RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TLR2O60603 784 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 NT5C2P49902 561 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 PRMT2P55345 433 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 COL9A3Q14050 684 aaPredicted RBP22.25■■□□□ 1.15
CCDC9-205ENST00000600117 CLEC10AQ8IUN9 316 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 ESR2Q92731 530 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 BACH2Q9BYV9 841 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 KRT23Q9C075 422 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 ZCCHC17Q9NP64 241 aaKnown RBP22.25■■□□□ 1.15
CCDC9-205ENST00000600117 SNX14Q9Y5W7 946 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 ZHX2Q9Y6X8 837 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 TSPY2A6NKD2 308 aa22.24■■□□□ 1.15
CCDC9-205ENST00000600117 KDM4AO75164 1064 aa22.24■■□□□ 1.15
CCDC9-205ENST00000600117 TSPY3P0CV98 308 aa22.24■■□□□ 1.15
CCDC9-205ENST00000600117 TSPY8P0CW00 308 aa22.24■■□□□ 1.15
CCDC9-205ENST00000600117 LACTBP83111 547 aaPredicted RBP22.24■■□□□ 1.15
CCDC9-205ENST00000600117 PPIL2Q13356 520 aa22.24■■□□□ 1.15
CCDC9-205ENST00000600117 RAB3GAP1Q15042 981 aa22.24■■□□□ 1.15
CCDC9-205ENST00000600117 SIAH1Q8IUQ4 282 aa22.24■■□□□ 1.15
CCDC9-205ENST00000600117 WDR18Q9BV38 432 aa22.24■■□□□ 1.15
CCDC9-205ENST00000600117 ARHGAP39Q9C0H5 1083 aa22.24■■□□□ 1.15
CCDC9-205ENST00000600117 AFG3L2Q9Y4W6 797 aa22.24■■□□□ 1.15
CCDC9-205ENST00000600117 ZKSCAN1P17029 563 aaPredicted RBP22.23■■□□□ 1.15
CCDC9-205ENST00000600117 MCCP23508 829 aa22.23■■□□□ 1.15
CCDC9-205ENST00000600117 ADCK5Q3MIX3 580 aa22.23■■□□□ 1.15
CCDC9-205ENST00000600117 MB21D2Q8IYB1 491 aaPredicted RBP22.23■■□□□ 1.15
CCDC9-205ENST00000600117 NCOA7Q8NI08 942 aa22.23■■□□□ 1.15
CCDC9-205ENST00000600117 DPF3Q92784 378 aa22.23■■□□□ 1.15
CCDC9-205ENST00000600117 TBC1D2Q9BYX2 928 aa22.23■■□□□ 1.15
CCDC9-205ENST00000600117 IL17RBQ9NRM6 502 aa22.23■■□□□ 1.15
CCDC9-205ENST00000600117 ZSWIM5Q9P217 1185 aa22.23■■□□□ 1.15
CCDC9-205ENST00000600117 DLL1O00548 723 aa22.22■■□□□ 1.15
CCDC9-205ENST00000600117 IRF6O14896 467 aa22.22■■□□□ 1.15
CCDC9-205ENST00000600117 TRDNQ13061 729 aa22.22■■□□□ 1.15
CCDC9-205ENST00000600117 CYB5R4Q7L1T6 521 aa22.22■■□□□ 1.15
CCDC9-205ENST00000600117 SHISA4Q96DD7 197 aa22.22■■□□□ 1.15
CCDC9-205ENST00000600117 CEP95Q96GE4 821 aa22.22■■□□□ 1.15
CCDC9-205ENST00000600117 KANSL2Q9H9L4 492 aa22.22■■□□□ 1.15
CCDC9-205ENST00000600117 TCP11L1Q9NUJ3 509 aa22.22■■□□□ 1.15
CCDC9-205ENST00000600117 KCNH4Q9UQ05 1017 aa22.22■■□□□ 1.15
CCDC9-205ENST00000600117 PTPRFP10586 1907 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 NMT2O60551 498 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 CETPP11597 493 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 NOVP48745 357 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 ANTXR2P58335 489 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 ICA1Q05084 483 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 KRT32Q14532 448 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 RALYLQ86SE5 291 aaKnown RBP22.21■■□□□ 1.15
CCDC9-205ENST00000600117 ZNF280CQ8ND82 737 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 ACER1Q8TDN7 264 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 AS3MTQ9HBK9 375 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 MTMR4Q9NYA4 1195 aa22.21■■□□□ 1.15
CCDC9-205ENST00000600117 A0A1W2PRG0 241 aa22.2■■□□□ 1.14
CCDC9-205ENST00000600117 SPP2Q13103 211 aa22.2■■□□□ 1.14
CCDC9-205ENST00000600117 SLC17A8Q8NDX2 589 aa22.2■■□□□ 1.14
CCDC9-205ENST00000600117 IL17RAQ96F46 866 aa22.2■■□□□ 1.14
CCDC9-205ENST00000600117 PRO3102Q9H379 93 aa22.2■■□□□ 1.14
CCDC9-205ENST00000600117 NYAP2Q9P242 653 aa22.2■■□□□ 1.14
CCDC9-205ENST00000600117 CXCL11O14625 94 aa22.19■■□□□ 1.14
CCDC9-205ENST00000600117 EEF2P13639 858 aaKnown RBP22.19■■□□□ 1.14
CCDC9-205ENST00000600117 MTFR1Q15390 333 aa22.19■■□□□ 1.14
CCDC9-205ENST00000600117 NEK1Q96PY6 1258 aa22.19■■□□□ 1.14
CCDC9-205ENST00000600117 TRIM75PA6NK02 468 aa22.18■■□□□ 1.14
CCDC9-205ENST00000600117 BTBD19C9JJ37 291 aa22.18■■□□□ 1.14
CCDC9-205ENST00000600117 RCSD1Q6JBY9 416 aa22.18■■□□□ 1.14
CCDC9-205ENST00000600117 ZKSCAN3Q9BRR0 538 aa22.18■■□□□ 1.14
CCDC9-205ENST00000600117 HTATIP2Q9BUP3 242 aa22.18■■□□□ 1.14
CCDC9-205ENST00000600117 MYH4Q9Y623 1939 aa22.18■■□□□ 1.14
CCDC9-205ENST00000600117 A0A0G2JLL6 359 aaPredicted RBP22.17■■□□□ 1.14
CCDC9-205ENST00000600117 TTLL1O95922 423 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 BACE1P56817 501 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 ANAPC15P60006 121 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 SNAPC2Q13487 334 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 MTMR2Q13614 643 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 MOGSQ13724 837 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 SH3D19Q5HYK7 790 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 PRRT2Q7Z6L0 340 aaPredicted RBP22.17■■□□□ 1.14
CCDC9-205ENST00000600117 UBE2Q1Q7Z7E8 422 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 MKL1Q969V6 931 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 JAKMIP1Q96N16 626 aaKnown RBP22.17■■□□□ 1.14
CCDC9-205ENST00000600117 ZSCAN10Q96SZ4 725 aaPredicted RBP22.17■■□□□ 1.14
CCDC9-205ENST00000600117 KIAA1683Q9H0B3 1180 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 ARHGEF10LQ9HCE6 1279 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 TMX2Q9Y320 296 aa22.17■■□□□ 1.14
CCDC9-205ENST00000600117 USP17L10C9JJH3 530 aa22.16■■□□□ 1.14
CCDC9-205ENST00000600117 EXOSC10Q01780 885 aaKnown RBP22.16■■□□□ 1.14
CCDC9-205ENST00000600117 SEC23AQ15436 765 aa22.16■■□□□ 1.14
CCDC9-205ENST00000600117 C17orf99Q6UX52 265 aa22.16■■□□□ 1.14
CCDC9-205ENST00000600117 CHST3Q7LGC8 479 aa22.16■■□□□ 1.14
CCDC9-205ENST00000600117 IQCA1Q86XH1 822 aa22.16■■□□□ 1.14
CCDC9-205ENST00000600117 ANKS1AQ92625 1134 aa22.16■■□□□ 1.14
CCDC9-205ENST00000600117 CLIP2Q9UDT6 1046 aa22.16■■□□□ 1.14
CCDC9-205ENST00000600117 SRRDQ9UH36 339 aa22.16■■□□□ 1.14
CCDC9-205ENST00000600117 LOC285556D6RIA3 1793 aa22.16■■□□□ 1.14
CCDC9-205ENST00000600117 TNKSO95271 1327 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 PRC1O43663 620 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 GJB1P08034 283 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 MCM5P33992 734 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 GJA8P48165 433 aa22.15■■□□□ 1.14
CCDC9-205ENST00000600117 ATP2B2Q01814 1243 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms