RNA–Protein interactions for RNA: YOR043W

WHI2, Transcript of Protein required for full activation of the general stress response, yeast

Gene WHI2, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI2	YOR043W	TAF11	Q04226	346 aa		6.12	□□□□□ -1.43
WHI2	YOR043W	YLR177W	Q06251	628 aa		6.12	□□□□□ -1.43
WHI2	YOR043W	BSP1	Q06604	576 aa		6.12	□□□□□ -1.43
WHI2	YOR043W	LDB18	Q07887	179 aa		6.12	□□□□□ -1.43
WHI2	YOR043W	YLR012C	Q07927	99 aa		6.12	□□□□□ -1.43
WHI2	YOR043W	APC9	Q12107	265 aa		6.12	□□□□□ -1.43
WHI2	YOR043W	CHS5	Q12114	671 aa	Known RBP	6.12	□□□□□ -1.43
WHI2	YOR043W	RAD3	P06839	778 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
WHI2	YOR043W	MTF1	P14908	341 aa	Known RBP	6.11	□□□□□ -1.43
WHI2	YOR043W	IDI1	P15496	288 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	SNT1	P25357	1226 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	URK1	P27515	501 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	BEM1	P29366	551 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	KAR9	P32526	644 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	BEM3	P32873	1128 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	SGE1	P33335	543 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	MRP21	P38175	177 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	MSC7	P38694	644 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	YHL041W	P38730	149 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	STN1	P38960	494 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	SEO1	P39709	593 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	UBP6	P43593	499 aa	Known RBP	6.11	□□□□□ -1.43
WHI2	YOR043W	TMA22	P47089	198 aa	Predicted RBP	6.11	□□□□□ -1.43
WHI2	YOR043W	YNR063W	P53749	607 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	NOP15	P53927	220 aa	Predicted RBP	6.11	□□□□□ -1.43
WHI2	YOR043W	NUP100	Q02629	959 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	RPN9	Q04062	393 aa	Known RBP	6.11	□□□□□ -1.43
WHI2	YOR043W	PEX15	Q08215	383 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	STB3	Q12427	513 aa		6.11	□□□□□ -1.43
WHI2	YOR043W	GLN4	P13188	809 aa	Known RBP	6.1	□□□□□ -1.43
WHI2	YOR043W	NSP1	P14907	823 aa	Known RBP	6.1	□□□□□ -1.43
WHI2	YOR043W	CLN1	P20437	546 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	AMD2	P22580	549 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	MSH2	P25847	964 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	TOA1	P32773	286 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	TFA2	P36145	328 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	RFC3	P38629	340 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	YHR182W	P38870	785 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	YIL161W	P40449	235 aa	Known RBP	6.1	□□□□□ -1.43
WHI2	YOR043W	UBP7	P40453	1071 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	CHS6	P40955	746 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	PSP1	P50896	841 aa	Known RBP	6.1	□□□□□ -1.43
WHI2	YOR043W	STR3	P53101	465 aa	Known RBP	6.1	□□□□□ -1.43
WHI2	YOR043W	NNF2	P53253	936 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	ATF2	P53296	535 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	IST1	P53843	298 aa	Predicted RBP	6.1	□□□□□ -1.43
WHI2	YOR043W	CSN9	Q03981	162 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	SYT1	Q06836	1226 aa		6.1	□□□□□ -1.43
WHI2	YOR043W	TMA46	Q12000	345 aa	Known RBP	6.1	□□□□□ -1.43
WHI2	YOR043W	NOT5	Q12514	560 aa	Predicted RBP	6.1	□□□□□ -1.43
WHI2	YOR043W	AI1	P03875	834 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	EXO70	P19658	623 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	MLS1	P30952	554 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	SSE1	P32589	693 aa	Known RBP	6.09	□□□□□ -1.43
WHI2	YOR043W	ASK1	P35734	292 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	MRPL40	P36534	297 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	ATG12	P38316	186 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	RGI2	P40188	164 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	IST3	P40565	148 aa	Predicted RBP	6.09	□□□□□ -1.43
WHI2	YOR043W	YFL066C	P43538	392 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	ARC1	P46672	376 aa	Known RBP	6.09	□□□□□ -1.43
WHI2	YOR043W	AMA1	P50082	593 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	TEL2	P53038	688 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	MRM2	P53123	320 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	EFM6	P53970	246 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	YMR155W	Q03795	547 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	TVP15	Q03860	143 aa		6.09	□□□□□ -1.43
WHI2	YOR043W	HPT1	Q04178	221 aa	Known RBP	6.09	□□□□□ -1.43
WHI2	YOR043W	RTN1	Q04947	295 aa	Known RBP	6.09	□□□□□ -1.43
WHI2	YOR043W	YPR089W	O13585	888 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	RNA1	P11745	407 aa	Known RBP	6.09	□□□□□ -1.44
WHI2	YOR043W	SST2	P11972	698 aa	Known RBP	6.09	□□□□□ -1.44
WHI2	YOR043W	GAL11	P19659	1081 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	AAT2	P23542	418 aa	Known RBP	6.09	□□□□□ -1.44
WHI2	YOR043W	PPH22	P23595	377 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	VAN1	P23642	535 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	MIH1	P23748	554 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	YSP3	P25036	478 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	RBK1	P25332	333 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	DCC1	P25559	380 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	PEX34	P25584	144 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	ISF1	P32488	338 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	STE13	P33894	931 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	POL12	P38121	705 aa	Predicted RBP	6.09	□□□□□ -1.44
WHI2	YOR043W	APM3	P38153	483 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	STB5	P38699	743 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	SHU2	P38957	223 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	SEC31	P38968	1273 aa	Known RBP	6.09	□□□□□ -1.44
WHI2	YOR043W	ECM1	P39715	212 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	SEC28	P40509	296 aa	Known RBP	6.09	□□□□□ -1.44
WHI2	YOR043W	SAP4	P53036	818 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	PEX8	P53248	589 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	ADE12	P80210	433 aa	Known RBP	6.09	□□□□□ -1.44
WHI2	YOR043W	PET117	Q02771	107 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	TFB2	Q02939	513 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	YMR206W	Q03695	313 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	FMN1	Q03778	218 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	YDR109C	Q04585	715 aa		6.09	□□□□□ -1.44
WHI2	YOR043W	CRN1	Q06440	651 aa		6.09	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms