RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 NBPF12Q5TAG4 269 aaPredicted RBP10.72□□□□□ -0.69
CCDC7-212ENST00000639041 HEATR6Q6AI08 1181 aaKnown RBP10.72□□□□□ -0.69
CCDC7-212ENST00000639041 ZNF662Q6ZS27 426 aa10.72□□□□□ -0.69
CCDC7-212ENST00000639041 ST13P5Q8NFI4 369 aaPredicted RBP10.72□□□□□ -0.69
CCDC7-212ENST00000639041 PPP1R14AQ96A00 147 aa10.72□□□□□ -0.69
CCDC7-212ENST00000639041 TP53INP1Q96A56 240 aa10.72□□□□□ -0.69
CCDC7-212ENST00000639041 DUSP23Q9BVJ7 150 aa10.72□□□□□ -0.69
CCDC7-212ENST00000639041 LRRN2O75325 713 aa10.71□□□□□ -0.69
CCDC7-212ENST00000639041 FAM87AP0C7U9 286 aa10.71□□□□□ -0.69
CCDC7-212ENST00000639041 SLC10A6Q3KNW5 377 aa10.71□□□□□ -0.69
CCDC7-212ENST00000639041 HAUS7Q99871 368 aa10.71□□□□□ -0.69
CCDC7-212ENST00000639041 COL17A1Q9UMD9 1497 aaPredicted RBP10.7□□□□□ -0.7
CCDC7-212ENST00000639041 RNF225M0QZC1 329 aaPredicted RBP10.7□□□□□ -0.7
CCDC7-212ENST00000639041 EOMESO95936 686 aa10.7□□□□□ -0.7
CCDC7-212ENST00000639041 ADAT2Q7Z6V5 191 aaKnown RBP10.7□□□□□ -0.7
CCDC7-212ENST00000639041 CLEC10AQ8IUN9 316 aa10.7□□□□□ -0.7
CCDC7-212ENST00000639041 SHISA5Q8N114 240 aa10.7□□□□□ -0.7
CCDC7-212ENST00000639041 TBC1D32Q96NH3 1257 aa10.7□□□□□ -0.7
CCDC7-212ENST00000639041 FAM83CQ9BQN1 747 aa10.7□□□□□ -0.7
CCDC7-212ENST00000639041 LGR4Q9BXB1 951 aa10.7□□□□□ -0.7
CCDC7-212ENST00000639041 SUSD2Q9UGT4 822 aa10.7□□□□□ -0.7
CCDC7-212ENST00000639041 LEMD3Q9Y2U8 911 aa10.7□□□□□ -0.7
CCDC7-212ENST00000639041 ESYT3A0FGR9 886 aa10.69□□□□□ -0.7
CCDC7-212ENST00000639041 ADMP35318 185 aa10.69□□□□□ -0.7
CCDC7-212ENST00000639041 ETV3P41162 512 aa10.69□□□□□ -0.7
CCDC7-212ENST00000639041 VWCEQ96DN2 955 aa10.69□□□□□ -0.7
CCDC7-212ENST00000639041 APBA2Q99767 749 aa10.69□□□□□ -0.7
CCDC7-212ENST00000639041 C7orf69Q9H7B7 122 aa10.69□□□□□ -0.7
CCDC7-212ENST00000639041 ZNF451Q9Y4E5 1061 aa10.69□□□□□ -0.7
CCDC7-212ENST00000639041 ANKRD34BA5PLL1 514 aa10.68□□□□□ -0.7
CCDC7-212ENST00000639041 CBFA2T2O43439 604 aa10.68□□□□□ -0.7
CCDC7-212ENST00000639041 GATA4P43694 442 aa10.68□□□□□ -0.7
CCDC7-212ENST00000639041 FBXL6Q8N531 539 aa10.68□□□□□ -0.7
CCDC7-212ENST00000639041 CWC22Q9HCG8 908 aaKnown RBP10.68□□□□□ -0.7
CCDC7-212ENST00000639041 FANCLQ9NW38 375 aa10.68□□□□□ -0.7
CCDC7-212ENST00000639041 STOML1Q9UBI4 398 aa10.68□□□□□ -0.7
CCDC7-212ENST00000639041 APEX2Q9UBZ4 518 aa10.68□□□□□ -0.7
CCDC7-212ENST00000639041 FBXL21Q9UKT6 434 aa10.68□□□□□ -0.7
CCDC7-212ENST00000639041 CBX7O95931 251 aa10.67□□□□□ -0.7
CCDC7-212ENST00000639041 RNF4P78317 190 aa10.67□□□□□ -0.7
CCDC7-212ENST00000639041 AUHQ13825 339 aaKnown RBP10.67□□□□□ -0.7
CCDC7-212ENST00000639041 C7orf61Q8IZ16 206 aa10.67□□□□□ -0.7
CCDC7-212ENST00000639041 RNF141Q8WVD5 230 aa10.67□□□□□ -0.7
CCDC7-212ENST00000639041 SMARCC1Q92922 1105 aaPredicted RBP10.67□□□□□ -0.7
CCDC7-212ENST00000639041 SPATA9Q9BWV2 254 aa10.67□□□□□ -0.7
CCDC7-212ENST00000639041 LRP2BPQ9P2M1 347 aa10.67□□□□□ -0.7
CCDC7-212ENST00000639041 RAXQ9Y2V3 346 aa10.67□□□□□ -0.7
CCDC7-212ENST00000639041 SUGT1Q9Y2Z0 365 aa10.67□□□□□ -0.7
CCDC7-212ENST00000639041 FAM153BP0C7A2 387 aa10.66□□□□□ -0.7
CCDC7-212ENST00000639041 SQSTM1Q13501 440 aa10.66□□□□□ -0.7
CCDC7-212ENST00000639041 EGFLAMQ63HQ2 1017 aa10.66□□□□□ -0.7
CCDC7-212ENST00000639041 ADCY4Q8NFM4 1077 aa10.66□□□□□ -0.7
CCDC7-212ENST00000639041 GIMAP7Q8NHV1 300 aa10.66□□□□□ -0.7
CCDC7-212ENST00000639041 KLHL25Q9H0H3 589 aa10.66□□□□□ -0.7
CCDC7-212ENST00000639041 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC7-212ENST00000639041 SHOXO15266 292 aa10.65□□□□□ -0.7
CCDC7-212ENST00000639041 CANXP27824 592 aaKnown RBP10.65□□□□□ -0.7
CCDC7-212ENST00000639041 SNW1Q13573 536 aaKnown RBP10.65□□□□□ -0.7
CCDC7-212ENST00000639041 C2orf27AQ580R0 203 aa10.65□□□□□ -0.7
CCDC7-212ENST00000639041 LRRN4CLQ8ND94 238 aa10.65□□□□□ -0.7
CCDC7-212ENST00000639041 THAP3Q8WTV1 239 aaPredicted RBP10.65□□□□□ -0.7
CCDC7-212ENST00000639041 GATA6Q92908 595 aa10.65□□□□□ -0.7
CCDC7-212ENST00000639041 BRF1Q92994 677 aa10.65□□□□□ -0.7
CCDC7-212ENST00000639041 MFSD14AQ96MC6 490 aa10.65□□□□□ -0.7
CCDC7-212ENST00000639041 PRDM5Q9NQX1 630 aaPredicted RBP10.65□□□□□ -0.7
CCDC7-212ENST00000639041 SBNO2Q9Y2G9 1366 aa10.65□□□□□ -0.71
CCDC7-212ENST00000639041 FAM170BA6NMN3 283 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 NAT2P11245 290 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 CD247P20963 164 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 CYP7A1P22680 504 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 HSD3B2P26439 372 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 NBPF9Q3BBW0 867 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 FBXL18Q96ME1 805 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 ASPNQ9BXN1 380 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 PRDM14Q9GZV8 571 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 GBP3Q9H0R5 595 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 EPN3Q9H201 632 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 GP6Q9HCN6 339 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 PTCH2Q9Y6C5 1203 aa10.64□□□□□ -0.71
CCDC7-212ENST00000639041 AGRPO00253 132 aa10.63□□□□□ -0.71
CCDC7-212ENST00000639041 CDC45O75419 566 aa10.63□□□□□ -0.71
CCDC7-212ENST00000639041 ZNF143P52747 638 aaPredicted RBP10.63□□□□□ -0.71
CCDC7-212ENST00000639041 RASSF7Q02833 373 aa10.63□□□□□ -0.71
CCDC7-212ENST00000639041 NOL9Q5SY16 702 aaKnown RBP10.63□□□□□ -0.71
CCDC7-212ENST00000639041 SFRP5Q5T4F7 317 aa10.63□□□□□ -0.71
CCDC7-212ENST00000639041 OGFOD3Q6PK18 319 aa10.63□□□□□ -0.71
CCDC7-212ENST00000639041 ZAR1Q86SH2 424 aa10.63□□□□□ -0.71
CCDC7-212ENST00000639041 HEXIM2Q96MH2 286 aaKnown RBP10.63□□□□□ -0.71
CCDC7-212ENST00000639041 PCDHB12Q9Y5F1 795 aa10.63□□□□□ -0.71
CCDC7-212ENST00000639041 A0A1W2PQU0 124 aa10.62□□□□□ -0.71
CCDC7-212ENST00000639041 PRR33A8MZF0 331 aa10.62□□□□□ -0.71
CCDC7-212ENST00000639041 ENPP3O14638 875 aa10.62□□□□□ -0.71
CCDC7-212ENST00000639041 PPM1BO75688 479 aa10.62□□□□□ -0.71
CCDC7-212ENST00000639041 ITGAVP06756 1048 aa10.62□□□□□ -0.71
CCDC7-212ENST00000639041 ANKRD39Q53RE8 183 aa10.62□□□□□ -0.71
CCDC7-212ENST00000639041 PRR23CQ6ZRP0 262 aa10.62□□□□□ -0.71
CCDC7-212ENST00000639041 ZNF765Q7L2R6 523 aa10.62□□□□□ -0.71
CCDC7-212ENST00000639041 FAM214BQ7L5A3 538 aa10.62□□□□□ -0.71
CCDC7-212ENST00000639041 LRRC47Q8N1G4 583 aaKnown RBP10.62□□□□□ -0.71
CCDC7-212ENST00000639041 APPBP2Q92624 585 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms