RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 C17orf99Q6UX52 265 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 LBX2Q6XYB7 198 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 TMEM179Q6ZVK1 233 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 TRMT44Q8IYL2 757 aaKnown RBP6.21□□□□□ -1.42
SHMT1-211ENST00000618902 RASEFQ8IZ41 740 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 FAM43AQ8N2R8 423 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 LPAR1Q92633 364 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 ABHD8Q96I13 439 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 C12orf42Q96LP6 360 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 MCOLN1Q9GZU1 580 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 EFCC1Q9HA90 598 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 IL17RBQ9NRM6 502 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 EMILIN3Q9NT22 766 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 TMOD4Q9NZQ9 345 aa6.21□□□□□ -1.42
SHMT1-211ENST00000618902 ISY1Q9ULR0 285 aaKnown RBP6.21□□□□□ -1.42
SHMT1-211ENST00000618902 RBM8AQ9Y5S9 174 aaKnown RBP6.21□□□□□ -1.42
SHMT1-211ENST00000618902 LAMA4Q16363 1823 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 PLIN4Q96Q06 1357 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 PDHXO00330 501 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 SLC27A2O14975 620 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 TBC1D8O95759 1140 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 FDX1P10109 184 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 LACTBP83111 547 aaPredicted RBP6.2□□□□□ -1.42
SHMT1-211ENST00000618902 PLCB2Q00722 1185 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 CAP1Q01518 475 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 IRF5Q13568 498 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 RAB3GAP1Q15042 981 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 NECTIN1Q15223 517 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 AKNAD1Q5T1N1 836 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 TREML2Q5T2D2 321 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 RCSD1Q6JBY9 416 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 RASGRP2Q7LDG7 609 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 MB21D1Q8N884 522 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 NEDD1Q8NHV4 660 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 PXYLP1Q8TE99 480 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 STAG1Q8WVM7 1258 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 RUFY2Q8WXA3 655 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 ARMC5Q96C12 935 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 KIAA1683Q9H0B3 1180 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 GPHNQ9NQX3 736 aaPredicted RBP6.2□□□□□ -1.42
SHMT1-211ENST00000618902 HOXC10Q9NYD6 342 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 TSKSQ9UJT2 592 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 MYH8P13535 1937 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 MYPNQ86TC9 1320 aa6.2□□□□□ -1.42
SHMT1-211ENST00000618902 B4E1Z4 1266 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 MPHOSPH10O00566 681 aaKnown RBP6.19□□□□□ -1.42
SHMT1-211ENST00000618902 RANBP6O60518 1105 aaKnown RBP6.19□□□□□ -1.42
SHMT1-211ENST00000618902 PEX10O60683 326 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 BCRP11274 1271 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 XRCC5P13010 732 aaKnown RBP6.19□□□□□ -1.42
SHMT1-211ENST00000618902 EEF2P13639 858 aaKnown RBP6.19□□□□□ -1.42
SHMT1-211ENST00000618902 COPB2P35606 906 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 NOVP48745 357 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 HMGCS2P54868 508 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 FCGRTP55899 365 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 ANTXR2P58335 489 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 CCNA1P78396 465 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 TFAP4Q01664 338 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 PDE4BQ07343 736 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 MTMR2Q13614 643 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 NFKBIBQ15653 356 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 L1TD1Q5T7N2 865 aaKnown RBP6.19□□□□□ -1.42
SHMT1-211ENST00000618902 CREB3L3Q68CJ9 461 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L2Q6R6M4 530 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 CYB5R4Q7L1T6 521 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 OTOP1Q7RTM1 612 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 SMCR8Q8TEV9 937 aaPredicted RBP6.19□□□□□ -1.42
SHMT1-211ENST00000618902 KCNB2Q92953 911 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 CEP95Q96GE4 821 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 MAF1Q9H063 256 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 KANSL2Q9H9L4 492 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 MKNK2Q9HBH9 465 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 SENP2Q9HC62 589 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 ANO2Q9NQ90 1003 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 MTMR4Q9NYA4 1195 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 MORF4L1Q9UBU8 362 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 PNMA2Q9UL42 364 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 PTPN22Q9Y2R2 807 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 ADGRA2Q96PE1 1338 aa6.19□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L15C9J2P7 530 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L13C9JLJ4 530 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L11C9JVI0 530 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L18D6R9N7 530 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L22D6RA61 530 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L17D6RBQ6 530 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L19D6RCP7 530 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L20D6RJB6 530 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 E7EWF7 191 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 ZNF213O14771 459 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 STRNO43815 780 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 MAPK4P31152 587 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 IRX3P78415 501 aaPredicted RBP6.18□□□□□ -1.42
SHMT1-211ENST00000618902 ICA1Q05084 483 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 USP17L24Q0WX57 530 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 ZYXQ15942 572 aaKnown RBP6.18□□□□□ -1.42
SHMT1-211ENST00000618902 IMMTQ16891 758 aaKnown RBP6.18□□□□□ -1.42
SHMT1-211ENST00000618902 ADCK5Q3MIX3 580 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 RRP12Q5JTH9 1297 aaKnown RBP6.18□□□□□ -1.42
SHMT1-211ENST00000618902 GADL1Q6ZQY3 521 aa6.18□□□□□ -1.42
SHMT1-211ENST00000618902 MFSD6Q6ZSS7 791 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms