RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 EFHC2Q5JST6 749 aa6.3□□□□□ -1.4
RPRD1B-209ENST00000622494 SAMD5Q5TGI4 173 aa6.3□□□□□ -1.4
RPRD1B-209ENST00000622494 MOB2Q70IA6 237 aa6.3□□□□□ -1.4
RPRD1B-209ENST00000622494 USP48Q86UV5 1035 aa6.3□□□□□ -1.4
RPRD1B-209ENST00000622494 MYH16Q9H6N6 1097 aa6.3□□□□□ -1.4
RPRD1B-209ENST00000622494 CNOT7Q9UIV1 285 aaKnown RBP6.3□□□□□ -1.4
RPRD1B-209ENST00000622494 MINPP1Q9UNW1 487 aa6.3□□□□□ -1.4
RPRD1B-209ENST00000622494 FZD1Q9UP38 647 aa6.3□□□□□ -1.4
RPRD1B-209ENST00000622494 IRS2Q9Y4H2 1338 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 CDC14CA4D256 554 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 PLIN1O60240 522 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 SASH1O94885 1247 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 GRIK5Q16478 980 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 CYP4F22Q6NT55 531 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 LMBR1LQ6UX01 489 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 ANKRD18AQ8IVF6 992 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 ANKRD44Q8N8A2 993 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 JMYQ8N9B5 988 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 LINS1Q8NG48 757 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 RHPN1Q8TCX5 695 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 GGA1Q9UJY5 639 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 CNTNAP1P78357 1384 aa6.29□□□□□ -1.4
RPRD1B-209ENST00000622494 THSD7BQ9C0I4 1608 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 IQCA1LA6NCM1 817 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 F8W031 263 aaPredicted RBP6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 FOXN1O15353 648 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 CSF1RP07333 972 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 CCT4P50991 539 aaKnown RBP6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 CHRNDQ07001 517 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 NEXNQ0ZGT2 675 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 GAS6Q14393 721 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 LRRC24Q50LG9 513 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 ARSJQ5FYB0 599 aaPredicted RBP6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 FIGNL1Q6PIW4 674 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 CAPN12Q6ZSI9 719 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 CERS5Q8N5B7 392 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 GTPBP3Q969Y2 492 aaKnown RBP6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 GMLQ99445 158 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 CFHR5Q9BXR6 569 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 ZCCHC2Q9C0B9 1178 aaKnown RBP6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 BICC1Q9H694 974 aaKnown RBP6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.28□□□□□ -1.48e-8■■■■■ 44.9
RPRD1B-209ENST00000622494 LRFN2Q9ULH4 789 aa6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 ABT1Q9ULW3 272 aaKnown RBP6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.28□□□□□ -1.4
RPRD1B-209ENST00000622494 XDHP47989 1333 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 GRM8O00222 908 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 EFSO43281 561 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 WIPF1O43516 503 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 BNIP3LO60238 219 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 CELF2O95319 508 aaKnown RBP6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 FAM157BP0CG42 384 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 KRT76Q01546 638 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 HIF1AQ16665 826 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 NBPF9Q3BBW0 867 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 COX20Q5RI15 118 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 DACT2Q5SW24 774 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 IER5Q5VY09 327 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 SUPT20HQ8NEM7 779 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 VTI1AQ96AJ9 217 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 SUSD3Q96L08 255 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 ADARB2Q9NS39 739 aaKnown RBP6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 GGA3Q9NZ52 723 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 PODXL2Q9NZ53 605 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 HCN2Q9UL51 889 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 PCDHGC4Q9Y5F7 938 aa6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 COL1A1P02452 1464 aaPredicted RBP6.27□□□□□ -1.41
RPRD1B-209ENST00000622494 CASP8AP2Q9UKL3 1982 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 ARAP2Q8WZ64 1704 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 BCAR3O75815 825 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 CENPBP07199 599 aaPredicted RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 VIL1P09327 827 aaKnown RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 GMPRP36959 345 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 GYG1P46976 350 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 PRKG1Q13976 671 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 KIF4BQ2VIQ3 1234 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 RNFT1Q5M7Z0 435 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 ANGEL2Q5VTE6 544 aaKnown RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 B4GALNT3Q6L9W6 998 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 C16orf46Q6P387 395 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 LRRC69Q6ZNQ3 347 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 USP50Q70EL3 339 aaPredicted RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 KIAA0825Q8IV33 1275 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 ZNF280CQ8ND82 737 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 HSH2DQ96JZ2 352 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 MKNK1Q9BUB5 465 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 PLA2G12BQ9BX93 195 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 ZC3H12CQ9C0D7 883 aaKnown RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 SRCIN1Q9C0H9 1055 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 SAP130Q9H0E3 1048 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 TMX4Q9H1E5 349 aaPredicted RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 SMC4Q9NTJ3 1288 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 BSDC1Q9NW68 430 aaPredicted RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 DMGDHQ9UI17 866 aaKnown RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 ATXN7L1Q9ULK2 861 aaPredicted RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 NOB1Q9ULX3 412 aaKnown RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 PA2G4Q9UQ80 394 aaKnown RBP6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 MED23Q9ULK4 1368 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 OTOFQ9HC10 1997 aa6.26□□□□□ -1.41
RPRD1B-209ENST00000622494 ZNF804BA4D1E1 1349 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms