RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRE4	YDL231C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
BRE4	YDL231C	RFC3	P38629	340 aa		4.22	□□□□□ -1.73
BRE4	YDL231C	APE4	P38821	490 aa		4.22	□□□□□ -1.73
BRE4	YDL231C	FRT2	P39734	528 aa		4.22	□□□□□ -1.73
BRE4	YDL231C	HPM1	P40481	377 aa		4.22	□□□□□ -1.73
BRE4	YDL231C	SET2	P46995	733 aa	Known RBP	4.22	□□□□□ -1.73
BRE4	YDL231C	AMA1	P50082	593 aa		4.22	□□□□□ -1.73
BRE4	YDL231C	EFM6	P53970	246 aa		4.22	□□□□□ -1.73
BRE4	YDL231C	HEH2	Q03281	663 aa		4.22	□□□□□ -1.73
BRE4	YDL231C	ENT4	Q07872	247 aa		4.22	□□□□□ -1.73
BRE4	YDL231C	YOR378W	Q08902	515 aa		4.22	□□□□□ -1.73
BRE4	YDL231C	MDY2	Q12285	212 aa		4.22	□□□□□ -1.73
BRE4	YDL231C	CCP1	P00431	361 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	MPH2	P0CD99	609 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	SIR1	P21691	654 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	RAM1	P22007	431 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	PAT1	P25644	796 aa	Known RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	PRP18	P33411	251 aa	Predicted RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	NUP60	P39705	539 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	ALG8	P40351	577 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	YNL035C	P53962	389 aa	Known RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	YNL010W	P53981	241 aa	Known RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	VPS16	Q03308	798 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	ARX1	Q03862	593 aa	Known RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	RSC3	Q06639	885 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	CUE5	Q08412	411 aa	Known RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	MST1	P07236	462 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	YPK1	P12688	680 aa	Known RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	GCD2	P12754	651 aa	Predicted RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	ATP12	P22135	325 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	CYS3	P31373	394 aa	Known RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	CCR4	P31384	837 aa	Known RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	MRPL40	P36534	297 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	RIM11	P38615	370 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	ARP1	P38696	384 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	YHI9	P38765	294 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	YHR182W	P38870	785 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	VAC8	P39968	578 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	FMP32	P43557	207 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	MON1	P53129	644 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	CUS2	P53830	285 aa	Predicted RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	TIM11	P81449	96 aa	Predicted RBP	4.21	□□□□□ -1.74
BRE4	YDL231C	CDC123	Q05791	360 aa		4.21	□□□□□ -1.74
BRE4	YDL231C	SEM1	O94742	89 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	IMA3	P0CW40	589 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	IMA4	P0CW41	589 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	ABF1	P14164	731 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	MSH2	P25847	964 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	PTM1	P32857	523 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	SGE1	P33335	543 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	YHL041W	P38730	149 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	BTT1	P40314	149 aa	Predicted RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	UTP18	P40362	594 aa	Predicted RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	OPT1	P40897	799 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	YPT32	P51996	222 aa	Known RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	PAN2	P53010	1115 aa	Predicted RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	PEX8	P53248	589 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	CLD1	P53264	445 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	YNL143C	P53908	130 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	YPL034W	Q03083	165 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	ERV41	Q04651	352 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	VTA1	Q06263	330 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	IMA2	Q08295	589 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	UPC2	Q12151	913 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	AHC1	Q12433	566 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	GUK1	P15454	187 aa	Known RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	RGR1	P19263	1082 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	HSP60	P19882	572 aa	Known RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	AMS1	P22855	1083 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	BRF1	P29056	596 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	TSA1	P34760	196 aa	Known RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	LRP1	P38801	184 aa	Known RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	BZZ1	P38822	633 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	YHR218W	P38899	603 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	AXL1	P40851	1208 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	RMI1	Q02685	241 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	PET117	Q02771	107 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	SSL1	Q04673	461 aa	Predicted RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	SYT1	Q06836	1226 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	HRK1	Q08732	759 aa	Known RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	NUS1	Q12063	375 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	OCA6	Q12454	224 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	KCS1	Q12494	1050 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	LDB19	Q12502	818 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	YBL113C	Q7M4S9	792 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	APM4	Q99186	491 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	STE2	D6VTK4	431 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	DST1	P07273	309 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	PMA2	P19657	947 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	MEI5	P32489	222 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	SPR1	P32603	445 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	YBR032W	P38223	100 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	MNN1	P39106	762 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	ACO2	P39533	789 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	YGR053C	P53234	283 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	SRP1	Q02821	542 aa	Known RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	NHP10	Q03435	203 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	ECM22	Q05958	814 aa	Predicted RBP	4.2	□□□□□ -1.74
BRE4	YDL231C	YPQ1	Q12010	308 aa		4.2	□□□□□ -1.74
BRE4	YDL231C	ULA1	Q12059	462 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms