RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 GUCD1Q96NT3 240 aa10.56□□□□□ -0.72
CHD2-212ENST00000627622 TLR7Q9NYK1 1049 aaKnown RBP10.56□□□□□ -0.72
CHD2-212ENST00000627622 PARP14Q460N5 1801 aa10.56□□□□□ -0.72
CHD2-212ENST00000627622 A0A0G2JMZ2 1700 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 STRNO43815 780 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 COL11A1P12107 1806 aaPredicted RBP10.55□□□□□ -0.72
CHD2-212ENST00000627622 CYBAP13498 195 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 SHMT1P34896 483 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 PLCD1P51178 756 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 RTP1P59025 263 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 ZKSCAN2Q63HK3 967 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 DPP9Q86TI2 863 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.55□□□□□ -0.72
CHD2-212ENST00000627622 ARRDC4Q8NCT1 418 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 COL25A1Q9BXS0 654 aaPredicted RBP10.55□□□□□ -0.72
CHD2-212ENST00000627622 PLXNA1Q9UIW2 1896 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 POLR3DP05423 398 aaPredicted RBP10.55□□□□□ -0.72
CHD2-212ENST00000627622 GUCY1A2P33402 732 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 COG2Q14746 738 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 GJC2Q5T442 439 aaPredicted RBP10.55□□□□□ -0.72
CHD2-212ENST00000627622 ZNF697Q5TEC3 545 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 OLFML2BQ68BL8 750 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 FAM161BQ96MY7 647 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 ANTXR1Q9H6X2 564 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 C1orf115Q9H7X2 142 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 HOXC10Q9NYD6 342 aa10.55□□□□□ -0.72
CHD2-212ENST00000627622 EYSQ5T1H1 3165 aa10.54□□□□□ -0.72
CHD2-212ENST00000627622 BAZ2AQ9UIF9 1905 aaKnown RBP10.54□□□□□ -0.72
CHD2-212ENST00000627622 ADORA2AP29274 412 aa10.54□□□□□ -0.72
CHD2-212ENST00000627622 SEPT2Q15019 361 aa10.54□□□□□ -0.72
CHD2-212ENST00000627622 SLC39A5Q6ZMH5 540 aa10.54□□□□□ -0.72
CHD2-212ENST00000627622 RIOK1Q9BRS2 568 aaKnown RBP10.54□□□□□ -0.72
CHD2-212ENST00000627622 MOV10L1Q9BXT6 1211 aaKnown RBP10.54□□□□□ -0.72
CHD2-212ENST00000627622 ATP11BQ9Y2G3 1177 aa10.54□□□□□ -0.72
CHD2-212ENST00000627622 A0A1W2PRG0 241 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 KBTBD13C9JR72 458 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 GABPAQ06546 454 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 SHCBP1Q8NEM2 672 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 TANGO6Q9C0B7 1094 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 SPATC1LQ9H0A9 340 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 SLC5A4Q9NY91 659 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 MAGEB6P1A0A0J9YX57 407 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 CCER2I3L3R5 266 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 MPHOSPH10O00566 681 aaKnown RBP10.53□□□□□ -0.72
CHD2-212ENST00000627622 SEPT4O43236 478 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 COBLO75128 1261 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 ERCC3P19447 782 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 SNX17Q15036 470 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 SHHQ15465 462 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 MB21D1Q8N884 522 aa10.53□□□□□ -0.72
CHD2-212ENST00000627622 TTF1Q15361 905 aaPredicted RBP10.52□□□□□ -0.73
CHD2-212ENST00000627622 ANO1Q5XXA6 986 aa10.52□□□□□ -0.73
CHD2-212ENST00000627622 FTSJ3Q8IY81 847 aaKnown RBP10.52□□□□□ -0.73
CHD2-212ENST00000627622 CRNKL1Q9BZJ0 848 aaKnown RBP10.52□□□□□ -0.73
CHD2-212ENST00000627622 SEMA6BQ9H3T3 888 aa10.52□□□□□ -0.73
CHD2-212ENST00000627622 MROH8Q9H579 483 aa10.52□□□□□ -0.73
CHD2-212ENST00000627622 PRDM5Q9NQX1 630 aaPredicted RBP10.52□□□□□ -0.73
CHD2-212ENST00000627622 MCM9Q9NXL9 1143 aa10.52□□□□□ -0.73
CHD2-212ENST00000627622 VCANP13611 3396 aa10.52□□□□□ -0.73
CHD2-212ENST00000627622 PRUNE2Q8WUY3 3088 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 MYH7P12883 1935 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 PLS1Q14651 629 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 TRIM60Q495X7 471 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 PRAMEF19Q5SWL8 479 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 C9orf50Q5SZB4 431 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 SLC9C2Q5TAH2 1124 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 C1orf53Q5VUE5 145 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 TMEM179Q6ZVK1 233 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 AACSQ86V21 672 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 ERC1Q8IUD2 1116 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 ITPRIPQ8IWB1 547 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 ABRAQ8N0Z2 381 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 BADQ92934 168 aa10.51□□□□□ -0.73
CHD2-212ENST00000627622 CDX2Q99626 313 aaPredicted RBP10.51□□□□□ -0.73
CHD2-212ENST00000627622 MYCNP04198 464 aaPredicted RBP10.5□□□□□ -0.73
CHD2-212ENST00000627622 PDE6AP16499 860 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 ADCYAP1R1P41586 468 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 SMAD3P84022 425 aaKnown RBP10.5□□□□□ -0.73
CHD2-212ENST00000627622 LRRC41Q15345 812 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 KIAA1755Q5JYT7 1200 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 CEP85Q6P2H3 762 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
CHD2-212ENST00000627622 NCAPG2Q86XI2 1143 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 FERMT2Q96AC1 680 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 MAML3Q96JK9 1138 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 DCP1AQ9NPI6 582 aaPredicted RBP10.5□□□□□ -0.73
CHD2-212ENST00000627622 PDLIM7Q9NR12 457 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 SWAP70Q9UH65 585 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 EXOC6BQ9Y2D4 811 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 CDH23Q9H251 3354 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 TRIM43BA6NCK2 446 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 FLOT1O75955 427 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 FCER1AP12319 257 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 SH3RF1Q7Z6J0 888 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 SDR42E1Q8WUS8 393 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 TRIM43Q96BQ3 446 aaPredicted RBP10.5□□□□□ -0.73
CHD2-212ENST00000627622 ATG4CQ96DT6 458 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 ARHGEF10LQ9HCE6 1279 aa10.5□□□□□ -0.73
CHD2-212ENST00000627622 ZNF532Q9HCE3 1301 aa10.49□□□□□ -0.73
CHD2-212ENST00000627622 SLC25A27O95847 323 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms