574 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	WSC4	P38739	605 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	LTP1	P40347	161 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	YJL070C	P40361	888 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	FAR3	P46671	204 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	YJL132W	P47014	750 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	MAD3	P47074	515 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	MRX6	P48564	524 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	RNR4	P49723	345 aa	Known RBP	4.88	□□□□□ -1.63
NHP6A	YPR052C	GND2	P53319	492 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	SWS2	P53937	143 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	DOS2	P54858	310 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	UBP2	Q01476	1272 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	TRM82	Q03774	444 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	FMN1	Q03778	218 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	CDC123	Q05791	360 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	GRX8	Q05926	109 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	YFT2	Q06676	274 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	SWC7	Q06707	132 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	YLR012C	Q07927	99 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	LCB4	Q12246	624 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	YMR030W-A	Q3E760	96 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	RGS2	Q99188	309 aa		4.88	□□□□□ -1.63
NHP6A	YPR052C	COX5A	P00424	153 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	RNA1	P11745	407 aa	Known RBP	4.87	□□□□□ -1.63
NHP6A	YPR052C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
NHP6A	YPR052C	EXO70	P19658	623 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	HEM3	P28789	327 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	NDI1	P32340	513 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	RIM1	P32445	135 aa	Known RBP	4.87	□□□□□ -1.63
NHP6A	YPR052C	TOA1	P32773	286 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	MRS6	P32864	603 aa	Known RBP	4.87	□□□□□ -1.63
NHP6A	YPR052C	BEM3	P32873	1128 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	DCW1	P36091	449 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	SRP68	P38687	599 aa	Known RBP	4.87	□□□□□ -1.63
NHP6A	YPR052C	YHI9	P38765	294 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	PTI1	P39927	425 aa	Predicted RBP	4.87	□□□□□ -1.63
NHP6A	YPR052C	KTR7	P40504	517 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	UBP6	P43593	499 aa	Known RBP	4.87	□□□□□ -1.63
NHP6A	YPR052C	NPY1	P53164	384 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	BUD32	P53323	261 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	RCF2	P53721	224 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	YNR021W	P53723	404 aa	Known RBP	4.87	□□□□□ -1.63
NHP6A	YPR052C	AQR1	P53943	586 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	RLI1	Q03195	608 aa	Known RBP	4.87	□□□□□ -1.63
NHP6A	YPR052C	ENT5	Q03769	411 aa	Known RBP	4.87	□□□□□ -1.63
NHP6A	YPR052C	INP2	Q03824	705 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	TVP15	Q03860	143 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	TAF11	Q04226	346 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	RSC2	Q06488	889 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	ADY3	Q07732	790 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	THI73	Q07904	523 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	BUD20	Q08004	166 aa	Predicted RBP	4.87	□□□□□ -1.63
NHP6A	YPR052C	RSB1	Q08417	382 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	NDD1	Q08887	554 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	YOR389W	Q08912	624 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	YPL278C	Q08990	100 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	GNT1	Q12096	491 aa		4.87	□□□□□ -1.63
NHP6A	YPR052C	APC9	Q12107	265 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms