RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 TBC1D9Q6ZT07 1266 aa16.75■□□□□ 0.27
HLA-C-210ENST00000640219 METTL16Q86W50 562 aaKnown RBP16.75■□□□□ 0.27
HLA-C-210ENST00000640219 NOL10Q9BSC4 688 aaKnown RBP16.75■□□□□ 0.27
HLA-C-210ENST00000640219 RAI14Q9P0K7 980 aa16.75■□□□□ 0.27
HLA-C-210ENST00000640219 BDP1A6H8Y1 2624 aa16.75■□□□□ 0.27
HLA-C-210ENST00000640219 SYNGAP1Q96PV0 1343 aa16.74■□□□□ 0.27
HLA-C-210ENST00000640219 MVPQ14764 893 aaKnown RBP16.74■□□□□ 0.27
HLA-C-210ENST00000640219 XAGE2Q96GT9 111 aa16.74■□□□□ 0.27
HLA-C-210ENST00000640219 C12orf42Q96LP6 360 aa16.74■□□□□ 0.27
HLA-C-210ENST00000640219 FEZ1Q99689 392 aa16.74■□□□□ 0.27
HLA-C-210ENST00000640219 HMG20BQ9P0W2 317 aa16.74■□□□□ 0.27
HLA-C-210ENST00000640219 ARIH1Q9Y4X5 557 aaPredicted RBP16.74■□□□□ 0.27
HLA-C-210ENST00000640219 SIPA1L1O43166 1804 aa16.74■□□□□ 0.27
HLA-C-210ENST00000640219 A0A1B0GUL7 405 aa16.73■□□□□ 0.27
HLA-C-210ENST00000640219 PQBP1O60828 265 aaKnown RBP16.73■□□□□ 0.27
HLA-C-210ENST00000640219 ADORA2AP29274 412 aa16.73■□□□□ 0.27
HLA-C-210ENST00000640219 FAM47AQ5JRC9 791 aa16.73■□□□□ 0.27
HLA-C-210ENST00000640219 PRAMEF19Q5SWL8 479 aa16.73■□□□□ 0.27
HLA-C-210ENST00000640219 LBX2Q6XYB7 198 aa16.73■□□□□ 0.27
HLA-C-210ENST00000640219 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
HLA-C-210ENST00000640219 MAPKAPK5Q8IW41 473 aa16.73■□□□□ 0.27
HLA-C-210ENST00000640219 TMEM39AQ9NV64 488 aa16.73■□□□□ 0.27
HLA-C-210ENST00000640219 PHF24Q9UPV7 400 aa16.73■□□□□ 0.27
HLA-C-210ENST00000640219 STRNO43815 780 aa16.72■□□□□ 0.27
HLA-C-210ENST00000640219 GH2P01242 217 aa16.72■□□□□ 0.27
HLA-C-210ENST00000640219 IGFBP4P22692 258 aa16.72■□□□□ 0.27
HLA-C-210ENST00000640219 PBX2P40425 430 aa16.72■□□□□ 0.27
HLA-C-210ENST00000640219 POLA2Q14181 598 aa16.72■□□□□ 0.27
HLA-C-210ENST00000640219 PI16Q6UXB8 463 aa16.72■□□□□ 0.27
HLA-C-210ENST00000640219 SPATA5Q8NB90 893 aa16.72■□□□□ 0.27
HLA-C-210ENST00000640219 TGFBRAP1Q8WUH2 860 aa16.72■□□□□ 0.27
HLA-C-210ENST00000640219 NECAB3Q96P71 396 aaPredicted RBP16.72■□□□□ 0.27
HLA-C-210ENST00000640219 PALD1Q9ULE6 856 aa16.72■□□□□ 0.27
HLA-C-210ENST00000640219 HCN4Q9Y3Q4 1203 aa16.72■□□□□ 0.27
HLA-C-210ENST00000640219 MYO5AQ9Y4I1 1855 aaKnown RBP16.71■□□□□ 0.27
HLA-C-210ENST00000640219 NCOR1O75376 2440 aa16.71■□□□□ 0.27
HLA-C-210ENST00000640219 BAG3O95817 575 aa16.71■□□□□ 0.27
HLA-C-210ENST00000640219 USP14P54578 494 aa16.71■□□□□ 0.27
HLA-C-210ENST00000640219 ADGRE1Q14246 886 aa16.71■□□□□ 0.27
HLA-C-210ENST00000640219 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.71■□□□□ 0.273e-7■■□□□ 12.7
HLA-C-210ENST00000640219 PBX4Q9BYU1 374 aa16.71■□□□□ 0.27
HLA-C-210ENST00000640219 AATFQ9NY61 560 aaKnown RBP eCLIP16.71■□□□□ 0.27
HLA-C-210ENST00000640219 LRP2BPQ9P2M1 347 aa16.71■□□□□ 0.27
HLA-C-210ENST00000640219 HDAC5Q9UQL6 1122 aa16.71■□□□□ 0.27
HLA-C-210ENST00000640219 AKAP2Q9Y2D5 859 aa16.71■□□□□ 0.27
HLA-C-210ENST00000640219 FLT1P17948 1338 aa16.7■□□□□ 0.26
HLA-C-210ENST00000640219 SPDYE16A6NNV3 312 aaPredicted RBP16.7■□□□□ 0.26
HLA-C-210ENST00000640219 GRXCR1A8MXD5 290 aa16.7■□□□□ 0.26
HLA-C-210ENST00000640219 COBLO75128 1261 aa16.7■□□□□ 0.26
HLA-C-210ENST00000640219 PLCG2P16885 1265 aa16.7■□□□□ 0.26
HLA-C-210ENST00000640219 VCAM1P19320 739 aa16.7■□□□□ 0.26
HLA-C-210ENST00000640219 RRP1P56182 461 aaKnown RBP16.7■□□□□ 0.26
HLA-C-210ENST00000640219 ATP8B2P98198 1209 aa16.7■□□□□ 0.26
HLA-C-210ENST00000640219 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
HLA-C-210ENST00000640219 SLC44A5Q8NCS7 719 aa16.7■□□□□ 0.26
HLA-C-210ENST00000640219 MOV10L1Q9BXT6 1211 aaKnown RBP16.7■□□□□ 0.26
HLA-C-210ENST00000640219 TSPYL2Q9H2G4 693 aaPredicted RBP16.7■□□□□ 0.26
HLA-C-210ENST00000640219 XPNPEP3Q9NQH7 507 aa16.7■□□□□ 0.26
HLA-C-210ENST00000640219 SLC5A4Q9NY91 659 aa16.7■□□□□ 0.26
HLA-C-210ENST00000640219 HLA-DOAP06340 250 aa16.69■□□□□ 0.26
HLA-C-210ENST00000640219 FAAP100Q0VG06 881 aa16.69■□□□□ 0.26
HLA-C-210ENST00000640219 GORABQ5T7V8 394 aa16.69■□□□□ 0.26
HLA-C-210ENST00000640219 RNF180Q86T96 592 aa16.69■□□□□ 0.26
HLA-C-210ENST00000640219 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
HLA-C-210ENST00000640219 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
HLA-C-210ENST00000640219 LRFN3Q9BTN0 628 aa16.69■□□□□ 0.26
HLA-C-210ENST00000640219 KIAA1683Q9H0B3 1180 aa16.69■□□□□ 0.26
HLA-C-210ENST00000640219 SAP30BPQ9UHR5 308 aaKnown RBP16.69■□□□□ 0.26
HLA-C-210ENST00000640219 A0A1W2PQ45 241 aaPredicted RBP16.68■□□□□ 0.26
HLA-C-210ENST00000640219 A0A1W2PQY0 241 aa16.68■□□□□ 0.26
HLA-C-210ENST00000640219 DCDC2CA8MYV0 355 aa16.68■□□□□ 0.26
HLA-C-210ENST00000640219 SURF6O75683 361 aaKnown RBP16.68■□□□□ 0.26
HLA-C-210ENST00000640219 PGK1P00558 417 aa16.68■□□□□ 0.26
HLA-C-210ENST00000640219 TIMP1P01033 207 aa16.68■□□□□ 0.26
HLA-C-210ENST00000640219 RARBP10826 455 aa16.68■□□□□ 0.26
HLA-C-210ENST00000640219 BMP1P13497 986 aa16.68■□□□□ 0.26
HLA-C-210ENST00000640219 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.26
HLA-C-210ENST00000640219 RAB3GAP1Q15042 981 aa16.68■□□□□ 0.26
HLA-C-210ENST00000640219 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
HLA-C-210ENST00000640219 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
HLA-C-210ENST00000640219 CXXC1Q9P0U4 656 aaPredicted RBP16.68■□□□□ 0.26
HLA-C-210ENST00000640219 EXOC6BQ9Y2D4 811 aa16.68■□□□□ 0.26
HLA-C-210ENST00000640219 ZNF236Q9UL36 1845 aa16.68■□□□□ 0.26
HLA-C-210ENST00000640219 ERCC3P19447 782 aa16.67■□□□□ 0.26
HLA-C-210ENST00000640219 PPP4CP60510 307 aa16.67■□□□□ 0.26
HLA-C-210ENST00000640219 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
HLA-C-210ENST00000640219 TMEM240Q5SV17 173 aa16.67■□□□□ 0.26
HLA-C-210ENST00000640219 NAA16Q6N069 864 aaPredicted RBP16.67■□□□□ 0.26
HLA-C-210ENST00000640219 CCDC174Q6PII3 467 aa16.67■□□□□ 0.26
HLA-C-210ENST00000640219 ANKRD33Q7Z3H0 272 aa16.67■□□□□ 0.26
HLA-C-210ENST00000640219 SHCBP1Q8NEM2 672 aa16.67■□□□□ 0.26
HLA-C-210ENST00000640219 ACER1Q8TDN7 264 aa16.67■□□□□ 0.26
HLA-C-210ENST00000640219 TOX2Q96NM4 488 aa16.67■□□□□ 0.26
HLA-C-210ENST00000640219 TLR7Q9NYK1 1049 aaKnown RBP16.67■□□□□ 0.26
HLA-C-210ENST00000640219 APBB1O00213 710 aa16.66■□□□□ 0.26
HLA-C-210ENST00000640219 PPIGQ13427 754 aaKnown RBP eCLIP16.66■□□□□ 0.26
HLA-C-210ENST00000640219 MFSD5Q6N075 450 aa16.66■□□□□ 0.26
HLA-C-210ENST00000640219 C16orf59Q7L2K0 433 aa16.66■□□□□ 0.26
HLA-C-210ENST00000640219 MAML3Q96JK9 1138 aa16.66■□□□□ 0.26
HLA-C-210ENST00000640219 SPATC1LQ9H0A9 340 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms