RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 MIGA1Q8NAN2 632 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 TFCP2L1Q9NZI6 479 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 SLC13A4Q9UKG4 626 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 IRS4O14654 1257 aaPredicted RBP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 RAP1GDS1P52306 607 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 TRIM58Q8NG06 486 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 SKA2Q8WVK7 121 aaPredicted RBP9.82□□□□□ -0.84
GABRB3-216ENST00000628124 TRIM4Q9C037 500 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 CHPF2Q9P2E5 772 aa9.82□□□□□ -0.84
GABRB3-216ENST00000628124 ANKRD36BQ8N2N9 1353 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 GCNT3O95395 438 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 TXKP42681 527 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 EIF6P56537 245 aaKnown RBP9.81□□□□□ -0.84
GABRB3-216ENST00000628124 DDB1Q16531 1140 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 AKAP4Q5JQC9 854 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 TTC38Q5R3I4 469 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 TSHZ3Q63HK5 1081 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 UBE2Q2Q8WVN8 375 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 MRPL44Q9H9J2 332 aaKnown RBP9.81□□□□□ -0.84
GABRB3-216ENST00000628124 DDX41Q9UJV9 622 aaKnown RBP9.81□□□□□ -0.84
GABRB3-216ENST00000628124 PCDHB13Q9Y5F0 798 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 HEXIM1O94992 359 aaKnown RBP9.81□□□□□ -0.84
GABRB3-216ENST00000628124 PRIM1P49642 420 aaKnown RBP9.81□□□□□ -0.84
GABRB3-216ENST00000628124 AK2P54819 239 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 FANCCQ00597 558 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 BEND3Q5T5X7 828 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 EHBP1L1Q8N3D4 1523 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 SOS1Q07889 1333 aaPredicted RBP9.81□□□□□ -0.84
GABRB3-216ENST00000628124 XPOTO43592 962 aaKnown RBP9.81□□□□□ -0.84
GABRB3-216ENST00000628124 TOM1O60784 492 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 PFDN1O60925 122 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 IFNB1P01574 187 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 KIF22Q14807 665 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 BRD3Q15059 726 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 TSC1Q92574 1164 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 CARD6Q9BX69 1037 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 ST7Q9NRC1 585 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 PTPREP23469 700 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 NFKBIAP25963 317 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 ADCY8P40145 1251 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 C4orf50Q6ZRC1 276 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 PIK3AP1Q6ZUJ8 805 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 ZNF526Q8TF50 670 aaPredicted RBP9.81□□□□□ -0.84
GABRB3-216ENST00000628124 MYO1AQ9UBC5 1043 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 SCINQ9Y6U3 715 aa9.81□□□□□ -0.84
GABRB3-216ENST00000628124 PRG4Q92954 1404 aaPredicted RBP9.81□□□□□ -0.84
GABRB3-216ENST00000628124 EIF3DO15371 548 aaKnown RBP eCLIP9.8□□□□□ -0.84
GABRB3-216ENST00000628124 TTI1O43156 1089 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 ECE1P42892 770 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 IFIH1Q9BYX4 1025 aaKnown RBP9.8□□□□□ -0.84
GABRB3-216ENST00000628124 IL1RL1Q01638 556 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 ARHGEF6Q15052 776 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 AOC3Q16853 763 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 FNBP4Q8N3X1 1017 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-216ENST00000628124 LRRC8CQ8TDW0 803 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 PARD3BQ8TEW8 1205 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 PAWRQ96IZ0 340 aaKnown RBP9.8□□□□□ -0.84
GABRB3-216ENST00000628124 RPS6KC1Q96S38 1066 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 SPDYE2BA6NHP3 402 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 E9PMD0 336 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 THAP12O43422 761 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 SPDYE6P0CI01 402 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 SLC1A4P43007 532 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 PARP10Q53GL7 1025 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 PPP1R2P3Q6NXS1 205 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 ARMC9Q7Z3E5 817 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 EFCAB13Q8IY85 973 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 SRRM1Q8IYB3 904 aaKnown RBP9.8□□□□□ -0.84
GABRB3-216ENST00000628124 FAM186BQ8IYM0 893 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 CEP19Q96LK0 163 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 KIFC3Q9BVG8 833 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 SCHIP1Q9P0W5 487 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-216ENST00000628124 RIMBP2O15034 1052 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 PDXDC1Q6P996 788 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 ATP6V1E2Q96A05 226 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 FGD4Q96M96 766 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 TACO1Q9BSH4 297 aaKnown RBP9.8□□□□□ -0.84
GABRB3-216ENST00000628124 C1orf112Q9NSG2 853 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 SUCLA2Q9P2R7 463 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-216ENST00000628124 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.8□□□□□ -0.84
GABRB3-216ENST00000628124 FGD5Q6ZNL6 1462 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 MSH6P52701 1360 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 EFCAB14O75071 495 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 MBD4O95243 580 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 CALCRLQ16602 461 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 MGARPQ8TDB4 240 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 TUBB6Q9BUF5 446 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 ANO3Q9BYT9 981 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 MID2Q9UJV3 735 aa9.8□□□□□ -0.84
GABRB3-216ENST00000628124 TAF11Q15544 211 aa9.79□□□□□ -0.84
GABRB3-216ENST00000628124 RIPOR2Q9Y4F9 1068 aa9.79□□□□□ -0.84
GABRB3-216ENST00000628124 TMEM247A6NEH6 219 aa9.79□□□□□ -0.84
GABRB3-216ENST00000628124 GSTA4O15217 222 aa9.79□□□□□ -0.84
GABRB3-216ENST00000628124 NLRP12P59046 1061 aa9.79□□□□□ -0.84
GABRB3-216ENST00000628124 SCYL2Q6P3W7 929 aa9.79□□□□□ -0.84
GABRB3-216ENST00000628124 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.79□□□□□ -0.84
GABRB3-216ENST00000628124 GLG1Q92896 1179 aa9.79□□□□□ -0.84
GABRB3-216ENST00000628124 AS3MTQ9HBK9 375 aa9.79□□□□□ -0.84
GABRB3-216ENST00000628124 WWC3Q9ULE0 1092 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms