RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	SMF2	P38778	549 aa		4.07	□□□□□ -1.76
SPI1	YER150W	SSZ1	P38788	538 aa	Known RBP	4.07	□□□□□ -1.76
SPI1	YER150W	BST1	P43571	1029 aa		4.07	□□□□□ -1.76
SPI1	YER150W	HXT16	P47185	567 aa		4.07	□□□□□ -1.76
SPI1	YER150W	HSH155	P49955	971 aa	Known RBP	4.07	□□□□□ -1.76
SPI1	YER150W	GLO1	P50107	326 aa		4.07	□□□□□ -1.76
SPI1	YER150W	REG1	Q00816	1014 aa		4.07	□□□□□ -1.76
SPI1	YER150W	RSM28	Q03430	361 aa		4.07	□□□□□ -1.76
SPI1	YER150W	RSN1	Q03516	953 aa		4.07	□□□□□ -1.76
SPI1	YER150W	RKM2	Q03942	479 aa		4.07	□□□□□ -1.76
SPI1	YER150W	RAD30	Q04049	632 aa		4.07	□□□□□ -1.76
SPI1	YER150W	ECM11	Q04110	302 aa		4.07	□□□□□ -1.76
SPI1	YER150W	CSI1	Q04368	295 aa		4.07	□□□□□ -1.76
SPI1	YER150W	ENT4	Q07872	247 aa		4.07	□□□□□ -1.76
SPI1	YER150W	GSH2	Q08220	491 aa		4.07	□□□□□ -1.76
SPI1	YER150W	YOR059C	Q08448	450 aa	Known RBP	4.07	□□□□□ -1.76
SPI1	YER150W	TY1A-BL	Q12266	440 aa		4.07	□□□□□ -1.76
SPI1	YER150W	COX17	Q12287	69 aa		4.07	□□□□□ -1.76
SPI1	YER150W	YDR061W	Q12298	539 aa		4.07	□□□□□ -1.76
SPI1	YER150W	ARG81	P05085	880 aa		4.06	□□□□□ -1.76
SPI1	YER150W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SPI1	YER150W	RSR1	P13856	272 aa		4.06	□□□□□ -1.76
SPI1	YER150W	GID7	P25569	745 aa		4.06	□□□□□ -1.76
SPI1	YER150W	KNS1	P32350	737 aa	Predicted RBP	4.06	□□□□□ -1.76
SPI1	YER150W	PGM1	P33401	570 aa	Known RBP	4.06	□□□□□ -1.76
SPI1	YER150W	UBP13	P38187	747 aa		4.06	□□□□□ -1.76
SPI1	YER150W	YHR182W	P38870	785 aa		4.06	□□□□□ -1.76
SPI1	YER150W	PET100	P38958	111 aa		4.06	□□□□□ -1.76
SPI1	YER150W	SSO2	P39926	295 aa		4.06	□□□□□ -1.76
SPI1	YER150W	YER085C	P40058	173 aa		4.06	□□□□□ -1.76
SPI1	YER150W	SCC4	P40090	624 aa		4.06	□□□□□ -1.76
SPI1	YER150W	IST3	P40565	148 aa	Predicted RBP	4.06	□□□□□ -1.76
SPI1	YER150W	RLP7	P40693	322 aa	Known RBP	4.06	□□□□□ -1.76
SPI1	YER150W	MAD2	P40958	196 aa		4.06	□□□□□ -1.76
SPI1	YER150W	VMA13	P41807	478 aa	Known RBP	4.06	□□□□□ -1.76
SPI1	YER150W	DLD2	P46681	530 aa	Known RBP	4.06	□□□□□ -1.76
SPI1	YER150W	YJR124C	P47159	448 aa		4.06	□□□□□ -1.76
SPI1	YER150W	MIG2	P53035	382 aa		4.06	□□□□□ -1.76
SPI1	YER150W	YGL138C	P53122	345 aa		4.06	□□□□□ -1.76
SPI1	YER150W	YNL143C	P53908	130 aa		4.06	□□□□□ -1.76
SPI1	YER150W	MEC3	Q02574	474 aa		4.06	□□□□□ -1.76
SPI1	YER150W	KAP120	Q02932	1032 aa		4.06	□□□□□ -1.76
SPI1	YER150W	RLI1	Q03195	608 aa	Known RBP	4.06	□□□□□ -1.76
SPI1	YER150W	ARX1	Q03862	593 aa	Known RBP	4.06	□□□□□ -1.76
SPI1	YER150W	SOV1	Q04748	898 aa		4.06	□□□□□ -1.76
SPI1	YER150W	IVY1	Q04934	453 aa		4.06	□□□□□ -1.76
SPI1	YER150W	FUS2	Q05670	677 aa		4.06	□□□□□ -1.76
SPI1	YER150W	CUR1	Q06469	252 aa		4.06	□□□□□ -1.76
SPI1	YER150W	THI22	Q06490	572 aa		4.06	□□□□□ -1.76
SPI1	YER150W	AAD4	Q07747	329 aa		4.06	□□□□□ -1.76
SPI1	YER150W	RSB1	Q08417	382 aa		4.06	□□□□□ -1.76
SPI1	YER150W	DSE3	Q08729	430 aa		4.06	□□□□□ -1.76
SPI1	YER150W	RTK1	Q12100	620 aa	Predicted RBP	4.06	□□□□□ -1.76
SPI1	YER150W	PCK1	P10963	549 aa		4.05	□□□□□ -1.76
SPI1	YER150W	FAR1	P21268	830 aa		4.05	□□□□□ -1.76
SPI1	YER150W	SEC15	P22224	910 aa		4.05	□□□□□ -1.76
SPI1	YER150W	GEX1	P25596	615 aa		4.05	□□□□□ -1.76
SPI1	YER150W	AFG2	P32794	780 aa		4.05	□□□□□ -1.76
SPI1	YER150W	OCT1	P35999	772 aa		4.05	□□□□□ -1.76
SPI1	YER150W	YKR051W	P36142	418 aa		4.05	□□□□□ -1.76
SPI1	YER150W	YKR075C	P36155	307 aa		4.05	□□□□□ -1.76
SPI1	YER150W	ALG3	P38179	458 aa		4.05	□□□□□ -1.76
SPI1	YER150W	ATG14	P38270	344 aa		4.05	□□□□□ -1.76
SPI1	YER150W	RRT2	P38332	387 aa		4.05	□□□□□ -1.76
SPI1	YER150W	TAE1	P38340	232 aa		4.05	□□□□□ -1.76
SPI1	YER150W	ERC1	P38767	581 aa		4.05	□□□□□ -1.76
SPI1	YER150W	YTA12	P40341	825 aa		4.05	□□□□□ -1.76
SPI1	YER150W	SHQ1	P40486	507 aa	Predicted RBP	4.05	□□□□□ -1.76
SPI1	YER150W	INP51	P40559	946 aa	Known RBP	4.05	□□□□□ -1.76
SPI1	YER150W	EFM3	P47163	339 aa		4.05	□□□□□ -1.76
SPI1	YER150W	MRK1	P50873	501 aa		4.05	□□□□□ -1.76
SPI1	YER150W	YGR066C	P53242	292 aa		4.05	□□□□□ -1.76
SPI1	YER150W	RRP46	P53256	223 aa	Predicted RBP	4.05	□□□□□ -1.76
SPI1	YER150W	NOP15	P53927	220 aa	Predicted RBP	4.05	□□□□□ -1.76
SPI1	YER150W	HDA1	P53973	706 aa		4.05	□□□□□ -1.76
SPI1	YER150W	PET117	Q02771	107 aa		4.05	□□□□□ -1.76
SPI1	YER150W	MUB1	Q03162	620 aa		4.05	□□□□□ -1.76
SPI1	YER150W	YMR102C	Q03177	834 aa		4.05	□□□□□ -1.76
SPI1	YER150W	RPN9	Q04062	393 aa	Known RBP	4.05	□□□□□ -1.76
SPI1	YER150W	GIM5	Q04493	163 aa		4.05	□□□□□ -1.76
SPI1	YER150W	CRF1	Q04930	467 aa		4.05	□□□□□ -1.76
SPI1	YER150W	CRD1	Q07560	283 aa		4.05	□□□□□ -1.76
SPI1	YER150W	LYS21	Q12122	440 aa	Known RBP	4.05	□□□□□ -1.76
SPI1	YER150W	YJR112W-A	Q3E743	109 aa		4.05	□□□□□ -1.76
SPI1	YER150W	YLR278C	Q05854	1341 aa		4.04	□□□□□ -1.76
SPI1	YER150W	VPS63	O13549	108 aa		4.04	□□□□□ -1.76
SPI1	YER150W	DIF1	O13577	133 aa		4.04	□□□□□ -1.76
SPI1	YER150W	SSA3	P09435	649 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	CDC23	P16522	626 aa		4.04	□□□□□ -1.76
SPI1	YER150W	PET18	P25362	215 aa		4.04	□□□□□ -1.76
SPI1	YER150W	IMG2	P25642	146 aa	Predicted RBP	4.04	□□□□□ -1.76
SPI1	YER150W	SYN8	P31377	255 aa		4.04	□□□□□ -1.76
SPI1	YER150W	ARP2	P32381	391 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	MF(ALPHA)2	P32435	120 aa		4.04	□□□□□ -1.76
SPI1	YER150W	MRT4	P33201	236 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	GDH2	P33327	1092 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	YBL055C	P34220	418 aa	Predicted RBP	4.04	□□□□□ -1.76
SPI1	YER150W	YKL070W	P36087	169 aa		4.04	□□□□□ -1.76
SPI1	YER150W	NEM1	P38757	446 aa		4.04	□□□□□ -1.76
SPI1	YER150W	BEM4	P39011	633 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms