RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C IPI3P53877 555 aa3.02□□□□□ -1.93
NMD2YHR077C FMP30Q02883 468 aa3.02□□□□□ -1.93
NMD2YHR077C CSN9Q03981 162 aa3.02□□□□□ -1.93
NMD2YHR077C TRM12Q04235 462 aa3.02□□□□□ -1.93
NMD2YHR077C YMR111CQ04461 462 aaPredicted RBP3.02□□□□□ -1.93
NMD2YHR077C AAD4Q07747 329 aa3.02□□□□□ -1.93
NMD2YHR077C PSR1Q07800 427 aa3.02□□□□□ -1.93
NMD2YHR077C ESA1Q08649 445 aa3.02□□□□□ -1.93
NMD2YHR077C YVC1Q12324 675 aa3.02□□□□□ -1.93
NMD2YHR077C AFI1Q99222 893 aa3.02□□□□□ -1.93
NMD2YHR077C PHO5P00635 467 aa3.01□□□□□ -1.93
NMD2YHR077C GCD2P12754 651 aaPredicted RBP3.01□□□□□ -1.93
NMD2YHR077C YAP1P19880 650 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C ADK2P26364 225 aa3.01□□□□□ -1.93
NMD2YHR077C PHO91P27514 894 aa3.01□□□□□ -1.93
NMD2YHR077C SPT5P27692 1063 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C MRPL9P31334 269 aa3.01□□□□□ -1.93
NMD2YHR077C PTM1P32857 523 aa3.01□□□□□ -1.93
NMD2YHR077C MAC1P35192 417 aa3.01□□□□□ -1.93
NMD2YHR077C FRE2P36033 711 aa3.01□□□□□ -1.93
NMD2YHR077C UIP5P36137 443 aa3.01□□□□□ -1.93
NMD2YHR077C MSC7P38694 644 aa3.01□□□□□ -1.93
NMD2YHR077C GVP36P40531 326 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C COG1P53079 417 aa3.01□□□□□ -1.93
NMD2YHR077C IST1P53843 298 aaPredicted RBP3.01□□□□□ -1.93
NMD2YHR077C SIW14P53965 281 aa3.01□□□□□ -1.93
NMD2YHR077C ENT5Q03769 411 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C ADY3Q07732 790 aa3.01□□□□□ -1.93
NMD2YHR077C YOL159CQ08300 171 aa3.01□□□□□ -1.93
NMD2YHR077C HOS1Q12214 470 aa3.01□□□□□ -1.93
NMD2YHR077C UBX3Q12229 455 aa3.01□□□□□ -1.93
NMD2YHR077C TAF3Q12297 353 aa3.01□□□□□ -1.93
NMD2YHR077C LPX1Q12405 387 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C ARP7Q12406 477 aa3.01□□□□□ -1.93
NMD2YHR077C YOR131CQ12486 218 aa3.01□□□□□ -1.93
NMD2YHR077C CAR1P00812 333 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C HSC82P15108 705 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C URA4P20051 364 aa3.01□□□□□ -1.93
NMD2YHR077C VPS3P23643 1011 aa3.01□□□□□ -1.93
NMD2YHR077C BEM1P29366 551 aa3.01□□□□□ -1.93
NMD2YHR077C TOA1P32773 286 aa3.01□□□□□ -1.93
NMD2YHR077C IRS4P36115 615 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C APM3P38153 483 aa3.01□□□□□ -1.93
NMD2YHR077C YHR131CP38835 850 aa3.01□□□□□ -1.93
NMD2YHR077C DIM1P41819 318 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C GAT1P43574 510 aa3.01□□□□□ -1.93
NMD2YHR077C BUD13P46947 266 aaPredicted RBP3.01□□□□□ -1.93
NMD2YHR077C AMA1P50082 593 aa3.01□□□□□ -1.93
NMD2YHR077C DUS1P53759 423 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C PNG1Q02890 363 aa3.01□□□□□ -1.93
NMD2YHR077C LDB17Q12342 491 aa3.01□□□□□ -1.93
NMD2YHR077C SRF1Q12516 437 aa3.01□□□□□ -1.93
NMD2YHR077C SUC2P00724 532 aa3.01□□□□□ -1.93
NMD2YHR077C MIS1P09440 975 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C SSE1P32589 693 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C THI80P35202 319 aa3.01□□□□□ -1.93
NMD2YHR077C EAP1P36041 632 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C SRP68P38687 599 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C TIM17P39515 158 aa3.01□□□□□ -1.93
NMD2YHR077C FRT2P39734 528 aa3.01□□□□□ -1.93
NMD2YHR077C SCS2P40075 244 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C PSF2P40359 213 aa3.01□□□□□ -1.93
NMD2YHR077C TES1P41903 349 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C RTT101P47050 842 aa3.01□□□□□ -1.93
NMD2YHR077C CSN12P47130 423 aa3.01□□□□□ -1.93
NMD2YHR077C PEX8P53248 589 aa3.01□□□□□ -1.93
NMD2YHR077C COG2P53271 262 aa3.01□□□□□ -1.93
NMD2YHR077C RMI1Q02685 241 aa3.01□□□□□ -1.93
NMD2YHR077C GOT1Q03554 138 aa3.01□□□□□ -1.93
NMD2YHR077C YDR179W-AQ03983 463 aa3.01□□□□□ -1.93
NMD2YHR077C BLS1Q06071 122 aa3.01□□□□□ -1.93
NMD2YHR077C AAD15Q08361 143 aa3.01□□□□□ -1.93
NMD2YHR077C LEA1Q08963 238 aaPredicted RBP3.01□□□□□ -1.93
NMD2YHR077C SPE3Q12074 293 aaKnown RBP3.01□□□□□ -1.93
NMD2YHR077C YOR342CQ12182 319 aa3.01□□□□□ -1.93
NMD2YHR077C SPT3P06844 337 aa3□□□□□ -1.93
NMD2YHR077C SPS1P08458 490 aa3□□□□□ -1.93
NMD2YHR077C TRX2P22803 104 aaKnown RBP3□□□□□ -1.93
NMD2YHR077C DBR1P24309 405 aaKnown RBP3□□□□□ -1.93
NMD2YHR077C RPL5P26321 297 aaKnown RBP3□□□□□ -1.93
NMD2YHR077C SKG1P36169 355 aa3□□□□□ -1.93
NMD2YHR077C ROT2P38138 954 aa3□□□□□ -1.93
NMD2YHR077C SFB3P38810 929 aa3□□□□□ -1.93
NMD2YHR077C BEM4P39011 633 aa3□□□□□ -1.93
NMD2YHR077C MET18P40469 1032 aa3□□□□□ -1.93
NMD2YHR077C SEC28P40509 296 aaKnown RBP3□□□□□ -1.93
NMD2YHR077C SEC26P41810 973 aaKnown RBP3□□□□□ -1.93
NMD2YHR077C NUP85P46673 744 aa3□□□□□ -1.93
NMD2YHR077C DIA3P52290 468 aa3□□□□□ -1.93
NMD2YHR077C IMA1P53051 589 aa3□□□□□ -1.93
NMD2YHR077C MCM6P53091 1017 aaKnown RBP3□□□□□ -1.93
NMD2YHR077C REX2P54964 269 aaKnown RBP3□□□□□ -1.93
NMD2YHR077C ECM9Q02202 377 aa3□□□□□ -1.93
NMD2YHR077C NAN1Q02931 896 aaKnown RBP3□□□□□ -1.93
NMD2YHR077C PMT7Q06644 662 aa3□□□□□ -1.93
NMD2YHR077C REH1Q06709 432 aa3□□□□□ -1.93
NMD2YHR077C YDL073WQ07454 984 aa3□□□□□ -1.93
NMD2YHR077C TRE2Q08693 809 aa3□□□□□ -1.93
NMD2YHR077C MLH3Q12083 715 aa3□□□□□ -1.93
NMD2YHR077C MDY2Q12285 212 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms